RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 RAP2BP61225 183 aa9.93□□□□□ -0.82
PCNX4-209ENST00000555569 RRAS2P62070 204 aaPredicted RBP9.93□□□□□ -0.82
PCNX4-209ENST00000555569 SELENOTP62341 195 aa9.93□□□□□ -0.82
PCNX4-209ENST00000555569 C12orf74Q32Q52 190 aa9.93□□□□□ -0.82
PCNX4-209ENST00000555569 FAM78BQ5VT40 261 aa9.93□□□□□ -0.82
PCNX4-209ENST00000555569 ZNF709Q8N972 641 aa9.93□□□□□ -0.82
PCNX4-209ENST00000555569 OR10P1Q8NGE3 313 aa9.93□□□□□ -0.82
PCNX4-209ENST00000555569 C17orf77Q96MU5 243 aa9.93□□□□□ -0.82
PCNX4-209ENST00000555569 SCRT1Q9BWW7 348 aa9.93□□□□□ -0.82
PCNX4-209ENST00000555569 SLC25A39Q9BZJ4 359 aaPredicted RBP9.93□□□□□ -0.82
PCNX4-209ENST00000555569 SLC35B3Q9H1N7 401 aa9.93□□□□□ -0.82
PCNX4-209ENST00000555569 GSKIPQ9P0R6 139 aa9.93□□□□□ -0.82
PCNX4-209ENST00000555569 HIGD1AQ9Y241 93 aa9.93□□□□□ -0.82
PCNX4-209ENST00000555569 RCL1Q9Y2P8 373 aaKnown RBP9.93□□□□□ -0.82
PCNX4-209ENST00000555569 IGHV3OR16-12A0A075B7B8 117 aa9.92□□□□□ -0.82
PCNX4-209ENST00000555569 TMEM189A5PLL7 270 aa9.92□□□□□ -0.82
PCNX4-209ENST00000555569 HYPMO75409 117 aa9.92□□□□□ -0.82
PCNX4-209ENST00000555569 LINC00869P0C866 280 aa9.92□□□□□ -0.82
PCNX4-209ENST00000555569 PLP1P60201 277 aa9.92□□□□□ -0.82
PCNX4-209ENST00000555569 ZNF767PQ75MW2 155 aa9.92□□□□□ -0.82
PCNX4-209ENST00000555569 SHANK2-AS3Q9BTD1 123 aa9.92□□□□□ -0.82
PCNX4-209ENST00000555569 NPVFQ9HCQ7 196 aa9.92□□□□□ -0.82
PCNX4-209ENST00000555569 MGAT4CQ9UBM8 478 aa9.92□□□□□ -0.82
PCNX4-209ENST00000555569 RFNGQ9Y644 331 aa9.92□□□□□ -0.82
PCNX4-209ENST00000555569 BIRC6Q9NR09 4857 aa9.91□□□□□ -0.82
PCNX4-209ENST00000555569 IGHV4-4A0A075B6R2 117 aa9.91□□□□□ -0.82
PCNX4-209ENST00000555569 DEFB131BA0A096LNP1 70 aa9.91□□□□□ -0.82
PCNX4-209ENST00000555569 A8MTW9 85 aa9.91□□□□□ -0.82
PCNX4-209ENST00000555569 CCSO14618 274 aa9.91□□□□□ -0.82
PCNX4-209ENST00000555569 MBPP02686 304 aaPredicted RBP9.91□□□□□ -0.82
PCNX4-209ENST00000555569 TCRBP04435 133 aa9.91□□□□□ -0.82
PCNX4-209ENST00000555569 OR5G3P0C626 314 aa9.91□□□□□ -0.82
PCNX4-209ENST00000555569 RPL7P18124 248 aaKnown RBP9.91□□□□□ -0.82
PCNX4-209ENST00000555569 TEPPQ6URK8 271 aa9.91□□□□□ -0.82
PCNX4-209ENST00000555569 S100A7AQ86SG5 101 aa9.91□□□□□ -0.82
PCNX4-209ENST00000555569 RNF126Q9BV68 326 aa9.91□□□□□ -0.82
PCNX4-209ENST00000555569 GOLT1BQ9Y3E0 138 aa9.91□□□□□ -0.82
PCNX4-209ENST00000555569 TRAV6A0A075B6T7 132 aa9.9□□□□□ -0.82
PCNX4-209ENST00000555569 TRAV8-2A0A0B4J237 113 aa9.9□□□□□ -0.82
PCNX4-209ENST00000555569 LOC100996750A0A140TA64 210 aa9.9□□□□□ -0.82
PCNX4-209ENST00000555569 K7EPK0 472 aa9.9□□□□□ -0.82
PCNX4-209ENST00000555569 SPART-AS1P0CW21 52 aa9.9□□□□□ -0.82
PCNX4-209ENST00000555569 EMP1P54849 157 aa9.9□□□□□ -0.82
PCNX4-209ENST00000555569 PRR20EP86478 221 aa9.9□□□□□ -0.82
PCNX4-209ENST00000555569 PRR20CP86479 221 aa9.9□□□□□ -0.82
PCNX4-209ENST00000555569 PRR20DP86480 221 aa9.9□□□□□ -0.82
PCNX4-209ENST00000555569 PRR20BP86481 221 aa9.9□□□□□ -0.82
PCNX4-209ENST00000555569 PRR20AP86496 221 aa9.9□□□□□ -0.82
PCNX4-209ENST00000555569 FGL1Q08830 312 aa9.9□□□□□ -0.82
PCNX4-209ENST00000555569 ZNF846Q147U1 533 aa9.9□□□□□ -0.82
PCNX4-209ENST00000555569 IGFL4Q6B9Z1 124 aa9.9□□□□□ -0.82
PCNX4-209ENST00000555569 KRTAP4-6Q9BYQ5 205 aa9.9□□□□□ -0.82
PCNX4-209ENST00000555569 VPS13DQ5THJ4 4388 aa9.89□□□□□ -0.83
PCNX4-209ENST00000555569 C7orf66A4D0T2 115 aa9.89□□□□□ -0.83
PCNX4-209ENST00000555569 L7N2F9 121 aa9.89□□□□□ -0.83
PCNX4-209ENST00000555569 DUSP14O95147 198 aaKnown RBP9.89□□□□□ -0.83
PCNX4-209ENST00000555569 VAMP2P63027 116 aa9.89□□□□□ -0.83
PCNX4-209ENST00000555569 SLC38A11Q08AI6 406 aa9.89□□□□□ -0.83
PCNX4-209ENST00000555569 ARL16Q0P5N6 197 aa9.89□□□□□ -0.83
PCNX4-209ENST00000555569 DMRTA1Q5VZB9 504 aa9.89□□□□□ -0.83
PCNX4-209ENST00000555569 AMTNQ6UX39 209 aa9.89□□□□□ -0.83
PCNX4-209ENST00000555569 C1orf158Q8N1D5 194 aa9.89□□□□□ -0.83
PCNX4-209ENST00000555569 RNF182Q8N6D2 247 aa9.89□□□□□ -0.83
PCNX4-209ENST00000555569 ZNF431Q8TF32 576 aaPredicted RBP9.89□□□□□ -0.83
PCNX4-209ENST00000555569 UHRF2Q96PU4 802 aa9.89□□□□□ -0.83
PCNX4-209ENST00000555569 SEC22CQ9BRL7 303 aa9.89□□□□□ -0.83
PCNX4-209ENST00000555569 CCDC32Q9BV29 185 aa9.89□□□□□ -0.83
PCNX4-209ENST00000555569 GGACTQ9BVM4 153 aa9.89□□□□□ -0.83
PCNX4-209ENST00000555569 ARL6Q9H0F7 186 aa9.89□□□□□ -0.83
PCNX4-209ENST00000555569 A0A087X0K7 114 aa9.88□□□□□ -0.83
PCNX4-209ENST00000555569 TEX48A0A1B0GUV7 120 aa9.88□□□□□ -0.83
PCNX4-209ENST00000555569 C5orf51A6NDU8 294 aa9.88□□□□□ -0.83
PCNX4-209ENST00000555569 FAM25EA8MYX2 175 aa9.88□□□□□ -0.83
PCNX4-209ENST00000555569 GOSR2O14653 212 aa9.88□□□□□ -0.83
PCNX4-209ENST00000555569 HBE1P02100 147 aa9.88□□□□□ -0.83
PCNX4-209ENST00000555569 AMBPP02760 352 aa9.88□□□□□ -0.83
PCNX4-209ENST00000555569 CNN1P51911 297 aaKnown RBP9.88□□□□□ -0.83
PCNX4-209ENST00000555569 PXDC1Q5TGL8 231 aa9.88□□□□□ -0.83
PCNX4-209ENST00000555569 PATE2Q6UY27 113 aa9.88□□□□□ -0.83
PCNX4-209ENST00000555569 ZNF546Q86UE3 836 aa9.88□□□□□ -0.83
PCNX4-209ENST00000555569 ZNF738Q8NE65 137 aa9.88□□□□□ -0.83
PCNX4-209ENST00000555569 OR11H7Q8NGC8 314 aa9.88□□□□□ -0.83
PCNX4-209ENST00000555569 IGF2BP2-AS1Q96M15 143 aa9.88□□□□□ -0.83
PCNX4-209ENST00000555569 ARV1Q9H2C2 271 aa9.88□□□□□ -0.83
PCNX4-209ENST00000555569 NUDT15Q9NV35 164 aa9.88□□□□□ -0.83
PCNX4-209ENST00000555569 RNF24Q9Y225 148 aa9.88□□□□□ -0.83
PCNX4-209ENST00000555569 LSM5Q9Y4Y9 91 aaKnown RBP9.88□□□□□ -0.83
PCNX4-209ENST00000555569 FRAS1Q86XX4 4008 aa9.87□□□□□ -0.83
PCNX4-209ENST00000555569 LOC102723971A0A1B0GUV8 181 aa9.87□□□□□ -0.83
PCNX4-209ENST00000555569 AGPAT2O15120 278 aa9.87□□□□□ -0.83
PCNX4-209ENST00000555569 H2AFB2P0C5Z0 115 aa9.87□□□□□ -0.83
PCNX4-209ENST00000555569 RRN3P1Q2M238 152 aa9.87□□□□□ -0.83
PCNX4-209ENST00000555569 FAM222AQ5U5X8 452 aa9.87□□□□□ -0.83
PCNX4-209ENST00000555569 C12orf45Q8N5I9 185 aaPredicted RBP9.87□□□□□ -0.83
PCNX4-209ENST00000555569 DKK2Q9UBU2 259 aa9.87□□□□□ -0.83
PCNX4-209ENST00000555569 DNAH6Q9C0G6 4158 aa9.86□□□□□ -0.83
PCNX4-209ENST00000555569 M0R2Z0 102 aa9.86□□□□□ -0.83
PCNX4-209ENST00000555569 BCAP31P51572 246 aa9.86□□□□□ -0.83
PCNX4-209ENST00000555569 SPINK13Q1W4C9 94 aa9.86□□□□□ -0.83
PCNX4-209ENST00000555569 LRRC20Q8TCA0 184 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms