RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 CHRDL1Q9BU40 450 aa11.56□□□□□ -0.56
ACTN1-211ENST00000553882 IGKV1-17P01599 117 aa11.56□□□□□ -0.56
ACTN1-211ENST00000553882 CA7P43166 264 aa11.56□□□□□ -0.56
ACTN1-211ENST00000553882 CDSNQ15517 529 aa11.56□□□□□ -0.56
ACTN1-211ENST00000553882 CLEC2AQ6UVW9 174 aa11.56□□□□□ -0.56
ACTN1-211ENST00000553882 GOLT1AQ6ZVE7 132 aa11.56□□□□□ -0.56
ACTN1-211ENST00000553882 FMC1Q96HJ9 113 aa11.56□□□□□ -0.56
ACTN1-211ENST00000553882 KLRD1Q13241 179 aa11.55□□□□□ -0.56
ACTN1-211ENST00000553882 PRNTQ86SH4 94 aa11.55□□□□□ -0.56
ACTN1-211ENST00000553882 DAZAP1Q96EP5 407 aaKnown RBP11.55□□□□□ -0.56
ACTN1-211ENST00000553882 C17orf77Q96MU5 243 aa11.55□□□□□ -0.56
ACTN1-211ENST00000553882 ZFHX3Q15911 3703 aa11.55□□□□□ -0.56
ACTN1-211ENST00000553882 A0A1B0GXF2 115 aa11.55□□□□□ -0.56
ACTN1-211ENST00000553882 M0R2Z0 102 aa11.55□□□□□ -0.56
ACTN1-211ENST00000553882 PLP1P60201 277 aa11.55□□□□□ -0.56
ACTN1-211ENST00000553882 PMCHL1Q16048 86 aa11.55□□□□□ -0.56
ACTN1-211ENST00000553882 FBLN7Q53RD9 439 aa11.55□□□□□ -0.56
ACTN1-211ENST00000553882 OR8B3Q8NGG8 313 aa11.55□□□□□ -0.56
ACTN1-211ENST00000553882 OR8B2Q96RD0 313 aa11.55□□□□□ -0.56
ACTN1-211ENST00000553882 MRPL27Q9P0M9 148 aaKnown RBP11.55□□□□□ -0.56
ACTN1-211ENST00000553882 HBBP68871 147 aa11.54□□□□□ -0.56
ACTN1-211ENST00000553882 PRSS22Q9GZN4 317 aa11.54□□□□□ -0.56
ACTN1-211ENST00000553882 SH2D7A6NKC9 451 aaPredicted RBP11.54□□□□□ -0.56
ACTN1-211ENST00000553882 A8MWL6 223 aa11.54□□□□□ -0.56
ACTN1-211ENST00000553882 COL8A1P27658 744 aa11.54□□□□□ -0.56
ACTN1-211ENST00000553882 C19orf71A6NCJ1 209 aa11.53□□□□□ -0.56
ACTN1-211ENST00000553882 LY6LH3BQJ8 138 aa11.53□□□□□ -0.56
ACTN1-211ENST00000553882 K7EIM0 57 aa11.53□□□□□ -0.56
ACTN1-211ENST00000553882 LIPFP07098 398 aa11.53□□□□□ -0.56
ACTN1-211ENST00000553882 CTRLP40313 264 aa11.53□□□□□ -0.56
ACTN1-211ENST00000553882 HES1Q14469 280 aa11.53□□□□□ -0.56
ACTN1-211ENST00000553882 ATP5L2Q7Z4Y8 100 aa11.53□□□□□ -0.56
ACTN1-211ENST00000553882 Q86TA4 180 aa11.53□□□□□ -0.56
ACTN1-211ENST00000553882 CCL21O00585 134 aa11.53□□□□□ -0.56
ACTN1-211ENST00000553882 Q56UQ5 140 aa11.53□□□□□ -0.56
ACTN1-211ENST00000553882 SMIM12Q96EX1 92 aa11.53□□□□□ -0.56
ACTN1-211ENST00000553882 COL12A1Q99715 3063 aa11.52□□□□□ -0.57
ACTN1-211ENST00000553882 FAM181BA6NEQ2 426 aa11.52□□□□□ -0.57
ACTN1-211ENST00000553882 OR2J3O76001 311 aa11.52□□□□□ -0.57
ACTN1-211ENST00000553882 ZNF25P17030 456 aaPredicted RBP11.52□□□□□ -0.57
ACTN1-211ENST00000553882 HTR1DP28221 377 aa11.52□□□□□ -0.57
ACTN1-211ENST00000553882 EBLN2Q6P2I7 272 aa11.52□□□□□ -0.57
ACTN1-211ENST00000553882 OTORQ9NRC9 128 aa11.52□□□□□ -0.57
ACTN1-211ENST00000553882 SPTBN4Q9H254 2564 aa11.52□□□□□ -0.57
ACTN1-211ENST00000553882 IGLV2-11P01706 119 aa11.52□□□□□ -0.57
ACTN1-211ENST00000553882 IL4P05112 153 aa11.52□□□□□ -0.57
ACTN1-211ENST00000553882 RPLP1P05386 114 aaKnown RBP11.52□□□□□ -0.57
ACTN1-211ENST00000553882 BCL6BQ8N143 479 aaPredicted RBP11.52□□□□□ -0.57
ACTN1-211ENST00000553882 CLEC5AQ9NY25 188 aa11.52□□□□□ -0.57
ACTN1-211ENST00000553882 KLF5Q13887 457 aaPredicted RBP11.51□□□□□ -0.57
ACTN1-211ENST00000553882 URB1-AS1Q96HZ7 61 aa11.51□□□□□ -0.57
ACTN1-211ENST00000553882 M0QZK8 103 aa11.51□□□□□ -0.57
ACTN1-211ENST00000553882 NBR2O15453 112 aa11.51□□□□□ -0.57
ACTN1-211ENST00000553882 TFPI2P48307 235 aa11.51□□□□□ -0.57
ACTN1-211ENST00000553882 RBPMS2Q6ZRY4 209 aaKnown RBP11.51□□□□□ -0.57
ACTN1-211ENST00000553882 TXN2Q99757 166 aa11.51□□□□□ -0.57
ACTN1-211ENST00000553882 DPM3Q9P2X0 92 aa11.51□□□□□ -0.57
ACTN1-211ENST00000553882 CHD8Q9HCK8 2581 aa11.51□□□□□ -0.57
ACTN1-211ENST00000553882 CELSR1Q9NYQ6 3014 aa11.5□□□□□ -0.57
ACTN1-211ENST00000553882 PAX2Q02962 417 aa11.5□□□□□ -0.57
ACTN1-211ENST00000553882 NCOR2Q9Y618 2525 aa11.5□□□□□ -0.57
ACTN1-211ENST00000553882 IGLC2P0DOY2 106 aa11.5□□□□□ -0.57
ACTN1-211ENST00000553882 IGLC3P0DOY3 106 aa11.5□□□□□ -0.57
ACTN1-211ENST00000553882 Q6ZN92 141 aa11.5□□□□□ -0.57
ACTN1-211ENST00000553882 BPIFA4PQ86YQ2 179 aa11.5□□□□□ -0.57
ACTN1-211ENST00000553882 TMEM14CQ9P0S9 112 aa11.5□□□□□ -0.57
ACTN1-211ENST00000553882 ZNF492Q9P255 531 aa11.5□□□□□ -0.57
ACTN1-211ENST00000553882 VPS13CQ709C8 3753 aa11.49□□□□□ -0.57
ACTN1-211ENST00000553882 TRBV19A0A075B6N1 114 aa11.49□□□□□ -0.57
ACTN1-211ENST00000553882 M0R3E3 92 aa11.49□□□□□ -0.57
ACTN1-211ENST00000553882 FCGR2BP31994 310 aaPredicted RBP11.49□□□□□ -0.57
ACTN1-211ENST00000553882 CT83Q5H943 113 aa11.49□□□□□ -0.57
ACTN1-211ENST00000553882 ZNF491Q8N8L2 437 aa11.49□□□□□ -0.57
ACTN1-211ENST00000553882 RNF125Q96EQ8 232 aa11.49□□□□□ -0.57
ACTN1-211ENST00000553882 ZC2HC1AQ96GY0 325 aa11.49□□□□□ -0.57
ACTN1-211ENST00000553882 SHANK2-AS3Q9BTD1 123 aa11.49□□□□□ -0.57
ACTN1-211ENST00000553882 CHEK1O14757 476 aa11.49□□□□□ -0.57
ACTN1-211ENST00000553882 ZNF138P52744 262 aa11.49□□□□□ -0.57
ACTN1-211ENST00000553882 SPATA12Q7Z6I5 190 aa11.49□□□□□ -0.57
ACTN1-211ENST00000553882 LY6G5BQ8NDX9 201 aa11.49□□□□□ -0.57
ACTN1-211ENST00000553882 OR4F17Q8NGA8 305 aa11.49□□□□□ -0.57
ACTN1-211ENST00000553882 CFHR4Q92496 578 aa11.49□□□□□ -0.57
ACTN1-211ENST00000553882 IGHV3-23P01764 117 aa11.48□□□□□ -0.57
ACTN1-211ENST00000553882 RNF5Q99942 180 aa11.48□□□□□ -0.57
ACTN1-211ENST00000553882 TPPP3Q9BW30 176 aa11.48□□□□□ -0.57
ACTN1-211ENST00000553882 UQCR10Q9UDW1 63 aa11.48□□□□□ -0.57
ACTN1-211ENST00000553882 C2orf70A6NJV1 201 aa11.48□□□□□ -0.57
ACTN1-211ENST00000553882 ZNF785A8K8V0 405 aa11.48□□□□□ -0.57
ACTN1-211ENST00000553882 HLA-DRB1P01911 266 aa11.48□□□□□ -0.57
ACTN1-211ENST00000553882 RAB1BQ9H0U4 201 aa11.48□□□□□ -0.57
ACTN1-211ENST00000553882 LPAR2Q9HBW0 351 aa11.48□□□□□ -0.57
ACTN1-211ENST00000553882 NCBP2LA6PVI3 153 aaKnown RBP11.47□□□□□ -0.57
ACTN1-211ENST00000553882 H3BRN7 92 aa11.47□□□□□ -0.57
ACTN1-211ENST00000553882 GNG7O60262 68 aa11.47□□□□□ -0.57
ACTN1-211ENST00000553882 SIGLEC15Q6ZMC9 328 aa11.47□□□□□ -0.57
ACTN1-211ENST00000553882 LINC00173Q6ZV60 143 aa11.47□□□□□ -0.57
ACTN1-211ENST00000553882 CBY1Q9Y3M2 126 aa11.47□□□□□ -0.57
ACTN1-211ENST00000553882 NPIPB6E9PJ23 425 aa11.47□□□□□ -0.57
ACTN1-211ENST00000553882 HNRNPA3P51991 378 aaKnown RBP11.47□□□□□ -0.57
ACTN1-211ENST00000553882 COTL1Q14019 142 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms