RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 NPIPB3Q92617 1050 aa5.02□□□□□ -1.61
ATXN3-219ENST00000553488 UPK3BQ9BT76 320 aa5.02□□□□□ -1.61
ATXN3-219ENST00000553488 MAGT1Q9H0U3 335 aa5.02□□□□□ -1.61
ATXN3-219ENST00000553488 Q9H8V8 135 aa5.02□□□□□ -1.61
ATXN3-219ENST00000553488 DOK5Q9P104 306 aa5.02□□□□□ -1.61
ATXN3-219ENST00000553488 C3orf85A0A1B0GTC6 90 aa5.01□□□□□ -1.61
ATXN3-219ENST00000553488 A0A1W2PPQ1 181 aa5.01□□□□□ -1.61
ATXN3-219ENST00000553488 M0R2Z0 102 aa5.01□□□□□ -1.61
ATXN3-219ENST00000553488 ATG12O94817 140 aa5.01□□□□□ -1.61
ATXN3-219ENST00000553488 INSP01308 110 aa5.01□□□□□ -1.61
ATXN3-219ENST00000553488 ATP5G1P05496 136 aa5.01□□□□□ -1.61
ATXN3-219ENST00000553488 AZU1P20160 251 aa5.01□□□□□ -1.61
ATXN3-219ENST00000553488 FUSP35637 526 aaKnown RBP eCLIP5.01□□□□□ -1.61
ATXN3-219ENST00000553488 ID1P41134 155 aa5.01□□□□□ -1.61
ATXN3-219ENST00000553488 ATP5G3P48201 142 aa5.01□□□□□ -1.61
ATXN3-219ENST00000553488 FCN2Q15485 313 aa5.01□□□□□ -1.61
ATXN3-219ENST00000553488 TRIM16LQ309B1 348 aa5.01□□□□□ -1.61
ATXN3-219ENST00000553488 SP6Q3SY56 376 aa5.01□□□□□ -1.61
ATXN3-219ENST00000553488 NMSQ5H8A3 153 aa5.01□□□□□ -1.61
ATXN3-219ENST00000553488 C1orf194Q5T5A4 169 aa5.01□□□□□ -1.61
ATXN3-219ENST00000553488 EBLN2Q6P2I7 272 aa5.01□□□□□ -1.61
ATXN3-219ENST00000553488 BAP18Q8IXM2 172 aa5.01□□□□□ -1.61
ATXN3-219ENST00000553488 OR11H7Q8NGC8 314 aa5.01□□□□□ -1.61
ATXN3-219ENST00000553488 OR4C16Q8NGL9 310 aa5.01□□□□□ -1.61
ATXN3-219ENST00000553488 ACY3Q96HD9 319 aa5.01□□□□□ -1.61
ATXN3-219ENST00000553488 C18orf15Q96N68 181 aa5.01□□□□□ -1.61
ATXN3-219ENST00000553488 TMEM208Q9BTX3 173 aa5.01□□□□□ -1.61
ATXN3-219ENST00000553488 CBY3A6NI87 242 aa5□□□□□ -1.61
ATXN3-219ENST00000553488 ANKRD65E5RJM6 399 aa5□□□□□ -1.61
ATXN3-219ENST00000553488 PGAM2P15259 253 aa5□□□□□ -1.61
ATXN3-219ENST00000553488 CNN1P51911 297 aaKnown RBP5□□□□□ -1.61
ATXN3-219ENST00000553488 LINC00315P59091 139 aa5□□□□□ -1.61
ATXN3-219ENST00000553488 ZNF90Q03938 601 aa5□□□□□ -1.61
ATXN3-219ENST00000553488 SPINK13Q1W4C9 94 aa5□□□□□ -1.61
ATXN3-219ENST00000553488 DGAT2L7PQ6IED9 249 aa5□□□□□ -1.61
ATXN3-219ENST00000553488 ETFRF1Q6IPR1 90 aa5□□□□□ -1.61
ATXN3-219ENST00000553488 CROCCP3Q8IVE0 287 aa5□□□□□ -1.61
ATXN3-219ENST00000553488 FAM219AQ8IW50 185 aa5□□□□□ -1.61
ATXN3-219ENST00000553488 RRNAD1Q96FB5 475 aaKnown RBP5□□□□□ -1.61
ATXN3-219ENST00000553488 ABHD1Q96SE0 405 aa5□□□□□ -1.61
ATXN3-219ENST00000553488 PBDC1Q9BVG4 233 aa5□□□□□ -1.61
ATXN3-219ENST00000553488 RPRMQ9NS64 109 aa5□□□□□ -1.61
ATXN3-219ENST00000553488 ZNF586Q9NXT0 402 aa5□□□□□ -1.61
ATXN3-219ENST00000553488 CACNG5Q9UF02 275 aa5□□□□□ -1.61
ATXN3-219ENST00000553488 MRPS16Q9Y3D3 137 aaKnown RBP5□□□□□ -1.61
ATXN3-219ENST00000553488 CDS2O95674 445 aa4.99□□□□□ -1.61
ATXN3-219ENST00000553488 KRTAP10-1P60331 282 aa4.99□□□□□ -1.61
ATXN3-219ENST00000553488 DLK1P80370 383 aa4.99□□□□□ -1.61
ATXN3-219ENST00000553488 CLINT1Q14677 625 aa4.99□□□□□ -1.61
ATXN3-219ENST00000553488 SAMD13Q5VXD3 122 aa4.99□□□□□ -1.61
ATXN3-219ENST00000553488 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.99□□□□□ -1.61
ATXN3-219ENST00000553488 ARRDC1Q8N5I2 433 aa4.99□□□□□ -1.61
ATXN3-219ENST00000553488 LINC00612Q8N6U2 182 aa4.99□□□□□ -1.61
ATXN3-219ENST00000553488 OR13C8Q8NGS7 320 aa4.99□□□□□ -1.61
ATXN3-219ENST00000553488 RNASE11Q8TAA1 199 aaKnown RBP4.99□□□□□ -1.61
ATXN3-219ENST00000553488 FRZBQ92765 325 aa4.99□□□□□ -1.61
ATXN3-219ENST00000553488 UHRF2Q96PU4 802 aa4.99□□□□□ -1.61
ATXN3-219ENST00000553488 TMEM222Q9H0R3 208 aa4.99□□□□□ -1.61
ATXN3-219ENST00000553488 SLC25A32Q9H2D1 315 aa4.99□□□□□ -1.61
ATXN3-219ENST00000553488 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.99□□□□□ -1.61
ATXN3-219ENST00000553488 RAB26Q9ULW5 256 aa4.99□□□□□ -1.61
ATXN3-219ENST00000553488 TRAV12-2A0A075B6T6 113 aa4.98□□□□□ -1.61
ATXN3-219ENST00000553488 IGKV1OR2-108A0A075B7D4 117 aa4.98□□□□□ -1.61
ATXN3-219ENST00000553488 TRAV26-1A0A087WT03 109 aa4.98□□□□□ -1.61
ATXN3-219ENST00000553488 TRAV8-2A0A0B4J237 113 aa4.98□□□□□ -1.61
ATXN3-219ENST00000553488 CEBPZOSA8MTT3 80 aa4.98□□□□□ -1.61
ATXN3-219ENST00000553488 H0YIZ8 118 aa4.98□□□□□ -1.61
ATXN3-219ENST00000553488 BOLA2-SMG1P6H3BVE0 249 aa4.98□□□□□ -1.61
ATXN3-219ENST00000553488 B3GALNT1O75752 331 aa4.98□□□□□ -1.61
ATXN3-219ENST00000553488 APOA1P02647 267 aa4.98□□□□□ -1.61
ATXN3-219ENST00000553488 CD3DP04234 171 aa4.98□□□□□ -1.61
ATXN3-219ENST00000553488 OR5AC1P0C628 307 aa4.98□□□□□ -1.61
ATXN3-219ENST00000553488 MEOX2P50222 304 aa4.98□□□□□ -1.61
ATXN3-219ENST00000553488 LYZP61626 148 aa4.98□□□□□ -1.61
ATXN3-219ENST00000553488 B2MP61769 119 aa4.98□□□□□ -1.61
ATXN3-219ENST00000553488 RPP30P78346 268 aaKnown RBP4.98□□□□□ -1.61
ATXN3-219ENST00000553488 GAMTQ14353 236 aa4.98□□□□□ -1.61
ATXN3-219ENST00000553488 MEF2DQ14814 521 aa4.98□□□□□ -1.61
ATXN3-219ENST00000553488 ESRGQ1W209 222 aa4.98□□□□□ -1.61
ATXN3-219ENST00000553488 SNX29P2Q8IUI4 249 aa4.98□□□□□ -1.61
ATXN3-219ENST00000553488 SELENOHQ8IZQ5 122 aaKnown RBP4.98□□□□□ -1.61
ATXN3-219ENST00000553488 CCDC71LQ8N9Z2 235 aa4.98□□□□□ -1.61
ATXN3-219ENST00000553488 OR4D10Q8NGI6 311 aa4.98□□□□□ -1.61
ATXN3-219ENST00000553488 RNASE8Q8TDE3 154 aaKnown RBP4.98□□□□□ -1.61
ATXN3-219ENST00000553488 RXFP4Q8TDU9 374 aa4.98□□□□□ -1.61
ATXN3-219ENST00000553488 GLYATL2Q8WU03 294 aa4.98□□□□□ -1.61
ATXN3-219ENST00000553488 RBPMSQ93062 196 aaKnown RBP4.98□□□□□ -1.61
ATXN3-219ENST00000553488 C16orf74Q96GX8 76 aa4.98□□□□□ -1.61
ATXN3-219ENST00000553488 KRTAP9-8Q9BYQ0 159 aa4.98□□□□□ -1.61
ATXN3-219ENST00000553488 VCX3BQ9H321 246 aa4.98□□□□□ -1.61
ATXN3-219ENST00000553488 COPZ2Q9P299 210 aa4.98□□□□□ -1.61
ATXN3-219ENST00000553488 ZFP92A6NM28 416 aa4.97□□□□□ -1.61
ATXN3-219ENST00000553488 ZNF701M0R085 212 aaPredicted RBP4.97□□□□□ -1.61
ATXN3-219ENST00000553488 KLF9Q13886 244 aaPredicted RBP4.97□□□□□ -1.61
ATXN3-219ENST00000553488 NEDD8Q15843 81 aa4.97□□□□□ -1.61
ATXN3-219ENST00000553488 RNASE10Q5GAN6 216 aaKnown RBP4.97□□□□□ -1.61
ATXN3-219ENST00000553488 GPR141Q7Z602 305 aa4.97□□□□□ -1.61
ATXN3-219ENST00000553488 OR8I2Q8N0Y5 310 aa4.97□□□□□ -1.61
ATXN3-219ENST00000553488 TMEM256Q8N2U0 113 aa4.97□□□□□ -1.61
ATXN3-219ENST00000553488 MARCH1Q8TCQ1 289 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms