RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 FAM219AQ8IW50 185 aa6.51□□□□□ -1.37
SCFD1-215ENST00000555259 ARRDC1Q8N5I2 433 aa6.51□□□□□ -1.37
SCFD1-215ENST00000555259 GPX8Q8TED1 209 aa6.51□□□□□ -1.37
SCFD1-215ENST00000555259 NTN5Q8WTR8 489 aaPredicted RBP6.51□□□□□ -1.37
SCFD1-215ENST00000555259 SLC25A22Q9H936 323 aa6.51□□□□□ -1.37
SCFD1-215ENST00000555259 MSRB1Q9NZV6 116 aa6.51□□□□□ -1.37
SCFD1-215ENST00000555259 CACNG5Q9UF02 275 aa6.51□□□□□ -1.37
SCFD1-215ENST00000555259 BLOC1S6Q9UL45 172 aa6.51□□□□□ -1.37
SCFD1-215ENST00000555259 TRAV9-2A0A087WT02 112 aa6.5□□□□□ -1.37
SCFD1-215ENST00000555259 NPIPB6E9PJ23 425 aa6.5□□□□□ -1.37
SCFD1-215ENST00000555259 FABP1P07148 127 aa6.5□□□□□ -1.37
SCFD1-215ENST00000555259 LORP23490 312 aaPredicted RBP6.5□□□□□ -1.37
SCFD1-215ENST00000555259 HIST1H1AQ02539 215 aaPredicted RBP6.5□□□□□ -1.37
SCFD1-215ENST00000555259 ZNF738Q8NE65 137 aa6.5□□□□□ -1.37
SCFD1-215ENST00000555259 OR8A1Q8NGG7 326 aa6.5□□□□□ -1.37
SCFD1-215ENST00000555259 PPP1R14DQ9NXH3 145 aa6.5□□□□□ -1.37
SCFD1-215ENST00000555259 TMEM127O75204 238 aa6.49□□□□□ -1.37
SCFD1-215ENST00000555259 C1QBP02746 253 aa6.49□□□□□ -1.37
SCFD1-215ENST00000555259 CDKN1BP46527 198 aa6.49□□□□□ -1.37
SCFD1-215ENST00000555259 Q6ZTI0 123 aa6.49□□□□□ -1.37
SCFD1-215ENST00000555259 LHFPL1Q86WI0 220 aa6.49□□□□□ -1.37
SCFD1-215ENST00000555259 CCDC28AQ8IWP9 274 aa6.49□□□□□ -1.37
SCFD1-215ENST00000555259 OR4D5Q8NGN0 318 aa6.49□□□□□ -1.37
SCFD1-215ENST00000555259 OR1B1Q8NGR6 318 aa6.49□□□□□ -1.37
SCFD1-215ENST00000555259 COPZ2Q9P299 210 aa6.49□□□□□ -1.37
SCFD1-215ENST00000555259 LY96Q9Y6Y9 160 aa6.49□□□□□ -1.37
SCFD1-215ENST00000555259 LOC100506127A0A0U1RQW1 187 aa6.48□□□□□ -1.37
SCFD1-215ENST00000555259 LRCOL1A6NCL2 159 aa6.48□□□□□ -1.37
SCFD1-215ENST00000555259 SNURFLB1AK76 121 aa6.48□□□□□ -1.37
SCFD1-215ENST00000555259 GABARAPH6UMI1 98 aa6.48□□□□□ -1.37
SCFD1-215ENST00000555259 GABARAPO95166 117 aa6.48□□□□□ -1.37
SCFD1-215ENST00000555259 CDS2O95674 445 aa6.48□□□□□ -1.37
SCFD1-215ENST00000555259 GPX4P36969 197 aaPredicted RBP6.48□□□□□ -1.37
SCFD1-215ENST00000555259 FGL1Q08830 312 aa6.48□□□□□ -1.37
SCFD1-215ENST00000555259 SAMD12Q8N8I0 201 aa6.48□□□□□ -1.37
SCFD1-215ENST00000555259 LHFPL5Q8TAF8 219 aa6.48□□□□□ -1.37
SCFD1-215ENST00000555259 SLC35E1Q96K37 410 aa6.48□□□□□ -1.37
SCFD1-215ENST00000555259 C20orf144Q9BQM9 153 aa6.48□□□□□ -1.37
SCFD1-215ENST00000555259 LINC00467Q9BRT7 94 aa6.48□□□□□ -1.37
SCFD1-215ENST00000555259 SLC45A2Q9UMX9 530 aa6.48□□□□□ -1.37
SCFD1-215ENST00000555259 U3KQ87 197 aa6.48□□□□□ -1.37
SCFD1-215ENST00000555259 IGKV1OR2-108A0A075B7D4 117 aa6.48□□□□□ -1.37
SCFD1-215ENST00000555259 K7EP13 123 aa6.48□□□□□ -1.37
SCFD1-215ENST00000555259 B3GALNT1O75752 331 aa6.48□□□□□ -1.37
SCFD1-215ENST00000555259 OR5AC1P0C628 307 aa6.48□□□□□ -1.37
SCFD1-215ENST00000555259 DAZ2Q13117 558 aaKnown RBP6.48□□□□□ -1.37
SCFD1-215ENST00000555259 MEF2DQ14814 521 aa6.48□□□□□ -1.37
SCFD1-215ENST00000555259 KIR3DS1Q14943 382 aa6.48□□□□□ -1.37
SCFD1-215ENST00000555259 LYPD5Q6UWN5 251 aa6.48□□□□□ -1.37
SCFD1-215ENST00000555259 Q6ZSA8 131 aa6.48□□□□□ -1.37
SCFD1-215ENST00000555259 LGI3Q8N145 548 aa6.48□□□□□ -1.37
SCFD1-215ENST00000555259 CCDC71LQ8N9Z2 235 aa6.48□□□□□ -1.37
SCFD1-215ENST00000555259 RBPMSQ93062 196 aaKnown RBP6.48□□□□□ -1.37
SCFD1-215ENST00000555259 GPR82Q96P67 336 aa6.48□□□□□ -1.37
SCFD1-215ENST00000555259 TRGV9Q99603 122 aa6.48□□□□□ -1.37
SCFD1-215ENST00000555259 TMEM222Q9H0R3 208 aa6.48□□□□□ -1.37
SCFD1-215ENST00000555259 ICOSQ9Y6W8 199 aa6.48□□□□□ -1.37
SCFD1-215ENST00000555259 PKHD1L1Q86WI1 4243 aa6.47□□□□□ -1.37
SCFD1-215ENST00000555259 TRGV2A0A075B6R0 118 aa6.47□□□□□ -1.37
SCFD1-215ENST00000555259 PRB4P10163 310 aaPredicted RBP6.47□□□□□ -1.37
SCFD1-215ENST00000555259 CXCL3P19876 107 aa6.47□□□□□ -1.37
SCFD1-215ENST00000555259 KRTAP10-4P60372 401 aaPredicted RBP6.47□□□□□ -1.37
SCFD1-215ENST00000555259 SELENOHQ8IZQ5 122 aaKnown RBP6.47□□□□□ -1.37
SCFD1-215ENST00000555259 Q8N814 137 aa6.47□□□□□ -1.37
SCFD1-215ENST00000555259 GLYATL2Q8WU03 294 aa6.47□□□□□ -1.37
SCFD1-215ENST00000555259 NRG4Q8WWG1 115 aa6.47□□□□□ -1.37
SCFD1-215ENST00000555259 CNBD2Q96M20 576 aa6.47□□□□□ -1.37
SCFD1-215ENST00000555259 PAX4O43316 350 aa6.46□□□□□ -1.38
SCFD1-215ENST00000555259 CFDP00746 253 aaPredicted RBP6.46□□□□□ -1.38
SCFD1-215ENST00000555259 EVI2AP22794 236 aa6.46□□□□□ -1.38
SCFD1-215ENST00000555259 GABARAPL2P60520 117 aa6.46□□□□□ -1.38
SCFD1-215ENST00000555259 PSG3Q16557 428 aa6.46□□□□□ -1.38
SCFD1-215ENST00000555259 XP32Q5T750 250 aa6.46□□□□□ -1.38
SCFD1-215ENST00000555259 GFI1BQ5VTD9 330 aa6.46□□□□□ -1.38
SCFD1-215ENST00000555259 WFDC10BQ8IUB3 73 aa6.46□□□□□ -1.38
SCFD1-215ENST00000555259 SNX29P2Q8IUI4 249 aa6.46□□□□□ -1.38
SCFD1-215ENST00000555259 OR13C8Q8NGS7 320 aa6.46□□□□□ -1.38
SCFD1-215ENST00000555259 ZFAND1Q8TCF1 268 aa6.46□□□□□ -1.38
SCFD1-215ENST00000555259 DTD1Q8TEA8 209 aa6.46□□□□□ -1.38
SCFD1-215ENST00000555259 CACFD1Q9UGQ2 172 aa6.46□□□□□ -1.38
SCFD1-215ENST00000555259 PSCAO43653 123 aa6.45□□□□□ -1.38
SCFD1-215ENST00000555259 ZNF324O75467 553 aaPredicted RBP6.45□□□□□ -1.38
SCFD1-215ENST00000555259 ORM2P19652 201 aa6.45□□□□□ -1.38
SCFD1-215ENST00000555259 RNASE10Q5GAN6 216 aaKnown RBP6.45□□□□□ -1.38
SCFD1-215ENST00000555259 TMEM268Q5VZI3 342 aa6.45□□□□□ -1.38
SCFD1-215ENST00000555259 GGNBP1Q5YKI7 109 aa6.45□□□□□ -1.38
SCFD1-215ENST00000555259 CROCCP3Q8IVE0 287 aa6.45□□□□□ -1.38
SCFD1-215ENST00000555259 THAP8Q8NA92 274 aa6.45□□□□□ -1.38
SCFD1-215ENST00000555259 PARD6GQ9BYG4 376 aaPredicted RBP6.45□□□□□ -1.38
SCFD1-215ENST00000555259 TEX13DA0A0J9YY54 714 aaPredicted RBP6.44□□□□□ -1.38
SCFD1-215ENST00000555259 SULT1A3P0DMM9 295 aa6.44□□□□□ -1.38
SCFD1-215ENST00000555259 SULT1A4P0DMN0 295 aa6.44□□□□□ -1.38
SCFD1-215ENST00000555259 GATA2P23769 480 aaPredicted RBP6.44□□□□□ -1.38
SCFD1-215ENST00000555259 ATP5IP56385 69 aaPredicted RBP6.44□□□□□ -1.38
SCFD1-215ENST00000555259 TERB2Q8NHR7 220 aa6.44□□□□□ -1.38
SCFD1-215ENST00000555259 IL22RA2Q969J5 263 aa6.44□□□□□ -1.38
SCFD1-215ENST00000555259 RPUSD4Q96CM3 377 aaKnown RBP6.44□□□□□ -1.38
SCFD1-215ENST00000555259 TMEM147Q9BVK8 224 aa6.44□□□□□ -1.38
SCFD1-215ENST00000555259 HSPB7Q9UBY9 170 aa6.44□□□□□ -1.38
SCFD1-215ENST00000555259 TMEM56-RWDD3S4R434 201 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms