RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 Q6ZUT4 128 aa12.55□□□□□ -0.4
SYNE3-203ENST00000554873 EPDR1Q9UM22 224 aa12.55□□□□□ -0.4
SYNE3-203ENST00000554873 FOXA2Q9Y261 457 aaPredicted RBP12.55□□□□□ -0.4
SYNE3-203ENST00000554873 TECTAO75443 2155 aa12.55□□□□□ -0.4
SYNE3-203ENST00000554873 A0A1B0GWB2 263 aa12.55□□□□□ -0.4
SYNE3-203ENST00000554873 TNFRSF13BO14836 293 aaPredicted RBP12.55□□□□□ -0.4
SYNE3-203ENST00000554873 PSMG4Q5JS54 123 aa12.55□□□□□ -0.4
SYNE3-203ENST00000554873 PIFOQ8TCI5 191 aa12.55□□□□□ -0.4
SYNE3-203ENST00000554873 MOSP00540 346 aa12.54□□□□□ -0.4
SYNE3-203ENST00000554873 CEND1Q8N111 149 aa12.54□□□□□ -0.4
SYNE3-203ENST00000554873 OR5AN1Q8NGI8 311 aa12.54□□□□□ -0.4
SYNE3-203ENST00000554873 DDB2Q92466 427 aa12.54□□□□□ -0.4
SYNE3-203ENST00000554873 LEAP2Q969E1 77 aa12.54□□□□□ -0.4
SYNE3-203ENST00000554873 SGK494Q96LW2 274 aa12.54□□□□□ -0.4
SYNE3-203ENST00000554873 TMEM14BQ9NUH8 114 aa12.54□□□□□ -0.4
SYNE3-203ENST00000554873 IGHV3OR15-7A0A075B7D8 119 aa12.54□□□□□ -0.4
SYNE3-203ENST00000554873 MYCNOSP40205 109 aa12.54□□□□□ -0.4
SYNE3-203ENST00000554873 SRSF6Q13247 344 aaKnown RBP12.54□□□□□ -0.4
SYNE3-203ENST00000554873 ZNRF1Q8ND25 227 aa12.54□□□□□ -0.4
SYNE3-203ENST00000554873 ATP6V0E2Q8NHE4 81 aa12.54□□□□□ -0.4
SYNE3-203ENST00000554873 ITLN1Q8WWA0 313 aa12.54□□□□□ -0.4
SYNE3-203ENST00000554873 AMTNQ6UX39 209 aa12.53□□□□□ -0.4
SYNE3-203ENST00000554873 TMEM178AQ8NBL3 297 aa12.53□□□□□ -0.4
SYNE3-203ENST00000554873 OR9G1Q8NH87 305 aa12.53□□□□□ -0.4
SYNE3-203ENST00000554873 C1QTNF4Q9BXJ3 329 aa12.53□□□□□ -0.4
SYNE3-203ENST00000554873 RALYQ9UKM9 306 aaKnown RBP12.53□□□□□ -0.4
SYNE3-203ENST00000554873 LTAP01374 205 aa12.53□□□□□ -0.4
SYNE3-203ENST00000554873 SLC25A5P05141 298 aaKnown RBP12.53□□□□□ -0.4
SYNE3-203ENST00000554873 FAM106CPP0CH98 169 aa12.53□□□□□ -0.4
SYNE3-203ENST00000554873 FAM106AQ4KMX7 169 aa12.53□□□□□ -0.4
SYNE3-203ENST00000554873 TNCP24821 2201 aa12.53□□□□□ -0.4
SYNE3-203ENST00000554873 CADP27708 2225 aa12.53□□□□□ -0.4
SYNE3-203ENST00000554873 SRRM5B3KS81 715 aa12.52□□□□□ -0.4
SYNE3-203ENST00000554873 MYOD1P15172 320 aa12.52□□□□□ -0.4
SYNE3-203ENST00000554873 IFI27P40305 119 aaPredicted RBP12.52□□□□□ -0.4
SYNE3-203ENST00000554873 KIR2DS2P43631 304 aa12.52□□□□□ -0.4
SYNE3-203ENST00000554873 XGP55808 180 aa12.52□□□□□ -0.4
SYNE3-203ENST00000554873 LOXL1Q08397 574 aaPredicted RBP12.52□□□□□ -0.4
SYNE3-203ENST00000554873 MBNL2Q5VZF2 373 aaKnown RBP12.52□□□□□ -0.4
SYNE3-203ENST00000554873 HINT2Q9BX68 163 aa12.52□□□□□ -0.4
SYNE3-203ENST00000554873 B5MCH6 92 aa12.52□□□□□ -0.41
SYNE3-203ENST00000554873 SPRNQ5BIV9 151 aa12.52□□□□□ -0.41
SYNE3-203ENST00000554873 FXYD5Q96DB9 178 aa12.52□□□□□ -0.41
SYNE3-203ENST00000554873 ZNF714Q96N38 554 aa12.52□□□□□ -0.41
SYNE3-203ENST00000554873 C9orf106Q8NAJ2 232 aa12.52□□□□□ -0.41
SYNE3-203ENST00000554873 GATD1Q8NB37 220 aa12.52□□□□□ -0.41
SYNE3-203ENST00000554873 LOC400499M0QZD8 3231 aa12.51□□□□□ -0.41
SYNE3-203ENST00000554873 INTS1Q8N201 2190 aaKnown RBP12.51□□□□□ -0.41
SYNE3-203ENST00000554873 CD59P13987 128 aa12.51□□□□□ -0.41
SYNE3-203ENST00000554873 SRSF1Q07955 248 aaKnown RBP eCLIP12.51□□□□□ -0.41
SYNE3-203ENST00000554873 MSMPQ1L6U9 139 aa12.51□□□□□ -0.41
SYNE3-203ENST00000554873 OSR1Q8TAX0 266 aaPredicted RBP12.51□□□□□ -0.41
SYNE3-203ENST00000554873 IFI27L1Q96BM0 104 aa12.51□□□□□ -0.41
SYNE3-203ENST00000554873 FMC1Q96HJ9 113 aa12.51□□□□□ -0.41
SYNE3-203ENST00000554873 CALYQ9NYX4 217 aa12.51□□□□□ -0.41
SYNE3-203ENST00000554873 IGHV1-18A0A0C4DH31 117 aa12.51□□□□□ -0.41
SYNE3-203ENST00000554873 A0A1B0GUT8 65 aa12.51□□□□□ -0.41
SYNE3-203ENST00000554873 COX7A2P2O60397 106 aa12.51□□□□□ -0.41
SYNE3-203ENST00000554873 IGLV1-44P01699 117 aa12.51□□□□□ -0.41
SYNE3-203ENST00000554873 RIGQ13278 110 aa12.51□□□□□ -0.41
SYNE3-203ENST00000554873 Q6ZS92 163 aa12.51□□□□□ -0.41
SYNE3-203ENST00000554873 SLC25A48Q6ZT89 311 aaKnown RBP12.51□□□□□ -0.41
SYNE3-203ENST00000554873 PPP1R35Q8TAP8 253 aa12.51□□□□□ -0.41
SYNE3-203ENST00000554873 HBDP02042 147 aa12.5□□□□□ -0.41
SYNE3-203ENST00000554873 CGB3P0DN86 165 aa12.5□□□□□ -0.41
SYNE3-203ENST00000554873 CGB7P0DN87 165 aa12.5□□□□□ -0.41
SYNE3-203ENST00000554873 PDPNQ86YL7 162 aa12.5□□□□□ -0.41
SYNE3-203ENST00000554873 UFC1Q9Y3C8 167 aa12.5□□□□□ -0.41
SYNE3-203ENST00000554873 IGHG3P01860 377 aa12.5□□□□□ -0.41
SYNE3-203ENST00000554873 C10orf113Q5VZT2 155 aa12.5□□□□□ -0.41
SYNE3-203ENST00000554873 C1orf162Q8NEQ5 155 aaPredicted RBP12.5□□□□□ -0.41
SYNE3-203ENST00000554873 OR1L4Q8NGR5 311 aa12.5□□□□□ -0.41
SYNE3-203ENST00000554873 ICE1Q9Y2F5 2266 aa12.5□□□□□ -0.41
SYNE3-203ENST00000554873 TRBV25-1A0A075B6N4 114 aa12.49□□□□□ -0.41
SYNE3-203ENST00000554873 C16orf97H3BN30 126 aa12.49□□□□□ -0.41
SYNE3-203ENST00000554873 COL8A1P27658 744 aa12.49□□□□□ -0.41
SYNE3-203ENST00000554873 C17orf58Q2M2W7 97 aa12.49□□□□□ -0.41
SYNE3-203ENST00000554873 C12orf74Q32Q52 190 aa12.49□□□□□ -0.41
SYNE3-203ENST00000554873 C8orf46Q8TAG6 207 aa12.49□□□□□ -0.41
SYNE3-203ENST00000554873 CACNG8Q8WXS5 425 aa12.49□□□□□ -0.41
SYNE3-203ENST00000554873 PGPA6NDG6 321 aa12.49□□□□□ -0.41
SYNE3-203ENST00000554873 VSTM5A8MXK1 200 aa12.49□□□□□ -0.41
SYNE3-203ENST00000554873 SAA2P0DJI9 122 aaPredicted RBP12.49□□□□□ -0.41
SYNE3-203ENST00000554873 ATP5IP56385 69 aaPredicted RBP12.49□□□□□ -0.41
SYNE3-203ENST00000554873 MZT1Q08AG7 82 aa12.49□□□□□ -0.41
SYNE3-203ENST00000554873 DSCAMO60469 2012 aa12.49□□□□□ -0.41
SYNE3-203ENST00000554873 IGKV2D-26A0A0A0MRZ7 120 aa12.48□□□□□ -0.41
SYNE3-203ENST00000554873 OVOL3O00110 214 aa12.48□□□□□ -0.41
SYNE3-203ENST00000554873 RRN3P1Q2M238 152 aa12.48□□□□□ -0.41
SYNE3-203ENST00000554873 PRELID3AQ96N28 172 aa12.48□□□□□ -0.41
SYNE3-203ENST00000554873 DKK2Q9UBU2 259 aa12.48□□□□□ -0.41
SYNE3-203ENST00000554873 PRNDQ9UKY0 176 aa12.48□□□□□ -0.41
SYNE3-203ENST00000554873 PCNX2A6NKB5 2137 aa12.48□□□□□ -0.41
SYNE3-203ENST00000554873 A0A1B0GW15 77 aa12.48□□□□□ -0.41
SYNE3-203ENST00000554873 NPIPB5A8MRT5 1133 aa12.48□□□□□ -0.41
SYNE3-203ENST00000554873 FHL3Q13643 280 aa12.48□□□□□ -0.41
SYNE3-203ENST00000554873 MLANAQ16655 118 aa12.48□□□□□ -0.41
SYNE3-203ENST00000554873 C2orf83Q53S99 150 aa12.48□□□□□ -0.41
SYNE3-203ENST00000554873 SVILO95425 2214 aa12.48□□□□□ -0.41
SYNE3-203ENST00000554873 CACNA1GO43497 2377 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms