RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 GPER1Q99527 375 aa0.91□□□□□ -2.26
SCFD1-213ENST00000554776 GGACTQ9BVM4 153 aa0.91□□□□□ -2.26
SCFD1-213ENST00000554776 SH3BGRL3Q9H299 93 aa0.91□□□□□ -2.26
SCFD1-213ENST00000554776 POPDC3Q9HBV1 291 aa0.91□□□□□ -2.26
SCFD1-213ENST00000554776 NUP98P52948 1817 aa0.91□□□□□ -2.26
SCFD1-213ENST00000554776 MYH3P11055 1940 aa0.91□□□□□ -2.26
SCFD1-213ENST00000554776 MYH2Q9UKX2 1941 aa0.91□□□□□ -2.26
SCFD1-213ENST00000554776 UHRF1BP1Q6BDS2 1440 aa0.9□□□□□ -2.26
SCFD1-213ENST00000554776 NCOA6Q14686 2063 aaPredicted RBP0.9□□□□□ -2.26
SCFD1-213ENST00000554776 E5RI56 91 aa0.9□□□□□ -2.27
SCFD1-213ENST00000554776 DHFRP00374 187 aa0.9□□□□□ -2.27
SCFD1-213ENST00000554776 S100A5P33763 92 aa0.9□□□□□ -2.27
SCFD1-213ENST00000554776 MYL5Q02045 173 aa0.9□□□□□ -2.27
SCFD1-213ENST00000554776 LTC4SQ16873 150 aa0.9□□□□□ -2.27
SCFD1-213ENST00000554776 SCGB2B2Q4G0G5 96 aa0.9□□□□□ -2.27
SCFD1-213ENST00000554776 TRIQKQ629K1 86 aa0.9□□□□□ -2.27
SCFD1-213ENST00000554776 PATE2Q6UY27 113 aa0.9□□□□□ -2.27
SCFD1-213ENST00000554776 FAM19A2Q8N3H0 131 aa0.9□□□□□ -2.27
SCFD1-213ENST00000554776 STX19Q8N4C7 294 aa0.9□□□□□ -2.27
SCFD1-213ENST00000554776 PPTC7Q8NI37 304 aa0.9□□□□□ -2.27
SCFD1-213ENST00000554776 POP5Q969H6 163 aaKnown RBP0.9□□□□□ -2.27
SCFD1-213ENST00000554776 ZNF714Q96N38 554 aa0.9□□□□□ -2.27
SCFD1-213ENST00000554776 CHCHD2Q9Y6H1 151 aaPredicted RBP0.9□□□□□ -2.27
SCFD1-213ENST00000554776 LY96Q9Y6Y9 160 aa0.9□□□□□ -2.27
SCFD1-213ENST00000554776 FLG2Q5D862 2391 aaPredicted RBP0.89□□□□□ -2.27
SCFD1-213ENST00000554776 LOC110117498A0A087WWA1 95 aa0.89□□□□□ -2.27
SCFD1-213ENST00000554776 M0R233 179 aa0.89□□□□□ -2.27
SCFD1-213ENST00000554776 APOA2P02652 100 aa0.89□□□□□ -2.27
SCFD1-213ENST00000554776 OGNP20774 298 aaKnown RBP0.89□□□□□ -2.27
SCFD1-213ENST00000554776 SERPINB1P30740 379 aa0.89□□□□□ -2.27
SCFD1-213ENST00000554776 C1orf134Q5TEV5 83 aa0.89□□□□□ -2.27
SCFD1-213ENST00000554776 C3orf33Q6P1S2 294 aa0.89□□□□□ -2.27
SCFD1-213ENST00000554776 GRINAQ7Z429 371 aa0.89□□□□□ -2.27
SCFD1-213ENST00000554776 BORCS5Q969J3 196 aa0.89□□□□□ -2.27
SCFD1-213ENST00000554776 RAB37Q96AX2 223 aa0.89□□□□□ -2.27
SCFD1-213ENST00000554776 CHCHD1Q96BP2 118 aaKnown RBP0.89□□□□□ -2.27
SCFD1-213ENST00000554776 TEX37Q96LM6 180 aa0.89□□□□□ -2.27
SCFD1-213ENST00000554776 LINC00467Q9BRT7 94 aa0.89□□□□□ -2.27
SCFD1-213ENST00000554776 PBOV1Q9GZY1 135 aa0.89□□□□□ -2.27
SCFD1-213ENST00000554776 HEATR1Q9H583 2144 aaKnown RBP0.89□□□□□ -2.27
SCFD1-213ENST00000554776 TNRC6AQ8NDV7 1962 aaKnown RBP0.88□□□□□ -2.27
SCFD1-213ENST00000554776 LAMB4A4D0S4 1761 aa0.88□□□□□ -2.27
SCFD1-213ENST00000554776 UBR2Q8IWV8 1755 aa0.88□□□□□ -2.27
SCFD1-213ENST00000554776 TRAV10A0A0B4J240 114 aa0.88□□□□□ -2.27
SCFD1-213ENST00000554776 IFNA14P01570 189 aa0.88□□□□□ -2.27
SCFD1-213ENST00000554776 IGLV1-51P01701 117 aa0.88□□□□□ -2.27
SCFD1-213ENST00000554776 ARL14EPLP0DKL9 152 aa0.88□□□□□ -2.27
SCFD1-213ENST00000554776 TCTAP57738 103 aa0.88□□□□□ -2.27
SCFD1-213ENST00000554776 FAM74A1Q5RGS3 127 aa0.88□□□□□ -2.27
SCFD1-213ENST00000554776 FKBP1CQ5VVH2 108 aa0.88□□□□□ -2.27
SCFD1-213ENST00000554776 C4orf22Q6V702 233 aa0.88□□□□□ -2.27
SCFD1-213ENST00000554776 FAM24BQ8N5W8 94 aa0.88□□□□□ -2.27
SCFD1-213ENST00000554776 OR5D16Q8NGK9 328 aa0.88□□□□□ -2.27
SCFD1-213ENST00000554776 Q8TAT8 98 aa0.88□□□□□ -2.27
SCFD1-213ENST00000554776 DYDC1Q8WWB3 177 aa0.88□□□□□ -2.27
SCFD1-213ENST00000554776 PATE1Q8WXA2 126 aa0.88□□□□□ -2.27
SCFD1-213ENST00000554776 CARD19Q96LW7 228 aa0.88□□□□□ -2.27
SCFD1-213ENST00000554776 IL20Q9NYY1 176 aa0.88□□□□□ -2.27
SCFD1-213ENST00000554776 MED11Q9P086 117 aa0.88□□□□□ -2.27
SCFD1-213ENST00000554776 OR52A1Q9UKL2 312 aa0.88□□□□□ -2.27
SCFD1-213ENST00000554776 ASB4Q9Y574 426 aa0.88□□□□□ -2.27
SCFD1-213ENST00000554776 MCM3APO60318 1980 aa0.88□□□□□ -2.27
SCFD1-213ENST00000554776 ROS1P08922 2347 aa0.88□□□□□ -2.27
SCFD1-213ENST00000554776 MGAMO43451 1857 aa0.88□□□□□ -2.27
SCFD1-213ENST00000554776 CD109Q6YHK3 1445 aa0.88□□□□□ -2.27
SCFD1-213ENST00000554776 SYNMO15061 1565 aa0.87□□□□□ -2.27
SCFD1-213ENST00000554776 TENM1Q9UKZ4 2725 aa0.87□□□□□ -2.27
SCFD1-213ENST00000554776 CCL25O15444 150 aa0.87□□□□□ -2.27
SCFD1-213ENST00000554776 CCL16O15467 120 aa0.87□□□□□ -2.27
SCFD1-213ENST00000554776 KLF7O75840 302 aaPredicted RBP0.87□□□□□ -2.27
SCFD1-213ENST00000554776 FABP1P07148 127 aa0.87□□□□□ -2.27
SCFD1-213ENST00000554776 IDO1P14902 403 aa0.87□□□□□ -2.27
SCFD1-213ENST00000554776 CDK6Q00534 326 aa0.87□□□□□ -2.27
SCFD1-213ENST00000554776 KLRD1Q13241 179 aa0.87□□□□□ -2.27
SCFD1-213ENST00000554776 MPV17LQ2QL34 196 aa0.87□□□□□ -2.27
SCFD1-213ENST00000554776 GDF5OSQ5U4N7 250 aa0.87□□□□□ -2.27
SCFD1-213ENST00000554776 MALSU1Q96EH3 234 aa0.87□□□□□ -2.27
SCFD1-213ENST00000554776 PCBD2Q9H0N5 130 aa0.87□□□□□ -2.27
SCFD1-213ENST00000554776 CACYBPQ9HB71 228 aaKnown RBP0.87□□□□□ -2.27
SCFD1-213ENST00000554776 BIN3Q9NQY0 253 aa0.87□□□□□ -2.27
SCFD1-213ENST00000554776 RNF11Q9Y3C5 154 aa0.87□□□□□ -2.27
SCFD1-213ENST00000554776 PLXNA4Q9HCM2 1894 aa0.86□□□□□ -2.27
SCFD1-213ENST00000554776 TRBV6-4A0A1B0GX49 114 aa0.86□□□□□ -2.27
SCFD1-213ENST00000554776 OR2T8A6NH00 312 aa0.86□□□□□ -2.27
SCFD1-213ENST00000554776 E7EUB6 86 aa0.86□□□□□ -2.27
SCFD1-213ENST00000554776 INE1O15225 51 aa0.86□□□□□ -2.27
SCFD1-213ENST00000554776 RER1O15258 196 aa0.86□□□□□ -2.27
SCFD1-213ENST00000554776 DSCR4P56555 118 aaPredicted RBP0.86□□□□□ -2.27
SCFD1-213ENST00000554776 VBP1P61758 197 aa0.86□□□□□ -2.27
SCFD1-213ENST00000554776 EIF3IQ13347 325 aaKnown RBP0.86□□□□□ -2.27
SCFD1-213ENST00000554776 RTL8BQ17RB0 113 aa0.86□□□□□ -2.27
SCFD1-213ENST00000554776 C1orf140Q5VVS0 124 aa0.86□□□□□ -2.27
SCFD1-213ENST00000554776 C2orf82Q6UX34 121 aa0.86□□□□□ -2.27
SCFD1-213ENST00000554776 TMEM14EPQ6UXP3 125 aa0.86□□□□□ -2.27
SCFD1-213ENST00000554776 ZNF833PQ6ZTB9 187 aa0.86□□□□□ -2.27
SCFD1-213ENST00000554776 C4orf3Q8WVX3 66 aa0.86□□□□□ -2.27
SCFD1-213ENST00000554776 LINC00052Q96N35 136 aa0.86□□□□□ -2.27
SCFD1-213ENST00000554776 TP53RKQ96S44 253 aa0.86□□□□□ -2.27
SCFD1-213ENST00000554776 TMEM70Q9BUB7 260 aa0.86□□□□□ -2.27
SCFD1-213ENST00000554776 RTL8AQ9BWD3 113 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms