RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 C22orf39Q6P5X5 142 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 ANKRD37Q7Z713 158 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 TRPT1Q86TN4 253 aaKnown RBP3.52□□□□□ -1.85
ATXN3-227ENST00000554491 BPIFA4PQ86YQ2 179 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 C3orf22Q8N5N4 141 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 TPRX1Q8N7U7 411 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 OR8B3Q8NGG8 313 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 OR2AJ1Q8NGZ0 328 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 OR9G1Q8NH87 305 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 CLDND2Q8NHS1 167 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 LMX1AQ8TE12 382 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 CT55Q8WUE5 264 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 PPDPFLQ8WWR9 84 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 LSM10Q969L4 123 aaKnown RBP3.52□□□□□ -1.85
ATXN3-227ENST00000554491 LINC00526Q96FQ7 95 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 SLC25A44Q96H78 314 aaPredicted RBP3.52□□□□□ -1.85
ATXN3-227ENST00000554491 URB1-AS1Q96HZ7 61 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 KCNS1Q96KK3 526 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 C9orf85Q96MD7 179 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 OR8B2Q96RD0 313 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 AMELYQ99218 206 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 PBOV1Q9GZY1 135 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 C5orf66Q9H5L9 145 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 NAA60Q9H7X0 242 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 MAP6D1Q9H9H5 199 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 BCL2L10Q9HD36 194 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 TP53TG3Q9ULZ0 132 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 OR1A2Q9Y585 309 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 CHD3Q12873 2000 aaKnown RBP3.52□□□□□ -1.85
ATXN3-227ENST00000554491 ABCA4P78363 2273 aa3.52□□□□□ -1.85
ATXN3-227ENST00000554491 TMED7-TICAM2A0A0A6YYA0 188 aa3.51□□□□□ -1.85
ATXN3-227ENST00000554491 SPTY2D1-AS1A0A0U1RR47 76 aa3.51□□□□□ -1.85
ATXN3-227ENST00000554491 FAM236DA0A1B0GTK5 79 aa3.51□□□□□ -1.85
ATXN3-227ENST00000554491 C15orf61A6NNL5 157 aa3.51□□□□□ -1.85
ATXN3-227ENST00000554491 M0R2P5 195 aa3.51□□□□□ -1.85
ATXN3-227ENST00000554491 ZNF324O75467 553 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-227ENST00000554491 C1orf105O95561 183 aa3.51□□□□□ -1.85
ATXN3-227ENST00000554491 CPSF4O95639 269 aaKnown RBP3.51□□□□□ -1.85
ATXN3-227ENST00000554491 IGHV3-7P01780 117 aa3.51□□□□□ -1.85
ATXN3-227ENST00000554491 IGHG1P01857 330 aa3.51□□□□□ -1.85
ATXN3-227ENST00000554491 ZNF688P0C7X2 276 aa3.51□□□□□ -1.85
ATXN3-227ENST00000554491 FAM236CP0DP71 79 aa3.51□□□□□ -1.85
ATXN3-227ENST00000554491 CCL4P13236 92 aa3.51□□□□□ -1.85
ATXN3-227ENST00000554491 CPMP14384 443 aa3.51□□□□□ -1.85
ATXN3-227ENST00000554491 CDAP32320 146 aa3.51□□□□□ -1.85
ATXN3-227ENST00000554491 PPP1CCP36873 323 aaKnown RBP3.51□□□□□ -1.85
ATXN3-227ENST00000554491 RPL13AP40429 203 aaKnown RBP3.51□□□□□ -1.85
ATXN3-227ENST00000554491 NMUP48645 174 aa3.51□□□□□ -1.85
ATXN3-227ENST00000554491 CLDN2P57739 230 aa3.51□□□□□ -1.85
ATXN3-227ENST00000554491 TMEM258P61165 79 aa3.51□□□□□ -1.85
ATXN3-227ENST00000554491 RPS4XP62701 263 aaKnown RBP3.51□□□□□ -1.85
ATXN3-227ENST00000554491 POU3F1Q03052 451 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-227ENST00000554491 ZNF90Q03938 601 aa3.51□□□□□ -1.85
ATXN3-227ENST00000554491 RNPS1Q15287 305 aaKnown RBP3.51□□□□□ -1.85
ATXN3-227ENST00000554491 ZNF141Q15928 474 aa3.51□□□□□ -1.85
ATXN3-227ENST00000554491 RRN3P1Q2M238 152 aa3.51□□□□□ -1.85
ATXN3-227ENST00000554491 CEACAM16Q2WEN9 425 aa3.51□□□□□ -1.85
ATXN3-227ENST00000554491 ETDBQ3ZM63 59 aa3.51□□□□□ -1.85
ATXN3-227ENST00000554491 SYT14P1Q58G82 188 aa3.51□□□□□ -1.85
ATXN3-227ENST00000554491 NMSQ5H8A3 153 aa3.51□□□□□ -1.85
ATXN3-227ENST00000554491 C9orf153Q5TBE3 101 aa3.51□□□□□ -1.85
ATXN3-227ENST00000554491 LCN12Q6JVE5 192 aa3.51□□□□□ -1.85
ATXN3-227ENST00000554491 MFSD12Q6NUT3 480 aa3.51□□□□□ -1.85
ATXN3-227ENST00000554491 SLC25A47Q6Q0C1 308 aa3.51□□□□□ -1.85
ATXN3-227ENST00000554491 ZNF550Q7Z398 422 aa3.51□□□□□ -1.85
ATXN3-227ENST00000554491 MOB3BQ86TA1 216 aa3.51□□□□□ -1.85
ATXN3-227ENST00000554491 SGPP2Q8IWX5 399 aa3.51□□□□□ -1.85
ATXN3-227ENST00000554491 GAPTQ8N292 157 aa3.51□□□□□ -1.85
ATXN3-227ENST00000554491 C10orf126Q8N4M7 172 aa3.51□□□□□ -1.85
ATXN3-227ENST00000554491 GJC3Q8NFK1 279 aa3.51□□□□□ -1.85
ATXN3-227ENST00000554491 OTOSQ8NHW6 89 aa3.51□□□□□ -1.85
ATXN3-227ENST00000554491 WFDC5Q8TCV5 224 aa3.51□□□□□ -1.85
ATXN3-227ENST00000554491 GTSF1Q8WW33 167 aa3.51□□□□□ -1.85
ATXN3-227ENST00000554491 RAB37Q96AX2 223 aa3.51□□□□□ -1.85
ATXN3-227ENST00000554491 CLEC7AQ9BXN2 247 aa3.51□□□□□ -1.85
ATXN3-227ENST00000554491 FBXL15Q9H469 300 aa3.51□□□□□ -1.85
ATXN3-227ENST00000554491 SCRT2Q9NQ03 307 aa3.51□□□□□ -1.85
ATXN3-227ENST00000554491 C21orf62Q9NYP8 219 aa3.51□□□□□ -1.85
ATXN3-227ENST00000554491 PRO0461Q9UI25 63 aa3.51□□□□□ -1.85
ATXN3-227ENST00000554491 VSIG4Q9Y279 399 aa3.51□□□□□ -1.85
ATXN3-227ENST00000554491 CHCHD2Q9Y6H1 151 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-227ENST00000554491 MYO7BQ6PIF6 2116 aa3.5□□□□□ -1.85
ATXN3-227ENST00000554491 NCOA6Q14686 2063 aaPredicted RBP3.5□□□□□ -1.85
ATXN3-227ENST00000554491 TRBV20-1A0A075B6N2 111 aa3.5□□□□□ -1.85
ATXN3-227ENST00000554491 LOC101059948A0A1B0GTJ6 334 aa3.5□□□□□ -1.85
ATXN3-227ENST00000554491 A0A1W2PS18 150 aa3.5□□□□□ -1.85
ATXN3-227ENST00000554491 SHISA9B4DS77 424 aa3.5□□□□□ -1.85
ATXN3-227ENST00000554491 INAFM1C9JVW0 142 aa3.5□□□□□ -1.85
ATXN3-227ENST00000554491 USP17L23D6RBM5 183 aa3.5□□□□□ -1.85
ATXN3-227ENST00000554491 E9PLD3 99 aa3.5□□□□□ -1.85
ATXN3-227ENST00000554491 C11orf98E9PRG8 122 aa3.5□□□□□ -1.85
ATXN3-227ENST00000554491 CHEK1O14757 476 aa3.5□□□□□ -1.85
ATXN3-227ENST00000554491 IFI6P09912 130 aa3.5□□□□□ -1.85
ATXN3-227ENST00000554491 CECR9P0C854 216 aa3.5□□□□□ -1.85
ATXN3-227ENST00000554491 COX8AP10176 69 aa3.5□□□□□ -1.85
ATXN3-227ENST00000554491 IGFBP3P17936 291 aaPredicted RBP3.5□□□□□ -1.85
ATXN3-227ENST00000554491 EDNRAP25101 427 aa3.5□□□□□ -1.85
ATXN3-227ENST00000554491 IL3RAP26951 378 aa3.5□□□□□ -1.85
ATXN3-227ENST00000554491 CD70P32970 193 aa3.5□□□□□ -1.85
ATXN3-227ENST00000554491 CRYBA2P53672 197 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms