RNA–Protein interactions for RNA: ENST00000554270.5

PTPN21-205, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 4,008 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-205ENST00000554270 TMEM178BH3BS89 294 aa9.2□□□□□ -0.94
PTPN21-205ENST00000554270 APOHP02749 345 aaPredicted RBP9.2□□□□□ -0.94
PTPN21-205ENST00000554270 C17orf77Q96MU5 243 aa9.2□□□□□ -0.94
PTPN21-205ENST00000554270 TRAV9-2A0A087WT02 112 aa9.19□□□□□ -0.94
PTPN21-205ENST00000554270 A0A087X0K7 114 aa9.19□□□□□ -0.94
PTPN21-205ENST00000554270 CGB3P0DN86 165 aa9.19□□□□□ -0.94
PTPN21-205ENST00000554270 CGB7P0DN87 165 aa9.19□□□□□ -0.94
PTPN21-205ENST00000554270 GDF5OSQ5U4N7 250 aa9.19□□□□□ -0.94
PTPN21-205ENST00000554270 RUSC1-AS1Q66K80 236 aa9.19□□□□□ -0.94
PTPN21-205ENST00000554270 PIP4P1Q86T03 277 aa9.19□□□□□ -0.94
PTPN21-205ENST00000554270 FAM167A-AS1Q96KT0 104 aa9.19□□□□□ -0.94
PTPN21-205ENST00000554270 ASH1LQ9NR48 2969 aaKnown RBP9.19□□□□□ -0.94
PTPN21-205ENST00000554270 IGLV2-8P01709 118 aa9.19□□□□□ -0.94
PTPN21-205ENST00000554270 PPIFP30405 207 aaKnown RBP9.19□□□□□ -0.94
PTPN21-205ENST00000554270 C5orf17Q8NAS9 161 aa9.19□□□□□ -0.94
PTPN21-205ENST00000554270 STXBP6Q8NFX7 210 aa9.19□□□□□ -0.94
PTPN21-205ENST00000554270 F11RQ9Y624 299 aaKnown RBP9.19□□□□□ -0.94
PTPN21-205ENST00000554270 IGKV3-7A0A075B6H7 116 aa9.19□□□□□ -0.94
PTPN21-205ENST00000554270 CD3EP07766 207 aa9.19□□□□□ -0.94
PTPN21-205ENST00000554270 CFHR2P36980 270 aa9.19□□□□□ -0.94
PTPN21-205ENST00000554270 TMUB1Q9BVT8 246 aa9.19□□□□□ -0.94
PTPN21-205ENST00000554270 TNRC6BQ9UPQ9 1833 aaKnown RBP9.18□□□□□ -0.94
PTPN21-205ENST00000554270 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.18□□□□□ -0.94
PTPN21-205ENST00000554270 FBLL1A6NHQ2 334 aaKnown RBP9.18□□□□□ -0.94
PTPN21-205ENST00000554270 ORM1P02763 201 aa9.18□□□□□ -0.94
PTPN21-205ENST00000554270 CSN1S1P47710 185 aa9.18□□□□□ -0.94
PTPN21-205ENST00000554270 NMUP48645 174 aa9.18□□□□□ -0.94
PTPN21-205ENST00000554270 LINC00322Q6ZN03 302 aaPredicted RBP9.18□□□□□ -0.94
PTPN21-205ENST00000554270 ZFP30Q9Y2G7 519 aa9.18□□□□□ -0.94
PTPN21-205ENST00000554270 ACACBO00763 2458 aa9.18□□□□□ -0.94
PTPN21-205ENST00000554270 PPIAL4CA0A0B4J2A2 164 aa9.18□□□□□ -0.94
PTPN21-205ENST00000554270 SMIM27A0A1W2PRY6 76 aa9.18□□□□□ -0.94
PTPN21-205ENST00000554270 PPIAL4GP0DN37 164 aa9.18□□□□□ -0.94
PTPN21-205ENST00000554270 GRNP28799 593 aaKnown RBP9.18□□□□□ -0.94
PTPN21-205ENST00000554270 SLC25A34Q6PIV7 304 aa9.18□□□□□ -0.94
PTPN21-205ENST00000554270 IGFL2Q6UWQ7 119 aa9.18□□□□□ -0.94
PTPN21-205ENST00000554270 FXYD5Q96DB9 178 aa9.18□□□□□ -0.94
PTPN21-205ENST00000554270 LINC00614P0C842 121 aa9.18□□□□□ -0.94
PTPN21-205ENST00000554270 MC5RP33032 325 aa9.18□□□□□ -0.94
PTPN21-205ENST00000554270 Q71RC1 249 aaPredicted RBP9.18□□□□□ -0.94
PTPN21-205ENST00000554270 ALKBH7Q9BT30 221 aaPredicted RBP9.18□□□□□ -0.94
PTPN21-205ENST00000554270 C22orf46C9J442 243 aa9.17□□□□□ -0.94
PTPN21-205ENST00000554270 TCRAP04437 139 aa9.17□□□□□ -0.94
PTPN21-205ENST00000554270 FCER1GP30273 86 aa9.17□□□□□ -0.94
PTPN21-205ENST00000554270 PPP1R27Q86WC6 154 aa9.17□□□□□ -0.94
PTPN21-205ENST00000554270 AAMDCQ9H7C9 122 aa9.17□□□□□ -0.94
PTPN21-205ENST00000554270 LY96Q9Y6Y9 160 aa9.17□□□□□ -0.94
PTPN21-205ENST00000554270 MYO18BQ8IUG5 2567 aa9.17□□□□□ -0.94
PTPN21-205ENST00000554270 TMEM249Q2WGJ8 235 aa9.17□□□□□ -0.94
PTPN21-205ENST00000554270 TMEM167AQ8TBQ9 72 aa9.17□□□□□ -0.94
PTPN21-205ENST00000554270 AP5S1Q9NUS5 200 aa9.17□□□□□ -0.94
PTPN21-205ENST00000554270 E7EQL1 145 aa9.17□□□□□ -0.94
PTPN21-205ENST00000554270 ARMS2P0C7Q2 107 aa9.17□□□□□ -0.94
PTPN21-205ENST00000554270 IGHV1-8P0DP01 117 aa9.17□□□□□ -0.94
PTPN21-205ENST00000554270 KLRD1Q13241 179 aa9.17□□□□□ -0.94
PTPN21-205ENST00000554270 CSMD1Q96PZ7 3565 aa9.16□□□□□ -0.94
PTPN21-205ENST00000554270 RBPMS2Q6ZRY4 209 aaKnown RBP9.16□□□□□ -0.94
PTPN21-205ENST00000554270 TEX45Q8NA69 505 aa9.16□□□□□ -0.94
PTPN21-205ENST00000554270 HIF1ANQ9NWT6 349 aa9.16□□□□□ -0.94
PTPN21-205ENST00000554270 SMKR1H3BMG3 65 aa9.16□□□□□ -0.94
PTPN21-205ENST00000554270 ZNF207O43670 478 aaKnown RBP9.16□□□□□ -0.94
PTPN21-205ENST00000554270 LOXP28300 417 aaPredicted RBP9.16□□□□□ -0.94
PTPN21-205ENST00000554270 GATA4P43694 442 aa9.16□□□□□ -0.94
PTPN21-205ENST00000554270 BPIFA4PQ86YQ2 179 aa9.16□□□□□ -0.94
PTPN21-205ENST00000554270 Q8TAT8 98 aa9.16□□□□□ -0.94
PTPN21-205ENST00000554270 ZNF785A8K8V0 405 aa9.16□□□□□ -0.94
PTPN21-205ENST00000554270 NCR2O95944 276 aa9.16□□□□□ -0.94
PTPN21-205ENST00000554270 RBPJQ06330 500 aa9.16□□□□□ -0.94
PTPN21-205ENST00000554270 PRSS33Q8NF86 280 aa9.16□□□□□ -0.94
PTPN21-205ENST00000554270 OR5AN1Q8NGI8 311 aa9.16□□□□□ -0.94
PTPN21-205ENST00000554270 IGF2BP2-AS1Q96M15 143 aa9.16□□□□□ -0.94
PTPN21-205ENST00000554270 TMEM133Q9H2Q1 129 aa9.16□□□□□ -0.94
PTPN21-205ENST00000554270 THBDP07204 575 aa9.15□□□□□ -0.94
PTPN21-205ENST00000554270 COMPP49747 757 aaPredicted RBP9.15□□□□□ -0.94
PTPN21-205ENST00000554270 TWIST1Q15672 202 aa9.15□□□□□ -0.94
PTPN21-205ENST00000554270 RIGQ13278 110 aa9.15□□□□□ -0.94
PTPN21-205ENST00000554270 ECSCRQ19T08 205 aa9.15□□□□□ -0.94
PTPN21-205ENST00000554270 A0A1B0GUT8 65 aa9.15□□□□□ -0.94
PTPN21-205ENST00000554270 TIMM23O14925 209 aa9.15□□□□□ -0.94
PTPN21-205ENST00000554270 LGALS7P47929 136 aa9.15□□□□□ -0.94
PTPN21-205ENST00000554270 RPL11P62913 178 aaKnown RBP9.15□□□□□ -0.94
PTPN21-205ENST00000554270 DEFB104AQ8WTQ1 72 aa9.15□□□□□ -0.94
PTPN21-205ENST00000554270 SLC25A39Q9BZJ4 359 aaPredicted RBP9.15□□□□□ -0.94
PTPN21-205ENST00000554270 CCL21O00585 134 aa9.15□□□□□ -0.95
PTPN21-205ENST00000554270 CCL25O15444 150 aa9.15□□□□□ -0.95
PTPN21-205ENST00000554270 OR2J3O76001 311 aa9.15□□□□□ -0.95
PTPN21-205ENST00000554270 MEF2CQ06413 473 aaPredicted RBP9.15□□□□□ -0.95
PTPN21-205ENST00000554270 ZNF833PQ6ZTB9 187 aa9.15□□□□□ -0.95
PTPN21-205ENST00000554270 SCNM1Q9BWG6 230 aa9.15□□□□□ -0.95
PTPN21-205ENST00000554270 USP9YO00507 2555 aaPredicted RBP9.14□□□□□ -0.95
PTPN21-205ENST00000554270 IGHV2-26A0A0B4J1V2 119 aa9.14□□□□□ -0.95
PTPN21-205ENST00000554270 SORL1Q92673 2214 aa9.14□□□□□ -0.95
PTPN21-205ENST00000554270 IGKV2-40A0A087WW87 121 aaPredicted RBP9.14□□□□□ -0.95
PTPN21-205ENST00000554270 OR2T8A6NH00 312 aa9.14□□□□□ -0.95
PTPN21-205ENST00000554270 SYS1-DBNDD2H3BUS1 97 aa9.14□□□□□ -0.95
PTPN21-205ENST00000554270 NDUFS8O00217 210 aa9.14□□□□□ -0.95
PTPN21-205ENST00000554270 IGKV2D-40P01614 121 aaPredicted RBP9.14□□□□□ -0.95
PTPN21-205ENST00000554270 PRSS1P07477 247 aa9.14□□□□□ -0.95
PTPN21-205ENST00000554270 CEACAM8P31997 349 aaPredicted RBP9.14□□□□□ -0.95
PTPN21-205ENST00000554270 FBLN7Q53RD9 439 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms