RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 TRAV2A0A0B4J234 112 aa10.73□□□□□ -0.69
CHD8-208ENST00000555301 DNASE2O00115 360 aaPredicted RBP10.73□□□□□ -0.69
CHD8-208ENST00000555301 MBP02144 154 aa10.73□□□□□ -0.69
CHD8-208ENST00000555301 M6PRP20645 277 aa10.73□□□□□ -0.69
CHD8-208ENST00000555301 GCSAMLQ5JQS6 135 aa10.73□□□□□ -0.69
CHD8-208ENST00000555301 FAM78BQ5VT40 261 aa10.73□□□□□ -0.69
CHD8-208ENST00000555301 LEMD1Q68G75 181 aa10.73□□□□□ -0.69
CHD8-208ENST00000555301 GTSCR1Q86UQ5 136 aa10.73□□□□□ -0.69
CHD8-208ENST00000555301 MRPL32Q9BYC8 188 aaKnown RBP10.73□□□□□ -0.69
CHD8-208ENST00000555301 MS4A6AQ9H2W1 248 aa10.73□□□□□ -0.69
CHD8-208ENST00000555301 MGAM2Q2M2H8 2515 aa10.73□□□□□ -0.69
CHD8-208ENST00000555301 PKD1L1Q8TDX9 2849 aa10.72□□□□□ -0.69
CHD8-208ENST00000555301 BPIFA4PQ86YQ2 179 aa10.72□□□□□ -0.69
CHD8-208ENST00000555301 C9orf62Q8N4C0 152 aa10.72□□□□□ -0.69
CHD8-208ENST00000555301 STXBP6Q8NFX7 210 aa10.72□□□□□ -0.69
CHD8-208ENST00000555301 SH3BGRL3Q9H299 93 aa10.72□□□□□ -0.69
CHD8-208ENST00000555301 SLC25A32Q9H2D1 315 aa10.72□□□□□ -0.69
CHD8-208ENST00000555301 NRN1Q9NPD7 142 aa10.72□□□□□ -0.69
CHD8-208ENST00000555301 TPT1P13693 172 aaKnown RBP10.71□□□□□ -0.69
CHD8-208ENST00000555301 RHOBP62745 196 aa10.71□□□□□ -0.69
CHD8-208ENST00000555301 SAMD13Q5VXD3 122 aa10.71□□□□□ -0.69
CHD8-208ENST00000555301 BAP18Q8IXM2 172 aa10.71□□□□□ -0.69
CHD8-208ENST00000555301 GBGT1Q8N5D6 347 aa10.71□□□□□ -0.69
CHD8-208ENST00000555301 STOML3Q8TAV4 291 aa10.71□□□□□ -0.69
CHD8-208ENST00000555301 SEPSECSQ9HD40 501 aaKnown RBP10.71□□□□□ -0.69
CHD8-208ENST00000555301 FUT9Q9Y231 359 aa10.71□□□□□ -0.69
CHD8-208ENST00000555301 RFNGQ9Y644 331 aa10.71□□□□□ -0.69
CHD8-208ENST00000555301 A0A1W2PPV4 95 aa10.7□□□□□ -0.7
CHD8-208ENST00000555301 SEC11BP0C7V7 166 aa10.7□□□□□ -0.7
CHD8-208ENST00000555301 SPP1P10451 314 aa10.7□□□□□ -0.7
CHD8-208ENST00000555301 ATF4P18848 351 aaPredicted RBP10.7□□□□□ -0.7
CHD8-208ENST00000555301 TFPI2P48307 235 aa10.7□□□□□ -0.7
CHD8-208ENST00000555301 MEOX2P50222 304 aa10.7□□□□□ -0.7
CHD8-208ENST00000555301 CMC4P56277 68 aaPredicted RBP10.7□□□□□ -0.7
CHD8-208ENST00000555301 MORN5Q5VZ52 161 aa10.7□□□□□ -0.7
CHD8-208ENST00000555301 SLC51BQ86UW2 128 aa10.7□□□□□ -0.7
CHD8-208ENST00000555301 WFDC3Q8IUB2 231 aa10.7□□□□□ -0.7
CHD8-208ENST00000555301 OR10G4Q8NGN3 311 aa10.7□□□□□ -0.7
CHD8-208ENST00000555301 OR10G9Q8NGN4 311 aa10.7□□□□□ -0.7
CHD8-208ENST00000555301 OR10G7Q8NGN6 311 aa10.7□□□□□ -0.7
CHD8-208ENST00000555301 PRR25Q96S07 402 aa10.7□□□□□ -0.7
CHD8-208ENST00000555301 NOTCH3Q9UM47 2321 aa10.7□□□□□ -0.7
CHD8-208ENST00000555301 TRAV5A0A0B4J249 113 aa10.69□□□□□ -0.7
CHD8-208ENST00000555301 K7EQG2 157 aa10.69□□□□□ -0.7
CHD8-208ENST00000555301 TAS2R45P59539 299 aa10.69□□□□□ -0.7
CHD8-208ENST00000555301 CD81P60033 236 aa10.69□□□□□ -0.7
CHD8-208ENST00000555301 RAB2AP61019 212 aa10.69□□□□□ -0.7
CHD8-208ENST00000555301 TMEM41BQ5BJD5 291 aa10.69□□□□□ -0.7
CHD8-208ENST00000555301 AKR1C8PQ5T2L2 129 aa10.69□□□□□ -0.7
CHD8-208ENST00000555301 EIF5AL1Q6IS14 154 aaKnown RBP10.69□□□□□ -0.7
CHD8-208ENST00000555301 MIR17HGQ75NE6 70 aa10.69□□□□□ -0.7
CHD8-208ENST00000555301 DCANP1Q8TF63 244 aa10.69□□□□□ -0.7
CHD8-208ENST00000555301 AURKAIP1Q9NWT8 199 aaPredicted RBP10.69□□□□□ -0.7
CHD8-208ENST00000555301 TMEM14CQ9P0S9 112 aa10.69□□□□□ -0.7
CHD8-208ENST00000555301 SMAD5-AS1Q9Y6J3 95 aa10.69□□□□□ -0.7
CHD8-208ENST00000555301 A0A087X0K7 114 aa10.68□□□□□ -0.7
CHD8-208ENST00000555301 MRPS12O15235 138 aaKnown RBP10.68□□□□□ -0.7
CHD8-208ENST00000555301 NKX2-5P52952 324 aaPredicted RBP10.68□□□□□ -0.7
CHD8-208ENST00000555301 SPATA31B1PQ5VZV4 182 aa10.68□□□□□ -0.7
CHD8-208ENST00000555301 FAM122CQ6P4D5 195 aa10.68□□□□□ -0.7
CHD8-208ENST00000555301 FAM110AQ9BQ89 295 aa10.68□□□□□ -0.7
CHD8-208ENST00000555301 UMAD1C9J7I0 102 aa10.67□□□□□ -0.7
CHD8-208ENST00000555301 CD7P09564 240 aa10.67□□□□□ -0.7
CHD8-208ENST00000555301 ID1P41134 155 aa10.67□□□□□ -0.7
CHD8-208ENST00000555301 CDC34P49427 236 aaPredicted RBP10.67□□□□□ -0.7
CHD8-208ENST00000555301 SNRPD3P62318 126 aaKnown RBP10.67□□□□□ -0.7
CHD8-208ENST00000555301 GUK1Q16774 197 aa10.67□□□□□ -0.7
CHD8-208ENST00000555301 KHDC3LQ587J8 217 aa10.67□□□□□ -0.7
CHD8-208ENST00000555301 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.67□□□□□ -0.7
CHD8-208ENST00000555301 RPP25LQ8N5L8 163 aaKnown RBP10.67□□□□□ -0.7
CHD8-208ENST00000555301 SLC25A2Q9BXI2 301 aa10.67□□□□□ -0.7
CHD8-208ENST00000555301 ACTR3CQ9C0K3 210 aaPredicted RBP10.67□□□□□ -0.7
CHD8-208ENST00000555301 HRH4Q9H3N8 390 aa10.67□□□□□ -0.7
CHD8-208ENST00000555301 RPRMQ9NS64 109 aa10.67□□□□□ -0.7
CHD8-208ENST00000555301 OR11H12B2RN74 326 aa10.66□□□□□ -0.7
CHD8-208ENST00000555301 ISLRO14498 428 aa10.66□□□□□ -0.7
CHD8-208ENST00000555301 PRB2P02812 416 aaPredicted RBP10.66□□□□□ -0.7
CHD8-208ENST00000555301 IGLC2P0DOY2 106 aa10.66□□□□□ -0.7
CHD8-208ENST00000555301 HIST1H1EP10412 219 aaKnown RBP10.66□□□□□ -0.7
CHD8-208ENST00000555301 LCN15Q6UWW0 184 aa10.66□□□□□ -0.7
CHD8-208ENST00000555301 PQLC2Q6ZP29 291 aa10.66□□□□□ -0.7
CHD8-208ENST00000555301 Q8N1Y9 231 aa10.66□□□□□ -0.7
CHD8-208ENST00000555301 LRRC20Q8TCA0 184 aa10.66□□□□□ -0.7
CHD8-208ENST00000555301 FAM167A-AS1Q96KT0 104 aa10.66□□□□□ -0.7
CHD8-208ENST00000555301 C16orf92Q96LL3 132 aa10.66□□□□□ -0.7
CHD8-208ENST00000555301 PAXXQ9BUH6 204 aa10.66□□□□□ -0.7
CHD8-208ENST00000555301 OR51M1Q9H341 326 aa10.66□□□□□ -0.7
CHD8-208ENST00000555301 SOCS3O14543 225 aa10.65□□□□□ -0.7
CHD8-208ENST00000555301 OR7C2O60412 319 aa10.65□□□□□ -0.7
CHD8-208ENST00000555301 PSMB3P49720 205 aa10.65□□□□□ -0.7
CHD8-208ENST00000555301 DEFA6Q01524 100 aa10.65□□□□□ -0.7
CHD8-208ENST00000555301 ODF3L2Q3SX64 289 aa10.65□□□□□ -0.7
CHD8-208ENST00000555301 TMED6Q8WW62 240 aa10.65□□□□□ -0.7
CHD8-208ENST00000555301 RAB24Q969Q5 203 aa10.65□□□□□ -0.7
CHD8-208ENST00000555301 C17orf77Q96MU5 243 aa10.65□□□□□ -0.7
CHD8-208ENST00000555301 SLC50A1Q9BRV3 221 aa10.65□□□□□ -0.7
CHD8-208ENST00000555301 MAP6D1Q9H9H5 199 aa10.65□□□□□ -0.7
CHD8-208ENST00000555301 C19orf73Q9NVV2 129 aa10.65□□□□□ -0.7
CHD8-208ENST00000555301 ZNF253O75346 499 aa10.64□□□□□ -0.71
CHD8-208ENST00000555301 ZNF688P0C7X2 276 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms