RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 DOCK10Q96BY6 2186 aa2.3□□□□□ -2.04
CKS1BP1-201ENST00000555221 DNAJC13O75165 2243 aa2.3□□□□□ -2.04
CKS1BP1-201ENST00000555221 CENPEQ02224 2701 aa2.3□□□□□ -2.04
CKS1BP1-201ENST00000555221 PDZD2O15018 2839 aa2.3□□□□□ -2.04
CKS1BP1-201ENST00000555221 CRYBG3Q68DQ2 2970 aa2.29□□□□□ -2.04
CKS1BP1-201ENST00000555221 ANKHD1Q8IWZ3 2542 aaKnown RBP2.29□□□□□ -2.04
CKS1BP1-201ENST00000555221 F8P00451 2351 aa2.29□□□□□ -2.04
CKS1BP1-201ENST00000555221 NINQ8N4C6 2090 aa2.29□□□□□ -2.04
CKS1BP1-201ENST00000555221 TRAV36DV7A0A075B6V5 113 aa2.29□□□□□ -2.04
CKS1BP1-201ENST00000555221 TMED7-TICAM2A0A0A6YYA0 188 aa2.29□□□□□ -2.04
CKS1BP1-201ENST00000555221 TRAPPC13A5PLN9 417 aa2.29□□□□□ -2.04
CKS1BP1-201ENST00000555221 LY6LH3BQJ8 138 aa2.29□□□□□ -2.04
CKS1BP1-201ENST00000555221 OR5F1O95221 314 aa2.29□□□□□ -2.04
CKS1BP1-201ENST00000555221 CLPSP04118 112 aa2.29□□□□□ -2.04
CKS1BP1-201ENST00000555221 PRB1P04280 392 aa2.29□□□□□ -2.04
CKS1BP1-201ENST00000555221 RPSAP08865 295 aaKnown RBP2.29□□□□□ -2.04
CKS1BP1-201ENST00000555221 CRHBPP24387 322 aa2.29□□□□□ -2.04
CKS1BP1-201ENST00000555221 BLVRAP53004 296 aa2.29□□□□□ -2.04
CKS1BP1-201ENST00000555221 TAS2R41P59536 307 aa2.29□□□□□ -2.04
CKS1BP1-201ENST00000555221 FABP5Q01469 135 aa2.29□□□□□ -2.04
CKS1BP1-201ENST00000555221 NNATQ16517 81 aa2.29□□□□□ -2.04
CKS1BP1-201ENST00000555221 PLPPR5Q32ZL2 321 aa2.29□□□□□ -2.04
CKS1BP1-201ENST00000555221 RPL13AP3Q6NVV1 102 aa2.29□□□□□ -2.04
CKS1BP1-201ENST00000555221 AMTNQ6UX39 209 aa2.29□□□□□ -2.04
CKS1BP1-201ENST00000555221 CLECL1Q8IZS7 167 aa2.29□□□□□ -2.04
CKS1BP1-201ENST00000555221 Q8N402 240 aa2.29□□□□□ -2.04
CKS1BP1-201ENST00000555221 CNEP1R1Q8N9A8 125 aa2.29□□□□□ -2.04
CKS1BP1-201ENST00000555221 OR5D16Q8NGK9 328 aa2.29□□□□□ -2.04
CKS1BP1-201ENST00000555221 C10orf82Q8WW14 230 aa2.29□□□□□ -2.04
CKS1BP1-201ENST00000555221 RAB8BQ92930 207 aa2.29□□□□□ -2.04
CKS1BP1-201ENST00000555221 ITFG2Q969R8 447 aa2.29□□□□□ -2.04
CKS1BP1-201ENST00000555221 CPNE2Q96FN4 548 aaPredicted RBP2.29□□□□□ -2.04
CKS1BP1-201ENST00000555221 DNAJC30Q96LL9 226 aa2.29□□□□□ -2.04
CKS1BP1-201ENST00000555221 TEX37Q96LM6 180 aa2.29□□□□□ -2.04
CKS1BP1-201ENST00000555221 KCTD7Q96MP8 289 aa2.29□□□□□ -2.04
CKS1BP1-201ENST00000555221 FAM107BQ9H098 131 aa2.29□□□□□ -2.04
CKS1BP1-201ENST00000555221 PROK2Q9HC23 129 aa2.29□□□□□ -2.04
CKS1BP1-201ENST00000555221 TMEM106BQ9NUM4 274 aa2.29□□□□□ -2.04
CKS1BP1-201ENST00000555221 NOSIPQ9Y314 301 aaKnown RBP2.29□□□□□ -2.04
CKS1BP1-201ENST00000555221 MED31Q9Y3C7 131 aa2.29□□□□□ -2.04
CKS1BP1-201ENST00000555221 CCDC88CQ9P219 2028 aa2.29□□□□□ -2.04
CKS1BP1-201ENST00000555221 HIVEP3Q5T1R4 2406 aa2.28□□□□□ -2.04
CKS1BP1-201ENST00000555221 DSPPQ9NZW4 1301 aa2.28□□□□□ -2.04
CKS1BP1-201ENST00000555221 A0A087WUJ7 227 aa2.28□□□□□ -2.04
CKS1BP1-201ENST00000555221 C5orf49A4QMS7 147 aa2.28□□□□□ -2.04
CKS1BP1-201ENST00000555221 EEF1E1-BLOC1S5C9J1V9 151 aa2.28□□□□□ -2.04
CKS1BP1-201ENST00000555221 F5H768 121 aa2.28□□□□□ -2.04
CKS1BP1-201ENST00000555221 H3BPC8 53 aa2.28□□□□□ -2.04
CKS1BP1-201ENST00000555221 CXCR6O00574 342 aa2.28□□□□□ -2.04
CKS1BP1-201ENST00000555221 GNGT2O14610 69 aa2.28□□□□□ -2.04
CKS1BP1-201ENST00000555221 CHP2O43745 196 aa2.28□□□□□ -2.04
CKS1BP1-201ENST00000555221 SSNA1O43805 119 aa2.28□□□□□ -2.04
CKS1BP1-201ENST00000555221 GZMBP10144 247 aa2.28□□□□□ -2.04
CKS1BP1-201ENST00000555221 CXCL2P19875 107 aa2.28□□□□□ -2.04
CKS1BP1-201ENST00000555221 CXCL3P19876 107 aa2.28□□□□□ -2.04
CKS1BP1-201ENST00000555221 RPS4Y1P22090 263 aaKnown RBP2.28□□□□□ -2.04
CKS1BP1-201ENST00000555221 PSME3P61289 254 aa2.28□□□□□ -2.04
CKS1BP1-201ENST00000555221 PCBD1P61457 104 aa2.28□□□□□ -2.04
CKS1BP1-201ENST00000555221 H3F3AP84243 136 aa2.28□□□□□ -2.04
CKS1BP1-201ENST00000555221 C1orf140Q5VVS0 124 aa2.28□□□□□ -2.04
CKS1BP1-201ENST00000555221 DHFR2Q86XF0 187 aa2.28□□□□□ -2.04
CKS1BP1-201ENST00000555221 OR5J2Q8NH18 312 aa2.28□□□□□ -2.04
CKS1BP1-201ENST00000555221 DNAJC9Q8WXX5 260 aa2.28□□□□□ -2.04
CKS1BP1-201ENST00000555221 TRIM4Q9C037 500 aa2.28□□□□□ -2.04
CKS1BP1-201ENST00000555221 BAIAP2Q9UQB8 552 aa2.28□□□□□ -2.04
CKS1BP1-201ENST00000555221 OTOGQ6ZRI0 2925 aa2.28□□□□□ -2.04
CKS1BP1-201ENST00000555221 DSCAML1Q8TD84 2053 aa2.28□□□□□ -2.04
CKS1BP1-201ENST00000555221 NIPBLQ6KC79 2804 aaeCLIP2.28□□□□□ -2.04
CKS1BP1-201ENST00000555221 KMT2CQ8NEZ4 4911 aaKnown RBP2.28□□□□□ -2.04
CKS1BP1-201ENST00000555221 A0A0J9YW62 118 aa2.27□□□□□ -2.05
CKS1BP1-201ENST00000555221 A0A1B0GWA3 101 aa2.27□□□□□ -2.05
CKS1BP1-201ENST00000555221 TMEM235A6NFC5 223 aa2.27□□□□□ -2.05
CKS1BP1-201ENST00000555221 E2F6O75461 281 aa2.27□□□□□ -2.05
CKS1BP1-201ENST00000555221 ZNF682O95780 498 aa2.27□□□□□ -2.05
CKS1BP1-201ENST00000555221 MT-CO2P00403 227 aa2.27□□□□□ -2.05
CKS1BP1-201ENST00000555221 IFNGP01579 166 aa2.27□□□□□ -2.05
CKS1BP1-201ENST00000555221 APOC1P02654 83 aa2.27□□□□□ -2.05
CKS1BP1-201ENST00000555221 HMGN1P05114 100 aa2.27□□□□□ -2.05
CKS1BP1-201ENST00000555221 CD36P16671 472 aa2.27□□□□□ -2.05
CKS1BP1-201ENST00000555221 CDKN2CP42773 168 aa2.27□□□□□ -2.05
CKS1BP1-201ENST00000555221 SNCBQ16143 134 aa2.27□□□□□ -2.05
CKS1BP1-201ENST00000555221 SLC36A2Q495M3 483 aa2.27□□□□□ -2.05
CKS1BP1-201ENST00000555221 AAED1Q7RTV5 226 aa2.27□□□□□ -2.05
CKS1BP1-201ENST00000555221 DEFB107AQ8IZN7 70 aa2.27□□□□□ -2.05
CKS1BP1-201ENST00000555221 OR52L1Q8NGH7 329 aa2.27□□□□□ -2.05
CKS1BP1-201ENST00000555221 LINC00470Q9BZP3 86 aa2.27□□□□□ -2.05
CKS1BP1-201ENST00000555221 NMNAT1Q9HAN9 279 aaPredicted RBP2.27□□□□□ -2.05
CKS1BP1-201ENST00000555221 HES4Q9HCC6 221 aa2.27□□□□□ -2.05
CKS1BP1-201ENST00000555221 C8orf4Q9NR00 106 aa2.27□□□□□ -2.05
CKS1BP1-201ENST00000555221 NOP16Q9Y3C1 178 aaKnown RBP2.27□□□□□ -2.05
CKS1BP1-201ENST00000555221 PKDREJQ9NTG1 2253 aa2.27□□□□□ -2.05
CKS1BP1-201ENST00000555221 CACNA1CQ13936 2221 aa2.27□□□□□ -2.05
CKS1BP1-201ENST00000555221 TLN2Q9Y4G6 2542 aa2.27□□□□□ -2.05
CKS1BP1-201ENST00000555221 ICE1Q9Y2F5 2266 aa2.26□□□□□ -2.05
CKS1BP1-201ENST00000555221 UTP20O75691 2785 aaKnown RBP2.26□□□□□ -2.05
CKS1BP1-201ENST00000555221 A0A0G2JMM0 328 aa2.26□□□□□ -2.05
CKS1BP1-201ENST00000555221 A0A1W2PPB8 328 aa2.26□□□□□ -2.05
CKS1BP1-201ENST00000555221 A0A1W2PQL4 384 aaPredicted RBP2.26□□□□□ -2.05
CKS1BP1-201ENST00000555221 A0A1W2PRS3 328 aa2.26□□□□□ -2.05
CKS1BP1-201ENST00000555221 KIR3DP1A8MWS1 328 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms