RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 ATF4P18848 351 aaPredicted RBP7.82□□□□□ -1.16
NEK9-205ENST00000555405 NDUFA5Q16718 116 aa7.82□□□□□ -1.16
NEK9-205ENST00000555405 KHDC3LQ587J8 217 aa7.82□□□□□ -1.16
NEK9-205ENST00000555405 EXOC3-AS1Q8N2X6 119 aa7.82□□□□□ -1.16
NEK9-205ENST00000555405 ELOVL1Q9BW60 279 aa7.82□□□□□ -1.16
NEK9-205ENST00000555405 RHPN1-AS1Q9BWJ2 59 aa7.82□□□□□ -1.16
NEK9-205ENST00000555405 C11orf94C9JXX5 98 aa7.82□□□□□ -1.16
NEK9-205ENST00000555405 F8W036 122 aa7.82□□□□□ -1.16
NEK9-205ENST00000555405 CCL24O00175 119 aa7.82□□□□□ -1.16
NEK9-205ENST00000555405 MBD3L1Q8WWY6 194 aa7.82□□□□□ -1.16
NEK9-205ENST00000555405 DLX4Q92988 240 aaPredicted RBP7.82□□□□□ -1.16
NEK9-205ENST00000555405 LINC00052Q96N35 136 aa7.82□□□□□ -1.16
NEK9-205ENST00000555405 MED9Q9NWA0 146 aa7.82□□□□□ -1.16
NEK9-205ENST00000555405 LINC01619G3V211 115 aa7.81□□□□□ -1.16
NEK9-205ENST00000555405 H3BQ15 152 aa7.81□□□□□ -1.16
NEK9-205ENST00000555405 CDX1P47902 265 aaPredicted RBP7.81□□□□□ -1.16
NEK9-205ENST00000555405 PROK1P58294 105 aa7.81□□□□□ -1.16
NEK9-205ENST00000555405 PEA15Q15121 130 aa7.81□□□□□ -1.16
NEK9-205ENST00000555405 PQLC2Q6ZP29 291 aa7.81□□□□□ -1.16
NEK9-205ENST00000555405 MRPL27Q9P0M9 148 aaKnown RBP7.81□□□□□ -1.16
NEK9-205ENST00000555405 SLC25A5P05141 298 aaKnown RBP7.81□□□□□ -1.16
NEK9-205ENST00000555405 HLA-DMBP28068 263 aa7.81□□□□□ -1.16
NEK9-205ENST00000555405 GNG5P63218 68 aa7.81□□□□□ -1.16
NEK9-205ENST00000555405 COMMD1Q8N668 190 aa7.81□□□□□ -1.16
NEK9-205ENST00000555405 ZNF503Q96F45 646 aa7.81□□□□□ -1.16
NEK9-205ENST00000555405 RNF2Q99496 336 aa7.81□□□□□ -1.16
NEK9-205ENST00000555405 SHANK2-AS3Q9BTD1 123 aa7.81□□□□□ -1.16
NEK9-205ENST00000555405 YTHDF2Q9Y5A9 579 aaKnown RBP7.81□□□□□ -1.16
NEK9-205ENST00000555405 TSSC4Q9Y5U2 329 aaPredicted RBP7.81□□□□□ -1.16
NEK9-205ENST00000555405 WI2-2373I1.2A0A1W2PRP0 233 aa7.8□□□□□ -1.16
NEK9-205ENST00000555405 LINC00862A6NCI5 91 aa7.8□□□□□ -1.16
NEK9-205ENST00000555405 M0R3E3 92 aa7.8□□□□□ -1.16
NEK9-205ENST00000555405 DPPA3Q6W0C5 159 aa7.8□□□□□ -1.16
NEK9-205ENST00000555405 C3orf56Q8N813 242 aa7.8□□□□□ -1.16
NEK9-205ENST00000555405 FAM167A-AS1Q96KT0 104 aa7.8□□□□□ -1.16
NEK9-205ENST00000555405 FAM210AQ96ND0 272 aa7.8□□□□□ -1.16
NEK9-205ENST00000555405 ZFAND3Q9H8U3 227 aa7.8□□□□□ -1.16
NEK9-205ENST00000555405 TRAV34A0A0B4J273 112 aa7.8□□□□□ -1.16
NEK9-205ENST00000555405 SEC14L6B5MCN3 397 aa7.8□□□□□ -1.16
NEK9-205ENST00000555405 DNASE2O00115 360 aaPredicted RBP7.8□□□□□ -1.16
NEK9-205ENST00000555405 NDUFA4O00483 81 aa7.8□□□□□ -1.16
NEK9-205ENST00000555405 BCL2P10415 239 aa7.8□□□□□ -1.16
NEK9-205ENST00000555405 KRTAP10-3P60369 221 aa7.8□□□□□ -1.16
NEK9-205ENST00000555405 FOXL1Q12952 345 aa7.8□□□□□ -1.16
NEK9-205ENST00000555405 ICAM4Q14773 271 aa7.8□□□□□ -1.16
NEK9-205ENST00000555405 KRTAP24-1Q3LI83 254 aa7.8□□□□□ -1.16
NEK9-205ENST00000555405 CYB561D1Q8N8Q1 229 aa7.8□□□□□ -1.16
NEK9-205ENST00000555405 DYNLRB2Q8TF09 96 aa7.8□□□□□ -1.16
NEK9-205ENST00000555405 RAX2Q96IS3 184 aa7.8□□□□□ -1.16
NEK9-205ENST00000555405 MRPL32Q9BYC8 188 aaKnown RBP7.8□□□□□ -1.16
NEK9-205ENST00000555405 VWFP04275 2813 aa7.8□□□□□ -1.16
NEK9-205ENST00000555405 ZP3P21754 424 aa7.8□□□□□ -1.16
NEK9-205ENST00000555405 CRYBB3P26998 211 aa7.8□□□□□ -1.16
NEK9-205ENST00000555405 DEFB1P60022 68 aa7.8□□□□□ -1.16
NEK9-205ENST00000555405 S100A7AQ86SG5 101 aa7.8□□□□□ -1.16
NEK9-205ENST00000555405 PRIMA1Q86XR5 153 aa7.8□□□□□ -1.16
NEK9-205ENST00000555405 CMTM2Q8TAZ6 248 aa7.8□□□□□ -1.16
NEK9-205ENST00000555405 C19orf24Q9BVV8 132 aa7.8□□□□□ -1.16
NEK9-205ENST00000555405 DAZ1Q9NQZ3 744 aaKnown RBP7.8□□□□□ -1.16
NEK9-205ENST00000555405 FBN1P35555 2871 aaKnown RBP7.8□□□□□ -1.16
NEK9-205ENST00000555405 H3BRN7 92 aa7.79□□□□□ -1.16
NEK9-205ENST00000555405 M0QZ24 198 aa7.79□□□□□ -1.16
NEK9-205ENST00000555405 FAM209BQ5JX69 171 aa7.79□□□□□ -1.16
NEK9-205ENST00000555405 RNF182Q8N6D2 247 aa7.79□□□□□ -1.16
NEK9-205ENST00000555405 TMEM167BQ9NRX6 74 aa7.79□□□□□ -1.16
NEK9-205ENST00000555405 NOTCH1P46531 2555 aa7.79□□□□□ -1.16
NEK9-205ENST00000555405 J3KRW8 73 aa7.79□□□□□ -1.16
NEK9-205ENST00000555405 SFTA3P0C7M3 94 aa7.79□□□□□ -1.16
NEK9-205ENST00000555405 RPL7P18124 248 aaKnown RBP7.79□□□□□ -1.16
NEK9-205ENST00000555405 GUCA2BQ16661 112 aa7.79□□□□□ -1.16
NEK9-205ENST00000555405 AWAT1Q58HT5 328 aa7.79□□□□□ -1.16
NEK9-205ENST00000555405 SOHLH1Q5JUK2 328 aa7.79□□□□□ -1.16
NEK9-205ENST00000555405 WFDC12Q8WWY7 111 aa7.79□□□□□ -1.16
NEK9-205ENST00000555405 LINC00479Q96M42 142 aa7.79□□□□□ -1.16
NEK9-205ENST00000555405 ZNF586Q9NXT0 402 aa7.79□□□□□ -1.16
NEK9-205ENST00000555405 M0R036 132 aa7.79□□□□□ -1.16
NEK9-205ENST00000555405 NDUFB4O95168 129 aa7.79□□□□□ -1.16
NEK9-205ENST00000555405 GALR1P47211 349 aa7.79□□□□□ -1.16
NEK9-205ENST00000555405 TCF24Q7RTU0 167 aa7.79□□□□□ -1.16
NEK9-205ENST00000555405 TMEM190Q8WZ59 177 aa7.79□□□□□ -1.16
NEK9-205ENST00000555405 GRAMD2BQ96HH9 432 aa7.79□□□□□ -1.16
NEK9-205ENST00000555405 C16orf92Q96LL3 132 aa7.79□□□□□ -1.16
NEK9-205ENST00000555405 C16orf95Q9H693 158 aa7.79□□□□□ -1.16
NEK9-205ENST00000555405 VAX2Q9UIW0 290 aa7.79□□□□□ -1.16
NEK9-205ENST00000555405 SCO2A0A1W2PP80 73 aa7.78□□□□□ -1.16
NEK9-205ENST00000555405 ZNF705FA8MVS1 300 aaPredicted RBP7.78□□□□□ -1.16
NEK9-205ENST00000555405 SLC17A3O00476 420 aa7.78□□□□□ -1.16
NEK9-205ENST00000555405 BUB3O43684 328 aa7.78□□□□□ -1.16
NEK9-205ENST00000555405 ZNF705DP0CH99 300 aaPredicted RBP7.78□□□□□ -1.16
NEK9-205ENST00000555405 ZNF705BP0CI00 300 aaPredicted RBP7.78□□□□□ -1.16
NEK9-205ENST00000555405 FOLR2P14207 255 aa7.78□□□□□ -1.16
NEK9-205ENST00000555405 AKR1C3P42330 323 aa7.78□□□□□ -1.16
NEK9-205ENST00000555405 MEF2BQ02080 365 aaPredicted RBP7.78□□□□□ -1.16
NEK9-205ENST00000555405 MGAM2Q2M2H8 2515 aa7.78□□□□□ -1.16
NEK9-205ENST00000555405 TMEM89A2RUT3 159 aa7.78□□□□□ -1.16
NEK9-205ENST00000555405 SAP30O75446 220 aa7.78□□□□□ -1.16
NEK9-205ENST00000555405 NDUFA7O95182 113 aa7.78□□□□□ -1.16
NEK9-205ENST00000555405 IGKV3-20P01619 116 aa7.78□□□□□ -1.16
NEK9-205ENST00000555405 HIST1H1EP10412 219 aaKnown RBP7.78□□□□□ -1.16
NEK9-205ENST00000555405 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms