RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 TMED3Q9Y3Q3 217 aa8.13□□□□□ -1.11
NEK3-204ENST00000552973 FAT2Q9NYQ8 4349 aa8.12□□□□□ -1.11
NEK3-204ENST00000552973 TRAV8-2A0A0B4J237 113 aa8.12□□□□□ -1.11
NEK3-204ENST00000552973 TEX48A0A1B0GUV7 120 aa8.12□□□□□ -1.11
NEK3-204ENST00000552973 SMCO3A2RU48 225 aa8.12□□□□□ -1.11
NEK3-204ENST00000552973 CFDP00746 253 aaPredicted RBP8.12□□□□□ -1.11
NEK3-204ENST00000552973 MED14OSP0DP75 135 aa8.12□□□□□ -1.11
NEK3-204ENST00000552973 SLC25A6P12236 298 aa8.12□□□□□ -1.11
NEK3-204ENST00000552973 MEOX2P50222 304 aa8.12□□□□□ -1.11
NEK3-204ENST00000552973 OXA1LQ15070 435 aa8.12□□□□□ -1.11
NEK3-204ENST00000552973 FCN2Q15485 313 aa8.12□□□□□ -1.11
NEK3-204ENST00000552973 Q6ZR54 194 aa8.12□□□□□ -1.11
NEK3-204ENST00000552973 ACOT7LQ6ZUV0 252 aa8.12□□□□□ -1.11
NEK3-204ENST00000552973 FAM210BQ96KR6 192 aa8.12□□□□□ -1.11
NEK3-204ENST00000552973 DYNC1H1Q14204 4646 aaKnown RBP8.12□□□□□ -1.11
NEK3-204ENST00000552973 HECTD4Q9Y4D8 3996 aa8.11□□□□□ -1.11
NEK3-204ENST00000552973 TRAV12-2A0A075B6T6 113 aa8.11□□□□□ -1.11
NEK3-204ENST00000552973 PIGBOS1A0A0B4J2F0 54 aa8.11□□□□□ -1.11
NEK3-204ENST00000552973 CRXO43186 299 aaPredicted RBP8.11□□□□□ -1.11
NEK3-204ENST00000552973 ADAP1O75689 374 aa8.11□□□□□ -1.11
NEK3-204ENST00000552973 DEFB130BP0DP73 79 aa8.11□□□□□ -1.11
NEK3-204ENST00000552973 DEFB130AP0DP74 79 aa8.11□□□□□ -1.11
NEK3-204ENST00000552973 AP3S2P59780 193 aa8.11□□□□□ -1.11
NEK3-204ENST00000552973 POLR2GP62487 172 aaKnown RBP eCLIP8.11□□□□□ -1.11
NEK3-204ENST00000552973 SAMD13Q5VXD3 122 aa8.11□□□□□ -1.11
NEK3-204ENST00000552973 OR11H7Q8NGC8 314 aa8.11□□□□□ -1.11
NEK3-204ENST00000552973 SLC25A39Q9BZJ4 359 aaPredicted RBP8.11□□□□□ -1.11
NEK3-204ENST00000552973 SLC45A2Q9UMX9 530 aa8.11□□□□□ -1.11
NEK3-204ENST00000552973 STRAPQ9Y3F4 350 aaKnown RBP8.11□□□□□ -1.11
NEK3-204ENST00000552973 V9GYH0 126 aa8.11□□□□□ -1.11
NEK3-204ENST00000552973 DNAH17Q9UFH2 4485 aa8.11□□□□□ -1.11
NEK3-204ENST00000552973 A8MTW9 85 aa8.1□□□□□ -1.11
NEK3-204ENST00000552973 CCNKO75909 580 aa8.1□□□□□ -1.11
NEK3-204ENST00000552973 DUSP14O95147 198 aaKnown RBP8.1□□□□□ -1.11
NEK3-204ENST00000552973 IL5P05113 134 aa8.1□□□□□ -1.11
NEK3-204ENST00000552973 AZU1P20160 251 aa8.1□□□□□ -1.11
NEK3-204ENST00000552973 RNF212Q495C1 297 aa8.1□□□□□ -1.11
NEK3-204ENST00000552973 CYP2G1PQ6ZSU1 146 aa8.1□□□□□ -1.11
NEK3-204ENST00000552973 ZNF575Q86XF7 245 aa8.1□□□□□ -1.11
NEK3-204ENST00000552973 BAP18Q8IXM2 172 aa8.1□□□□□ -1.11
NEK3-204ENST00000552973 ZNF738Q8NE65 137 aa8.1□□□□□ -1.11
NEK3-204ENST00000552973 OR4D5Q8NGN0 318 aa8.1□□□□□ -1.11
NEK3-204ENST00000552973 SLC25A21Q9BQT8 299 aaPredicted RBP8.1□□□□□ -1.11
NEK3-204ENST00000552973 PSENENQ9NZ42 101 aa8.1□□□□□ -1.11
NEK3-204ENST00000552973 DNAH11Q96DT5 4516 aa8.1□□□□□ -1.11
NEK3-204ENST00000552973 H3BRN7 92 aa8.09□□□□□ -1.11
NEK3-204ENST00000552973 INSP01308 110 aa8.09□□□□□ -1.11
NEK3-204ENST00000552973 SNRPCP09234 159 aaKnown RBP8.09□□□□□ -1.11
NEK3-204ENST00000552973 OR5G3P0C626 314 aa8.09□□□□□ -1.11
NEK3-204ENST00000552973 HTN1P15515 57 aa8.09□□□□□ -1.11
NEK3-204ENST00000552973 RAP2BP61225 183 aa8.09□□□□□ -1.11
NEK3-204ENST00000552973 RRAS2P62070 204 aaPredicted RBP8.09□□□□□ -1.11
NEK3-204ENST00000552973 RHOBP62745 196 aa8.09□□□□□ -1.11
NEK3-204ENST00000552973 HIST1H1AQ02539 215 aaPredicted RBP8.09□□□□□ -1.11
NEK3-204ENST00000552973 C1orf134Q5TEV5 83 aa8.09□□□□□ -1.11
NEK3-204ENST00000552973 TMEM144Q7Z5S9 345 aa8.09□□□□□ -1.11
NEK3-204ENST00000552973 GPR82Q96P67 336 aa8.09□□□□□ -1.11
NEK3-204ENST00000552973 UHRF2Q96PU4 802 aa8.09□□□□□ -1.11
NEK3-204ENST00000552973 LINC01587Q99440 93 aa8.09□□□□□ -1.11
NEK3-204ENST00000552973 ATG101Q9BSB4 218 aa8.09□□□□□ -1.11
NEK3-204ENST00000552973 SHANK2-AS3Q9BTD1 123 aa8.09□□□□□ -1.11
NEK3-204ENST00000552973 FLVCR2Q9UPI3 526 aa8.09□□□□□ -1.11
NEK3-204ENST00000552973 HIGD1AQ9Y241 93 aa8.09□□□□□ -1.11
NEK3-204ENST00000552973 PCLOQ9Y6V0 5065 aa8.08□□□□□ -1.12
NEK3-204ENST00000552973 C9orf170A2RU37 121 aa8.08□□□□□ -1.12
NEK3-204ENST00000552973 CCDC160A6NGH7 325 aa8.08□□□□□ -1.12
NEK3-204ENST00000552973 PMS2P5A8MQ11 134 aa8.08□□□□□ -1.12
NEK3-204ENST00000552973 F5H768 121 aa8.08□□□□□ -1.12
NEK3-204ENST00000552973 HYPMO75409 117 aa8.08□□□□□ -1.12
NEK3-204ENST00000552973 NUDT3O95989 172 aa8.08□□□□□ -1.12
NEK3-204ENST00000552973 LINC00869P0C866 280 aa8.08□□□□□ -1.12
NEK3-204ENST00000552973 S100A7P31151 101 aa8.08□□□□□ -1.12
NEK3-204ENST00000552973 S100A5P33763 92 aa8.08□□□□□ -1.12
NEK3-204ENST00000552973 ID3Q02535 119 aa8.08□□□□□ -1.12
NEK3-204ENST00000552973 SOHLH1Q5JUK2 328 aa8.08□□□□□ -1.12
NEK3-204ENST00000552973 LRRC20Q8TCA0 184 aa8.08□□□□□ -1.12
NEK3-204ENST00000552973 PPP1R14DQ9NXH3 145 aa8.08□□□□□ -1.12
NEK3-204ENST00000552973 LINC00854A0A1B0GVQ3 168 aa8.07□□□□□ -1.12
NEK3-204ENST00000552973 PLAC8L1A1L4L8 177 aa8.07□□□□□ -1.12
NEK3-204ENST00000552973 LYRM9A8MSI8 78 aa8.07□□□□□ -1.12
NEK3-204ENST00000552973 BOLA2-SMG1P6H3BVE0 249 aa8.07□□□□□ -1.12
NEK3-204ENST00000552973 SSSCA1O60232 199 aa8.07□□□□□ -1.12
NEK3-204ENST00000552973 SCGB1D2O95969 90 aa8.07□□□□□ -1.12
NEK3-204ENST00000552973 RPL7P18124 248 aaKnown RBP8.07□□□□□ -1.12
NEK3-204ENST00000552973 CXCL3P19876 107 aa8.07□□□□□ -1.12
NEK3-204ENST00000552973 C15orf53Q8NAA6 179 aa8.07□□□□□ -1.12
NEK3-204ENST00000552973 OR8A1Q8NGG7 326 aa8.07□□□□□ -1.12
NEK3-204ENST00000552973 METTL15P1P0C7V9 234 aa8.06□□□□□ -1.12
NEK3-204ENST00000552973 ANXA7P20073 488 aaKnown RBP8.06□□□□□ -1.12
NEK3-204ENST00000552973 SLC38A11Q08AI6 406 aa8.06□□□□□ -1.12
NEK3-204ENST00000552973 PSG3Q16557 428 aa8.06□□□□□ -1.12
NEK3-204ENST00000552973 PATE2Q6UY27 113 aa8.06□□□□□ -1.12
NEK3-204ENST00000552973 CCDC190Q86UF4 302 aa8.06□□□□□ -1.12
NEK3-204ENST00000552973 ARL6Q9H0F7 186 aa8.06□□□□□ -1.12
NEK3-204ENST00000552973 H3BTX0 84 aa8.05□□□□□ -1.12
NEK3-204ENST00000552973 INPP1P49441 399 aa8.05□□□□□ -1.12
NEK3-204ENST00000552973 PLP1P60201 277 aa8.05□□□□□ -1.12
NEK3-204ENST00000552973 B2MP61769 119 aa8.05□□□□□ -1.12
NEK3-204ENST00000552973 TNP2Q05952 138 aa8.05□□□□□ -1.12
NEK3-204ENST00000552973 KIR3DS1Q14943 382 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms