RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 STHQ8IWL8 128 aa16.83■□□□□ 0.28
TDP1-206ENST00000553569 GPR82Q96P67 336 aa16.83■□□□□ 0.28
TDP1-206ENST00000553569 NPCDR1Q9BY65 106 aa16.83■□□□□ 0.28
TDP1-206ENST00000553569 PXMP4Q9Y6I8 212 aa16.83■□□□□ 0.28
TDP1-206ENST00000553569 MPDU1O75352 247 aa16.82■□□□□ 0.28
TDP1-206ENST00000553569 LYL1P12980 280 aa16.82■□□□□ 0.28
TDP1-206ENST00000553569 ATF4P18848 351 aaPredicted RBP16.82■□□□□ 0.28
TDP1-206ENST00000553569 RPL29P47914 159 aaKnown RBP16.82■□□□□ 0.28
TDP1-206ENST00000553569 C10orf113Q5VZT2 155 aa16.82■□□□□ 0.28
TDP1-206ENST00000553569 LINC00052Q96N35 136 aa16.82■□□□□ 0.28
TDP1-206ENST00000553569 ATP5SQ99766 215 aa16.82■□□□□ 0.28
TDP1-206ENST00000553569 SLC39A9Q9NUM3 307 aa16.82■□□□□ 0.28
TDP1-206ENST00000553569 AGRNO00468 2067 aa16.81■□□□□ 0.28
TDP1-206ENST00000553569 KIR2DL5BA0A0G2JN68 375 aa16.81■□□□□ 0.28
TDP1-206ENST00000553569 KIR2DL5BA0A0G2JPC4 375 aa16.81■□□□□ 0.28
TDP1-206ENST00000553569 SOCS3O14543 225 aa16.81■□□□□ 0.28
TDP1-206ENST00000553569 RPL7P18124 248 aaKnown RBP16.81■□□□□ 0.28
TDP1-206ENST00000553569 ID1P41134 155 aa16.81■□□□□ 0.28
TDP1-206ENST00000553569 PSMB3P49720 205 aa16.81■□□□□ 0.28
TDP1-206ENST00000553569 ACTL10Q5JWF8 245 aa16.81■□□□□ 0.28
TDP1-206ENST00000553569 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.81■□□□□ 0.28
TDP1-206ENST00000553569 KIR2DL5AQ8N109 375 aa16.81■□□□□ 0.28
TDP1-206ENST00000553569 KIR2DL5BQ8NHK3 375 aa16.81■□□□□ 0.28
TDP1-206ENST00000553569 TMEM37Q8WXS4 190 aa16.81■□□□□ 0.28
TDP1-206ENST00000553569 WWC2-AS2Q96NR7 200 aa16.81■□□□□ 0.28
TDP1-206ENST00000553569 SEPSECSQ9HD40 501 aaKnown RBP16.81■□□□□ 0.28
TDP1-206ENST00000553569 ELOA3CA0A087WX78 387 aaPredicted RBP16.8■□□□□ 0.28
TDP1-206ENST00000553569 MEOX2P50222 304 aa16.8■□□□□ 0.28
TDP1-206ENST00000553569 FGL1Q08830 312 aa16.8■□□□□ 0.28
TDP1-206ENST00000553569 DEFB135Q30KP9 77 aa16.8■□□□□ 0.28
TDP1-206ENST00000553569 OR1L4Q8NGR5 311 aa16.8■□□□□ 0.28
TDP1-206ENST00000553569 C16orf92Q96LL3 132 aa16.8■□□□□ 0.28
TDP1-206ENST00000553569 WDR61Q9GZS3 305 aaKnown RBP16.8■□□□□ 0.28
TDP1-206ENST00000553569 DNAJC4Q9NNZ3 241 aa16.8■□□□□ 0.28
TDP1-206ENST00000553569 UBE2CO00762 179 aa16.79■□□□□ 0.28
TDP1-206ENST00000553569 Q5BKY6 102 aa16.79■□□□□ 0.28
TDP1-206ENST00000553569 MORN5Q5VZ52 161 aa16.79■□□□□ 0.28
TDP1-206ENST00000553569 CHAC2Q8WUX2 184 aa16.79■□□□□ 0.28
TDP1-206ENST00000553569 ASB13Q8WXK3 278 aa16.79■□□□□ 0.28
TDP1-206ENST00000553569 C17orf77Q96MU5 243 aa16.79■□□□□ 0.28
TDP1-206ENST00000553569 PFDN5Q99471 154 aa16.79■□□□□ 0.28
TDP1-206ENST00000553569 CSTL1Q9H114 145 aa16.79■□□□□ 0.28
TDP1-206ENST00000553569 RNF24Q9Y225 148 aa16.79■□□□□ 0.28
TDP1-206ENST00000553569 TENM3Q9P273 2699 aa16.79■□□□□ 0.28
TDP1-206ENST00000553569 ISLRO14498 428 aa16.78■□□□□ 0.28
TDP1-206ENST00000553569 DEFB1P60022 68 aa16.78■□□□□ 0.28
TDP1-206ENST00000553569 SAMD13Q5VXD3 122 aa16.78■□□□□ 0.28
TDP1-206ENST00000553569 TRPT1Q86TN4 253 aaKnown RBP16.78■□□□□ 0.28
TDP1-206ENST00000553569 ZNF709Q8N972 641 aa16.78■□□□□ 0.28
TDP1-206ENST00000553569 CA1P00915 261 aaPredicted RBP16.77■□□□□ 0.28
TDP1-206ENST00000553569 OVOL2Q9BRP0 275 aa16.77■□□□□ 0.28
TDP1-206ENST00000553569 IFNA5P01569 189 aa16.76■□□□□ 0.27
TDP1-206ENST00000553569 GCSAMLQ5JQS6 135 aa16.76■□□□□ 0.27
TDP1-206ENST00000553569 IGFL4Q6B9Z1 124 aa16.76■□□□□ 0.27
TDP1-206ENST00000553569 Q6ZWC4 215 aa16.76■□□□□ 0.27
TDP1-206ENST00000553569 C20orf173Q96LM9 149 aa16.76■□□□□ 0.27
TDP1-206ENST00000553569 WFDC1Q9HC57 220 aa16.76■□□□□ 0.27
TDP1-206ENST00000553569 KCNIP2Q9NS61 270 aa16.76■□□□□ 0.27
TDP1-206ENST00000553569 TRAV5A0A0B4J249 113 aa16.75■□□□□ 0.27
TDP1-206ENST00000553569 SPRY2O43597 315 aa16.75■□□□□ 0.27
TDP1-206ENST00000553569 SNRPCP09234 159 aaKnown RBP16.75■□□□□ 0.27
TDP1-206ENST00000553569 BPIFA4PQ86YQ2 179 aa16.75■□□□□ 0.27
TDP1-206ENST00000553569 OR2T35Q8NGX2 323 aa16.75■□□□□ 0.27
TDP1-206ENST00000553569 SCGB1C1Q8TD33 95 aa16.75■□□□□ 0.27
TDP1-206ENST00000553569 FXYD6-FXYD2A0A087WZ82 144 aa16.74■□□□□ 0.27
TDP1-206ENST00000553569 A0A087X0K7 114 aa16.74■□□□□ 0.27
TDP1-206ENST00000553569 C17orf112F2Z3M2 114 aa16.74■□□□□ 0.27
TDP1-206ENST00000553569 MRPS12O15235 138 aaKnown RBP16.74■□□□□ 0.27
TDP1-206ENST00000553569 GDF5OSQ5U4N7 250 aa16.74■□□□□ 0.27
TDP1-206ENST00000553569 LRRC20Q8TCA0 184 aa16.74■□□□□ 0.27
TDP1-206ENST00000553569 GATAD1Q8WUU5 269 aa16.74■□□□□ 0.27
TDP1-206ENST00000553569 TRAV8-2A0A0B4J237 113 aa16.73■□□□□ 0.27
TDP1-206ENST00000553569 HLA-DRB4P13762 266 aa16.73■□□□□ 0.27
TDP1-206ENST00000553569 RNF182Q8N6D2 247 aa16.73■□□□□ 0.27
TDP1-206ENST00000553569 AQP10Q96PS8 301 aa16.73■□□□□ 0.27
TDP1-206ENST00000553569 RPRMQ9NS64 109 aa16.73■□□□□ 0.27
TDP1-206ENST00000553569 TP53TG1Q9Y2A0 90 aa16.73■□□□□ 0.27
TDP1-206ENST00000553569 HLA-DRB4X5D2U9 266 aa16.73■□□□□ 0.27
TDP1-206ENST00000553569 STAB2Q8WWQ8 2551 aa16.73■□□□□ 0.27
TDP1-206ENST00000553569 F6UB75 175 aa16.72■□□□□ 0.27
TDP1-206ENST00000553569 H3BMM0 161 aa16.72■□□□□ 0.27
TDP1-206ENST00000553569 H3BTX0 84 aa16.72■□□□□ 0.27
TDP1-206ENST00000553569 IGKV3-20P01619 116 aa16.72■□□□□ 0.27
TDP1-206ENST00000553569 SPP1P10451 314 aa16.72■□□□□ 0.27
TDP1-206ENST00000553569 C4BPBP20851 252 aa16.72■□□□□ 0.27
TDP1-206ENST00000553569 FOXI2Q6ZQN5 318 aa16.72■□□□□ 0.27
TDP1-206ENST00000553569 RNF183Q96D59 192 aa16.72■□□□□ 0.27
TDP1-206ENST00000553569 SAV1Q9H4B6 383 aaPredicted RBP16.72■□□□□ 0.27
TDP1-206ENST00000553569 NBEAL2Q6ZNJ1 2754 aa16.72■□□□□ 0.27
TDP1-206ENST00000553569 FAM78BQ5VT40 261 aa16.71■□□□□ 0.27
TDP1-206ENST00000553569 MORN3Q6PF18 240 aaPredicted RBP16.71■□□□□ 0.27
TDP1-206ENST00000553569 EDA2RQ9HAV5 297 aa16.71■□□□□ 0.27
TDP1-206ENST00000553569 HLA-DMBP28068 263 aa16.7■□□□□ 0.26
TDP1-206ENST00000553569 FFAR4Q5NUL3 377 aa16.7■□□□□ 0.26
TDP1-206ENST00000553569 SPATA31B1PQ5VZV4 182 aa16.7■□□□□ 0.26
TDP1-206ENST00000553569 EBLN2Q6P2I7 272 aa16.7■□□□□ 0.26
TDP1-206ENST00000553569 LCN15Q6UWW0 184 aa16.7■□□□□ 0.26
TDP1-206ENST00000553569 INO80EQ8NBZ0 244 aaPredicted RBP16.7■□□□□ 0.26
TDP1-206ENST00000553569 PARD6GQ9BYG4 376 aaPredicted RBP16.7■□□□□ 0.26
TDP1-206ENST00000553569 G3V3Q6 166 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms