RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 PEX7O00628 323 aa8.85□□□□□ -0.99
SRP54-205ENST00000554803 EREGO14944 169 aa8.85□□□□□ -0.99
SRP54-205ENST00000554803 FSTL3O95633 263 aa8.85□□□□□ -0.99
SRP54-205ENST00000554803 SNRPCP09234 159 aaKnown RBP8.85□□□□□ -0.99
SRP54-205ENST00000554803 SELLP14151 372 aa8.85□□□□□ -0.99
SRP54-205ENST00000554803 GPR6P46095 362 aaPredicted RBP8.85□□□□□ -0.99
SRP54-205ENST00000554803 AMTP48728 403 aa8.85□□□□□ -0.99
SRP54-205ENST00000554803 LINC00310P59036 64 aa8.85□□□□□ -0.99
SRP54-205ENST00000554803 LINC00205P59089 165 aa8.85□□□□□ -0.99
SRP54-205ENST00000554803 DUX4L9Q6RFH8 374 aaPredicted RBP8.85□□□□□ -0.99
SRP54-205ENST00000554803 ZNF705AQ6ZN79 300 aaPredicted RBP8.85□□□□□ -0.99
SRP54-205ENST00000554803 DEFB108BQ8NET1 73 aa8.85□□□□□ -0.99
SRP54-205ENST00000554803 TSKUQ8WUA8 353 aa8.85□□□□□ -0.99
SRP54-205ENST00000554803 ZNF503Q96F45 646 aa8.85□□□□□ -0.99
SRP54-205ENST00000554803 FAM167A-AS1Q96KT0 104 aa8.85□□□□□ -0.99
SRP54-205ENST00000554803 TRGV9Q99603 122 aa8.85□□□□□ -0.99
SRP54-205ENST00000554803 NRN1Q9NPD7 142 aa8.85□□□□□ -0.99
SRP54-205ENST00000554803 AURKAIP1Q9NWT8 199 aaPredicted RBP8.85□□□□□ -0.99
SRP54-205ENST00000554803 COL7A1Q02388 2944 aa8.84□□□□□ -0.99
SRP54-205ENST00000554803 DOCK11Q5JSL3 2073 aa8.84□□□□□ -0.99
SRP54-205ENST00000554803 FOXH1O75593 365 aa8.84□□□□□ -0.99
SRP54-205ENST00000554803 ACTL6BO94805 426 aa8.84□□□□□ -0.99
SRP54-205ENST00000554803 PRTN3P24158 256 aa8.84□□□□□ -0.99
SRP54-205ENST00000554803 PLP1P60201 277 aa8.84□□□□□ -0.99
SRP54-205ENST00000554803 LRRC10Q5BKY1 277 aa8.84□□□□□ -0.99
SRP54-205ENST00000554803 TEX45Q8NA69 505 aa8.84□□□□□ -0.99
SRP54-205ENST00000554803 FMC1Q96HJ9 113 aa8.84□□□□□ -0.99
SRP54-205ENST00000554803 RNF5Q99942 180 aa8.84□□□□□ -0.99
SRP54-205ENST00000554803 KAAG1Q9UBP8 84 aa8.84□□□□□ -0.99
SRP54-205ENST00000554803 DNAH3Q8TD57 4116 aa8.83□□□□□ -1
SRP54-205ENST00000554803 IGKV1OR2-108A0A075B7D4 117 aa8.83□□□□□ -1
SRP54-205ENST00000554803 A0A1B0GW15 77 aa8.83□□□□□ -1
SRP54-205ENST00000554803 A0A1W2PS18 150 aa8.83□□□□□ -1
SRP54-205ENST00000554803 A8MWL6 223 aa8.83□□□□□ -1
SRP54-205ENST00000554803 NUPR1O60356 82 aa8.83□□□□□ -1
SRP54-205ENST00000554803 RBP4P02753 201 aa8.83□□□□□ -1
SRP54-205ENST00000554803 CRYGCP07315 174 aa8.83□□□□□ -1
SRP54-205ENST00000554803 OR5AL1P0C617 328 aa8.83□□□□□ -1
SRP54-205ENST00000554803 MYCNOSP40205 109 aa8.83□□□□□ -1
SRP54-205ENST00000554803 CTRLP40313 264 aa8.83□□□□□ -1
SRP54-205ENST00000554803 UBE2G1P62253 170 aa8.83□□□□□ -1
SRP54-205ENST00000554803 OR5I1Q13606 314 aa8.83□□□□□ -1
SRP54-205ENST00000554803 C5orf17Q8NAS9 161 aa8.83□□□□□ -1
SRP54-205ENST00000554803 OR9G1Q8NH87 305 aa8.83□□□□□ -1
SRP54-205ENST00000554803 CHCHD1Q96BP2 118 aaKnown RBP8.83□□□□□ -1
SRP54-205ENST00000554803 TMEM68Q96MH6 324 aa8.83□□□□□ -1
SRP54-205ENST00000554803 SLC25A2Q9BXI2 301 aa8.83□□□□□ -1
SRP54-205ENST00000554803 MRPS16Q9Y3D3 137 aaKnown RBP8.83□□□□□ -1
SRP54-205ENST00000554803 BIRC6Q9NR09 4857 aa8.82□□□□□ -1
SRP54-205ENST00000554803 PPIAL4EA0A075B759 164 aa8.82□□□□□ -1
SRP54-205ENST00000554803 PPIAL4DF5H284 164 aa8.82□□□□□ -1
SRP54-205ENST00000554803 BMPR1BO00238 502 aa8.82□□□□□ -1
SRP54-205ENST00000554803 DLEU1O43261 78 aa8.82□□□□□ -1
SRP54-205ENST00000554803 NDUFB3O43676 98 aa8.82□□□□□ -1
SRP54-205ENST00000554803 FCN3O75636 299 aa8.82□□□□□ -1
SRP54-205ENST00000554803 PPIAL4FP0DN26 164 aa8.82□□□□□ -1
SRP54-205ENST00000554803 MGST1P10620 155 aaKnown RBP8.82□□□□□ -1
SRP54-205ENST00000554803 SRIP30626 198 aa8.82□□□□□ -1
SRP54-205ENST00000554803 REG1BP48304 166 aa8.82□□□□□ -1
SRP54-205ENST00000554803 PRSS8Q16651 343 aa8.82□□□□□ -1
SRP54-205ENST00000554803 LYPD2Q6UXB3 125 aa8.82□□□□□ -1
SRP54-205ENST00000554803 ZNF329Q86UD4 541 aa8.82□□□□□ -1
SRP54-205ENST00000554803 FAM216BQ8N7L0 139 aa8.82□□□□□ -1
SRP54-205ENST00000554803 VN1R17PQ8TDU5 208 aa8.82□□□□□ -1
SRP54-205ENST00000554803 TIMD4Q96H15 378 aa8.82□□□□□ -1
SRP54-205ENST00000554803 GPR82Q96P67 336 aa8.82□□□□□ -1
SRP54-205ENST00000554803 CCL13Q99616 98 aa8.82□□□□□ -1
SRP54-205ENST00000554803 ATG101Q9BSB4 218 aa8.82□□□□□ -1
SRP54-205ENST00000554803 MRPL20Q9BYC9 149 aaKnown RBP8.82□□□□□ -1
SRP54-205ENST00000554803 EPDR1Q9UM22 224 aa8.82□□□□□ -1
SRP54-205ENST00000554803 EPPK1P58107 5090 aaKnown RBP8.82□□□□□ -1
SRP54-205ENST00000554803 TET2Q6N021 2002 aaPredicted RBP8.81□□□□□ -1
SRP54-205ENST00000554803 PLXNB1O43157 2135 aa8.81□□□□□ -1
SRP54-205ENST00000554803 DNAJC9-AS1A6NH13 148 aa8.81□□□□□ -1
SRP54-205ENST00000554803 SRRM4A7MD48 611 aaKnown RBP8.81□□□□□ -1
SRP54-205ENST00000554803 TNFRSF13BO14836 293 aaPredicted RBP8.81□□□□□ -1
SRP54-205ENST00000554803 TOMM40O96008 361 aa8.81□□□□□ -1
SRP54-205ENST00000554803 FSHBP01225 129 aa8.81□□□□□ -1
SRP54-205ENST00000554803 IGKV1-16P04430 117 aa8.81□□□□□ -1
SRP54-205ENST00000554803 GATA3P23771 443 aa8.81□□□□□ -1
SRP54-205ENST00000554803 GNG10P50151 68 aa8.81□□□□□ -1
SRP54-205ENST00000554803 KRTDAPP60985 99 aa8.81□□□□□ -1
SRP54-205ENST00000554803 LMO4P61968 165 aa8.81□□□□□ -1
SRP54-205ENST00000554803 NHLRC2Q8NBF2 726 aa8.81□□□□□ -1
SRP54-205ENST00000554803 TMEM116Q8NCL8 245 aa8.81□□□□□ -1
SRP54-205ENST00000554803 ST6GALNAC6Q969X2 333 aa8.81□□□□□ -1
SRP54-205ENST00000554803 RNASE7Q9H1E1 156 aaKnown RBP8.81□□□□□ -1
SRP54-205ENST00000554803 ZNF355PQ9NSJ1 428 aa8.81□□□□□ -1
SRP54-205ENST00000554803 SERTAD4Q9NUC0 356 aa8.81□□□□□ -1
SRP54-205ENST00000554803 TMEM14CQ9P0S9 112 aa8.81□□□□□ -1
SRP54-205ENST00000554803 CTSZQ9UBR2 303 aa8.81□□□□□ -1
SRP54-205ENST00000554803 FBXL7Q9UJT9 491 aa8.81□□□□□ -1
SRP54-205ENST00000554803 ZFP30Q9Y2G7 519 aa8.81□□□□□ -1
SRP54-205ENST00000554803 A0A1B0GXF2 115 aa8.8□□□□□ -1
SRP54-205ENST00000554803 FBLL1A6NHQ2 334 aaKnown RBP8.8□□□□□ -1
SRP54-205ENST00000554803 J3QLI3 93 aa8.8□□□□□ -1
SRP54-205ENST00000554803 M0QZ24 198 aa8.8□□□□□ -1
SRP54-205ENST00000554803 HSBP1O75506 76 aa8.8□□□□□ -1
SRP54-205ENST00000554803 RNASE1P07998 156 aaKnown RBP8.8□□□□□ -1
SRP54-205ENST00000554803 HBBP68871 147 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms