RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 SORL1Q92673 2214 aa4.45□□□□□ -1.7
ATXN3-230ENST00000554673 BORCS7-ASMTA0A0B4J1R7 106 aa4.45□□□□□ -1.7
ATXN3-230ENST00000554673 TRAV41A0A0B4J266 112 aa4.45□□□□□ -1.7
ATXN3-230ENST00000554673 SMCO3A2RU48 225 aa4.45□□□□□ -1.7
ATXN3-230ENST00000554673 GGTLC3B5MD39 225 aa4.45□□□□□ -1.7
ATXN3-230ENST00000554673 H3BTX0 84 aa4.45□□□□□ -1.7
ATXN3-230ENST00000554673 SLC17A3O00476 420 aa4.45□□□□□ -1.7
ATXN3-230ENST00000554673 CLN5O75503 358 aa4.45□□□□□ -1.7
ATXN3-230ENST00000554673 DFFBO76075 338 aa4.45□□□□□ -1.7
ATXN3-230ENST00000554673 STAG3L2P0CL84 134 aa4.45□□□□□ -1.7
ATXN3-230ENST00000554673 STAG3L3P0CL85 134 aa4.45□□□□□ -1.7
ATXN3-230ENST00000554673 ARL14EPLP0DKL9 152 aa4.45□□□□□ -1.7
ATXN3-230ENST00000554673 GP9P14770 177 aa4.45□□□□□ -1.7
ATXN3-230ENST00000554673 PSMB8P28062 276 aa4.45□□□□□ -1.7
ATXN3-230ENST00000554673 BRS3P32247 399 aa4.45□□□□□ -1.7
ATXN3-230ENST00000554673 NPBWR1P48145 328 aa4.45□□□□□ -1.7
ATXN3-230ENST00000554673 B2MP61769 119 aa4.45□□□□□ -1.7
ATXN3-230ENST00000554673 ZNF266Q14584 549 aa4.45□□□□□ -1.7
ATXN3-230ENST00000554673 PLGLAQ15195 96 aa4.45□□□□□ -1.7
ATXN3-230ENST00000554673 AKIRIN2Q53H80 203 aa4.45□□□□□ -1.7
ATXN3-230ENST00000554673 AWAT1Q58HT5 328 aa4.45□□□□□ -1.7
ATXN3-230ENST00000554673 ZNF506Q5JVG8 444 aa4.45□□□□□ -1.7
ATXN3-230ENST00000554673 OR10G4Q8NGN3 311 aa4.45□□□□□ -1.7
ATXN3-230ENST00000554673 OR10G9Q8NGN4 311 aa4.45□□□□□ -1.7
ATXN3-230ENST00000554673 OR10G7Q8NGN6 311 aa4.45□□□□□ -1.7
ATXN3-230ENST00000554673 NANPQ8TBE9 248 aa4.45□□□□□ -1.7
ATXN3-230ENST00000554673 CACNG8Q8WXS5 425 aa4.45□□□□□ -1.7
ATXN3-230ENST00000554673 FXYD5Q96DB9 178 aa4.45□□□□□ -1.7
ATXN3-230ENST00000554673 FAM210AQ96ND0 272 aa4.45□□□□□ -1.7
ATXN3-230ENST00000554673 DERL1Q9BUN8 251 aa4.45□□□□□ -1.7
ATXN3-230ENST00000554673 TM2D2Q9BX73 214 aa4.45□□□□□ -1.7
ATXN3-230ENST00000554673 NPVFQ9HCQ7 196 aa4.45□□□□□ -1.7
ATXN3-230ENST00000554673 FBN1P35555 2871 aaKnown RBP4.45□□□□□ -1.7
ATXN3-230ENST00000554673 VWFP04275 2813 aa4.45□□□□□ -1.7
ATXN3-230ENST00000554673 MAP1LC3B2A6NCE7 125 aa4.44□□□□□ -1.7
ATXN3-230ENST00000554673 H3BRN7 92 aa4.44□□□□□ -1.7
ATXN3-230ENST00000554673 CNIH1O95406 144 aa4.44□□□□□ -1.7
ATXN3-230ENST00000554673 BRI3O95415 125 aa4.44□□□□□ -1.7
ATXN3-230ENST00000554673 IGHV3-11P01762 117 aa4.44□□□□□ -1.7
ATXN3-230ENST00000554673 M6PRP20645 277 aa4.44□□□□□ -1.7
ATXN3-230ENST00000554673 HLA-DMBP28068 263 aa4.44□□□□□ -1.7
ATXN3-230ENST00000554673 FCGR2BP31994 310 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-230ENST00000554673 NUP62P37198 522 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-230ENST00000554673 DEFB1P60022 68 aa4.44□□□□□ -1.7
ATXN3-230ENST00000554673 HBG1P69891 147 aa4.44□□□□□ -1.7
ATXN3-230ENST00000554673 HBG2P69892 147 aa4.44□□□□□ -1.7
ATXN3-230ENST00000554673 ERHP84090 104 aaKnown RBP4.44□□□□□ -1.7
ATXN3-230ENST00000554673 C15orf32Q32M92 178 aa4.44□□□□□ -1.7
ATXN3-230ENST00000554673 PRR27Q6MZM9 219 aa4.44□□□□□ -1.7
ATXN3-230ENST00000554673 SLC35E3Q7Z769 313 aa4.44□□□□□ -1.7
ATXN3-230ENST00000554673 ZNF575Q86XF7 245 aa4.44□□□□□ -1.7
ATXN3-230ENST00000554673 OR51G1Q8NGK1 321 aa4.44□□□□□ -1.7
ATXN3-230ENST00000554673 SFT2D1Q8WV19 159 aa4.44□□□□□ -1.7
ATXN3-230ENST00000554673 MARC2Q969Z3 335 aa4.44□□□□□ -1.7
ATXN3-230ENST00000554673 GNPNAT1Q96EK6 184 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-230ENST00000554673 SLC35E1Q96K37 410 aa4.44□□□□□ -1.7
ATXN3-230ENST00000554673 YPEL4Q96NS1 127 aa4.44□□□□□ -1.7
ATXN3-230ENST00000554673 ASCL2Q99929 193 aa4.44□□□□□ -1.7
ATXN3-230ENST00000554673 RASL11BQ9BPW5 248 aa4.44□□□□□ -1.7
ATXN3-230ENST00000554673 MAP1LC3BQ9GZQ8 125 aa4.44□□□□□ -1.7
ATXN3-230ENST00000554673 ZNF586Q9NXT0 402 aa4.44□□□□□ -1.7
ATXN3-230ENST00000554673 WNK1Q9H4A3 2382 aa4.44□□□□□ -1.7
ATXN3-230ENST00000554673 HIVEP2P31629 2446 aa4.44□□□□□ -1.7
ATXN3-230ENST00000554673 CMYA5Q8N3K9 4069 aa4.44□□□□□ -1.7
ATXN3-230ENST00000554673 SETD2Q9BYW2 2564 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-230ENST00000554673 IGHV3-49A0A0A0MS15 119 aa4.43□□□□□ -1.7
ATXN3-230ENST00000554673 CTXND1A0A1B0GTU2 59 aa4.43□□□□□ -1.7
ATXN3-230ENST00000554673 TMEM218A2RU14 115 aa4.43□□□□□ -1.7
ATXN3-230ENST00000554673 RAB19A4D1S5 217 aa4.43□□□□□ -1.7
ATXN3-230ENST00000554673 OR2T8A6NH00 312 aa4.43□□□□□ -1.7
ATXN3-230ENST00000554673 FAM74A7A6NL05 159 aa4.43□□□□□ -1.7
ATXN3-230ENST00000554673 M0QZ24 198 aa4.43□□□□□ -1.7
ATXN3-230ENST00000554673 TOMM40O96008 361 aa4.43□□□□□ -1.7
ATXN3-230ENST00000554673 IFNA5P01569 189 aa4.43□□□□□ -1.7
ATXN3-230ENST00000554673 IGLV2-8P01709 118 aa4.43□□□□□ -1.7
ATXN3-230ENST00000554673 IGLC2P0DOY2 106 aa4.43□□□□□ -1.7
ATXN3-230ENST00000554673 GCHFRP30047 84 aa4.43□□□□□ -1.7
ATXN3-230ENST00000554673 GPR183P32249 361 aa4.43□□□□□ -1.7
ATXN3-230ENST00000554673 CDC34P49427 236 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-230ENST00000554673 ATP5IP56385 69 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-230ENST00000554673 RAB11AP62491 216 aa4.43□□□□□ -1.7
ATXN3-230ENST00000554673 SERF2P84101 59 aa4.43□□□□□ -1.7
ATXN3-230ENST00000554673 ZNF616Q08AN1 781 aa4.43□□□□□ -1.7
ATXN3-230ENST00000554673 GUK1Q16774 197 aa4.43□□□□□ -1.7
ATXN3-230ENST00000554673 FAM74A3Q4VXF1 159 aa4.43□□□□□ -1.7
ATXN3-230ENST00000554673 TOMM20LQ6UXN7 152 aa4.43□□□□□ -1.7
ATXN3-230ENST00000554673 CLEC19AQ6UXS0 136 aa4.43□□□□□ -1.7
ATXN3-230ENST00000554673 IL34Q6ZMJ4 242 aa4.43□□□□□ -1.7
ATXN3-230ENST00000554673 DUX3Q96PT4 197 aa4.43□□□□□ -1.7
ATXN3-230ENST00000554673 OR5B12Q96R08 314 aa4.43□□□□□ -1.7
ATXN3-230ENST00000554673 ZNF355PQ9NSJ1 428 aa4.43□□□□□ -1.7
ATXN3-230ENST00000554673 C21orf62Q9NYP8 219 aa4.43□□□□□ -1.7
ATXN3-230ENST00000554673 TECRQ9NZ01 308 aaKnown RBP4.43□□□□□ -1.7
ATXN3-230ENST00000554673 CARHSP1Q9Y2V2 147 aaKnown RBP4.43□□□□□ -1.7
ATXN3-230ENST00000554673 NIPBLQ6KC79 2804 aaeCLIP4.42□□□□□ -1.7
ATXN3-230ENST00000554673 IGHV4OR15-8A0A075B7B6 117 aa4.42□□□□□ -1.7
ATXN3-230ENST00000554673 IGHV3OR16-13A0A075B7E8 117 aa4.42□□□□□ -1.7
ATXN3-230ENST00000554673 A0A087WW49 117 aa4.42□□□□□ -1.7
ATXN3-230ENST00000554673 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.42□□□□□ -1.7
ATXN3-230ENST00000554673 IGHV3-74A0A0B4J1X5 117 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms