RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 TLN1Q9Y490 2541 aaKnown RBP0.16□□□□□ -2.38
SCFD1-214ENST00000554819 OTOGQ6ZRI0 2925 aa0.16□□□□□ -2.38
SCFD1-214ENST00000554819 A0A0D9SG42 100 aa0.16□□□□□ -2.38
SCFD1-214ENST00000554819 CYB5BO43169 146 aa0.16□□□□□ -2.38
SCFD1-214ENST00000554819 PDE6DO43924 150 aa0.16□□□□□ -2.38
SCFD1-214ENST00000554819 RPP14O95059 124 aaKnown RBP0.16□□□□□ -2.38
SCFD1-214ENST00000554819 LYPLA2O95372 231 aa0.16□□□□□ -2.38
SCFD1-214ENST00000554819 RPS17P08708 135 aaKnown RBP0.16□□□□□ -2.38
SCFD1-214ENST00000554819 SRIP30626 198 aa0.16□□□□□ -2.38
SCFD1-214ENST00000554819 CEBPGP53567 150 aa0.16□□□□□ -2.38
SCFD1-214ENST00000554819 DYNLT1P63172 113 aa0.16□□□□□ -2.38
SCFD1-214ENST00000554819 AESQ08117 197 aa0.16□□□□□ -2.38
SCFD1-214ENST00000554819 OR52L1Q8NGH7 329 aa0.16□□□□□ -2.38
SCFD1-214ENST00000554819 OR51A2Q8NGJ7 313 aa0.16□□□□□ -2.38
SCFD1-214ENST00000554819 OR2T35Q8NGX2 323 aa0.16□□□□□ -2.38
SCFD1-214ENST00000554819 SLC25A40Q8TBP6 338 aa0.16□□□□□ -2.38
SCFD1-214ENST00000554819 LINC00052Q96N35 136 aa0.16□□□□□ -2.38
SCFD1-214ENST00000554819 PRADC1Q9BSG0 188 aa0.16□□□□□ -2.38
SCFD1-214ENST00000554819 TMEM126AQ9H061 195 aa0.16□□□□□ -2.38
SCFD1-214ENST00000554819 PARVBQ9HBI1 364 aa0.16□□□□□ -2.38
SCFD1-214ENST00000554819 UQCC1Q9NVA1 299 aa0.16□□□□□ -2.38
SCFD1-214ENST00000554819 FBXO5Q9UKT4 447 aa0.16□□□□□ -2.38
SCFD1-214ENST00000554819 FLNCQ14315 2725 aa0.16□□□□□ -2.38
SCFD1-214ENST00000554819 SRCAPQ6ZRS2 3230 aa0.16□□□□□ -2.38
SCFD1-214ENST00000554819 NBEAL1Q6ZS30 2694 aa0.16□□□□□ -2.38
SCFD1-214ENST00000554819 COL7A1Q02388 2944 aa0.16□□□□□ -2.38
SCFD1-214ENST00000554819 ARHGEF28Q8N1W1 1705 aaKnown RBP0.16□□□□□ -2.38
SCFD1-214ENST00000554819 MAP1BP46821 2468 aaKnown RBP0.15□□□□□ -2.38
SCFD1-214ENST00000554819 CCDC144AA2RUR9 1427 aa0.15□□□□□ -2.39
SCFD1-214ENST00000554819 ZFYVE9O95405 1425 aa0.15□□□□□ -2.39
SCFD1-214ENST00000554819 FMN1Q68DA7 1419 aa0.15□□□□□ -2.39
SCFD1-214ENST00000554819 UTP20O75691 2785 aaKnown RBP0.15□□□□□ -2.39
SCFD1-214ENST00000554819 ITPR1Q14643 2758 aa0.15□□□□□ -2.39
SCFD1-214ENST00000554819 CITO14578 2027 aa0.15□□□□□ -2.39
SCFD1-214ENST00000554819 C2CD3Q4AC94 2353 aa0.15□□□□□ -2.39
SCFD1-214ENST00000554819 TRAV4A0A0B4J268 109 aa0.15□□□□□ -2.39
SCFD1-214ENST00000554819 KALRNO60229 2985 aa0.15□□□□□ -2.39
SCFD1-214ENST00000554819 SMIM17P0DL12 118 aa0.15□□□□□ -2.39
SCFD1-214ENST00000554819 ROMO1P60602 79 aa0.15□□□□□ -2.39
SCFD1-214ENST00000554819 EIF5AP63241 154 aaKnown RBP0.15□□□□□ -2.39
SCFD1-214ENST00000554819 CCL7P80098 99 aa0.15□□□□□ -2.39
SCFD1-214ENST00000554819 ZNF833PQ6ZTB9 187 aa0.15□□□□□ -2.39
SCFD1-214ENST00000554819 GRINAQ7Z429 371 aa0.15□□□□□ -2.39
SCFD1-214ENST00000554819 EXOC3-AS1Q8N2X6 119 aa0.15□□□□□ -2.39
SCFD1-214ENST00000554819 PRAP1Q96NZ9 151 aa0.15□□□□□ -2.39
SCFD1-214ENST00000554819 GLTPQ9NZD2 209 aa0.15□□□□□ -2.39
SCFD1-214ENST00000554819 PRELID3BQ9Y3B1 194 aa0.15□□□□□ -2.39
SCFD1-214ENST00000554819 ITPR2Q14571 2701 aa0.15□□□□□ -2.39
SCFD1-214ENST00000554819 PCNTO95613 3336 aa0.15□□□□□ -2.39
SCFD1-214ENST00000554819 PHRF1Q9P1Y6 1649 aaKnown RBP0.15□□□□□ -2.39
SCFD1-214ENST00000554819 FAM208BQ5VWN6 2430 aa0.15□□□□□ -2.39
SCFD1-214ENST00000554819 GVINP1Q7Z2Y8 2422 aa0.15□□□□□ -2.39
SCFD1-214ENST00000554819 TEX15Q9BXT5 2789 aa0.14□□□□□ -2.39
SCFD1-214ENST00000554819 TLN2Q9Y4G6 2542 aa0.14□□□□□ -2.39
SCFD1-214ENST00000554819 COL24A1Q17RW2 1714 aa0.14□□□□□ -2.39
SCFD1-214ENST00000554819 TRBV19A0A075B6N1 114 aa0.14□□□□□ -2.39
SCFD1-214ENST00000554819 TRGV10A0A0A0MS01 117 aa0.14□□□□□ -2.39
SCFD1-214ENST00000554819 TIMM17BO60830 172 aa0.14□□□□□ -2.39
SCFD1-214ENST00000554819 KRTAP2-3P0C7H8 128 aa0.14□□□□□ -2.39
SCFD1-214ENST00000554819 HOXA6P31267 233 aa0.14□□□□□ -2.39
SCFD1-214ENST00000554819 SRP14P37108 136 aaKnown RBP0.14□□□□□ -2.39
SCFD1-214ENST00000554819 PIGPP57054 158 aa0.14□□□□□ -2.39
SCFD1-214ENST00000554819 RRN3P1Q2M238 152 aa0.14□□□□□ -2.39
SCFD1-214ENST00000554819 LYRM7Q5U5X0 104 aa0.14□□□□□ -2.39
SCFD1-214ENST00000554819 C22orf39Q6P5X5 142 aa0.14□□□□□ -2.39
SCFD1-214ENST00000554819 STAG3L4Q8TBR4 150 aa0.14□□□□□ -2.39
SCFD1-214ENST00000554819 YPEL2Q96QA6 119 aa0.14□□□□□ -2.39
SCFD1-214ENST00000554819 LYSMD1Q96S90 227 aa0.14□□□□□ -2.39
SCFD1-214ENST00000554819 KRTAP2-4Q9BYR9 128 aa0.14□□□□□ -2.39
SCFD1-214ENST00000554819 KRTAP2-1Q9BYU5 128 aa0.14□□□□□ -2.39
SCFD1-214ENST00000554819 SLC22A13Q9Y226 551 aa0.14□□□□□ -2.39
SCFD1-214ENST00000554819 A0A0C4DFX4 3053 aa0.14□□□□□ -2.39
SCFD1-214ENST00000554819 SCN10AQ9Y5Y9 1956 aa0.14□□□□□ -2.39
SCFD1-214ENST00000554819 PKD1L1Q8TDX9 2849 aa0.14□□□□□ -2.39
SCFD1-214ENST00000554819 MYO18AQ92614 2054 aaKnown RBP0.14□□□□□ -2.39
SCFD1-214ENST00000554819 REV3LO60673 3130 aa0.13□□□□□ -2.39
SCFD1-214ENST00000554819 CHD3Q12873 2000 aaKnown RBP0.13□□□□□ -2.39
SCFD1-214ENST00000554819 A8MWV9 139 aa0.13□□□□□ -2.39
SCFD1-214ENST00000554819 E7EUB6 86 aa0.13□□□□□ -2.39
SCFD1-214ENST00000554819 M0R378 163 aa0.13□□□□□ -2.39
SCFD1-214ENST00000554819 OR7C1O76099 320 aaPredicted RBP0.13□□□□□ -2.39
SCFD1-214ENST00000554819 CYBAP13498 195 aa0.13□□□□□ -2.39
SCFD1-214ENST00000554819 CDKN2CP42773 168 aa0.13□□□□□ -2.39
SCFD1-214ENST00000554819 DSCR4P56555 118 aaPredicted RBP0.13□□□□□ -2.39
SCFD1-214ENST00000554819 ITGB3BPQ13352 177 aaPredicted RBP0.13□□□□□ -2.39
SCFD1-214ENST00000554819 KRR1Q13601 381 aaKnown RBP0.13□□□□□ -2.39
SCFD1-214ENST00000554819 C4orf22Q6V702 233 aa0.13□□□□□ -2.39
SCFD1-214ENST00000554819 PDZD9Q8IXQ8 264 aa0.13□□□□□ -2.39
SCFD1-214ENST00000554819 OR10K1Q8NGX5 313 aa0.13□□□□□ -2.39
SCFD1-214ENST00000554819 CANT1Q8WVQ1 401 aa0.13□□□□□ -2.39
SCFD1-214ENST00000554819 PSMF1Q92530 271 aa0.13□□□□□ -2.39
SCFD1-214ENST00000554819 PSTPIP2Q9H939 334 aa0.13□□□□□ -2.39
SCFD1-214ENST00000554819 UCK1Q9HA47 277 aa0.13□□□□□ -2.39
SCFD1-214ENST00000554819 CECR2Q9BXF3 1484 aa0.13□□□□□ -2.39
SCFD1-214ENST00000554819 CACNA1HO95180 2353 aa0.13□□□□□ -2.39
SCFD1-214ENST00000554819 CEP350Q5VT06 3117 aa0.13□□□□□ -2.39
SCFD1-214ENST00000554819 ARHGEF11O15085 1522 aa0.13□□□□□ -2.39
SCFD1-214ENST00000554819 MKI67P46013 3256 aaKnown RBP0.12□□□□□ -2.39
SCFD1-214ENST00000554819 UNC80Q8N2C7 3258 aa0.12□□□□□ -2.39
SCFD1-214ENST00000554819 WDR87Q6ZQQ6 2873 aa0.12□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms