RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 SLC39A9Q9NUM3 307 aa12.08□□□□□ -0.48
GCN1-209ENST00000551920 LOC102724200A0A096LPH7 203 aaPredicted RBP12.07□□□□□ -0.48
GCN1-209ENST00000551920 COX7A2P2O60397 106 aa12.07□□□□□ -0.48
GCN1-209ENST00000551920 MPDU1O75352 247 aa12.07□□□□□ -0.48
GCN1-209ENST00000551920 RPL35AP18077 110 aaKnown RBP12.07□□□□□ -0.48
GCN1-209ENST00000551920 GCSAMLQ5JQS6 135 aa12.07□□□□□ -0.48
GCN1-209ENST00000551920 PSMG4Q5JS54 123 aa12.07□□□□□ -0.48
GCN1-209ENST00000551920 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.07□□□□□ -0.48
GCN1-209ENST00000551920 LINC00305Q7Z4B0 112 aa12.07□□□□□ -0.48
GCN1-209ENST00000551920 OR2T35Q8NGX2 323 aa12.07□□□□□ -0.48
GCN1-209ENST00000551920 AQP10Q96PS8 301 aa12.07□□□□□ -0.48
GCN1-209ENST00000551920 KNCNA6PVL3 124 aa12.06□□□□□ -0.48
GCN1-209ENST00000551920 MRPS12O15235 138 aaKnown RBP12.06□□□□□ -0.48
GCN1-209ENST00000551920 GALR1P47211 349 aa12.06□□□□□ -0.48
GCN1-209ENST00000551920 CMC4P56277 68 aaPredicted RBP12.06□□□□□ -0.48
GCN1-209ENST00000551920 RCHY1Q96PM5 261 aa12.06□□□□□ -0.48
GCN1-209ENST00000551920 U3KQK5 164 aa12.06□□□□□ -0.48
GCN1-209ENST00000551920 ELOA3CA0A087WX78 387 aaPredicted RBP12.05□□□□□ -0.48
GCN1-209ENST00000551920 RNF222A6NCQ9 220 aa12.05□□□□□ -0.48
GCN1-209ENST00000551920 SMLR1H3BR10 107 aa12.05□□□□□ -0.48
GCN1-209ENST00000551920 DEFB1P60022 68 aa12.05□□□□□ -0.48
GCN1-209ENST00000551920 FGL1Q08830 312 aa12.05□□□□□ -0.48
GCN1-209ENST00000551920 C10orf113Q5VZT2 155 aa12.05□□□□□ -0.48
GCN1-209ENST00000551920 GPR82Q96P67 336 aa12.05□□□□□ -0.48
GCN1-209ENST00000551920 RSG1Q9BU20 258 aa12.05□□□□□ -0.48
GCN1-209ENST00000551920 FXYD6-FXYD2A0A087WZ82 144 aa12.04□□□□□ -0.48
GCN1-209ENST00000551920 TRAV5A0A0B4J249 113 aa12.04□□□□□ -0.48
GCN1-209ENST00000551920 RPL7P18124 248 aaKnown RBP12.04□□□□□ -0.48
GCN1-209ENST00000551920 PSMB3P49720 205 aa12.04□□□□□ -0.48
GCN1-209ENST00000551920 Q6ZRG5 221 aa12.04□□□□□ -0.48
GCN1-209ENST00000551920 C20orf173Q96LM9 149 aa12.04□□□□□ -0.48
GCN1-209ENST00000551920 SPATA25Q9BR10 227 aa12.04□□□□□ -0.48
GCN1-209ENST00000551920 SEPSECSQ9HD40 501 aaKnown RBP12.04□□□□□ -0.48
GCN1-209ENST00000551920 DNAJC4Q9NNZ3 241 aa12.04□□□□□ -0.48
GCN1-209ENST00000551920 RFNGQ9Y644 331 aa12.04□□□□□ -0.48
GCN1-209ENST00000551920 TRAV8-2A0A0B4J237 113 aa12.03□□□□□ -0.48
GCN1-209ENST00000551920 S100A7P31151 101 aa12.03□□□□□ -0.48
GCN1-209ENST00000551920 SNRPD3P62318 126 aaKnown RBP12.03□□□□□ -0.48
GCN1-209ENST00000551920 TRPT1Q86TN4 253 aaKnown RBP12.03□□□□□ -0.48
GCN1-209ENST00000551920 TNFSF18Q9UNG2 199 aa12.03□□□□□ -0.48
GCN1-209ENST00000551920 A0A087X0K7 114 aa12.02□□□□□ -0.49
GCN1-209ENST00000551920 KIR2DL5BA0A0G2JN68 375 aa12.02□□□□□ -0.49
GCN1-209ENST00000551920 KIR2DL5BA0A0G2JPC4 375 aa12.02□□□□□ -0.49
GCN1-209ENST00000551920 ISLRO14498 428 aa12.02□□□□□ -0.49
GCN1-209ENST00000551920 SNRPCP09234 159 aaKnown RBP12.02□□□□□ -0.49
GCN1-209ENST00000551920 MEOX2P50222 304 aa12.02□□□□□ -0.49
GCN1-209ENST00000551920 ACTL10Q5JWF8 245 aa12.02□□□□□ -0.49
GCN1-209ENST00000551920 GDF5OSQ5U4N7 250 aa12.02□□□□□ -0.49
GCN1-209ENST00000551920 SPATA31B1PQ5VZV4 182 aa12.02□□□□□ -0.49
GCN1-209ENST00000551920 IGFL4Q6B9Z1 124 aa12.02□□□□□ -0.49
GCN1-209ENST00000551920 KIR2DL5AQ8N109 375 aa12.02□□□□□ -0.49
GCN1-209ENST00000551920 OR1L4Q8NGR5 311 aa12.02□□□□□ -0.49
GCN1-209ENST00000551920 KIR2DL5BQ8NHK3 375 aa12.02□□□□□ -0.49
GCN1-209ENST00000551920 PFDN5Q99471 154 aa12.02□□□□□ -0.49
GCN1-209ENST00000551920 PARD6GQ9BYG4 376 aaPredicted RBP12.02□□□□□ -0.49
GCN1-209ENST00000551920 ZMAT4Q9H898 229 aa12.02□□□□□ -0.49
GCN1-209ENST00000551920 IGLC2P0DOY2 106 aa12.01□□□□□ -0.49
GCN1-209ENST00000551920 ATF4P18848 351 aaPredicted RBP12.01□□□□□ -0.49
GCN1-209ENST00000551920 APOC4P55056 127 aa12.01□□□□□ -0.49
GCN1-209ENST00000551920 Q6ZNX1 250 aa12.01□□□□□ -0.49
GCN1-209ENST00000551920 S100A7AQ86SG5 101 aa12.01□□□□□ -0.49
GCN1-209ENST00000551920 RNF182Q8N6D2 247 aa12.01□□□□□ -0.49
GCN1-209ENST00000551920 GATAD1Q8WUU5 269 aa12.01□□□□□ -0.49
GCN1-209ENST00000551920 C16orf92Q96LL3 132 aa12.01□□□□□ -0.49
GCN1-209ENST00000551920 LINC00052Q96N35 136 aa12.01□□□□□ -0.49
GCN1-209ENST00000551920 F6UB75 175 aa12□□□□□ -0.49
GCN1-209ENST00000551920 H3BQ15 152 aa12□□□□□ -0.49
GCN1-209ENST00000551920 H3BTX0 84 aa12□□□□□ -0.49
GCN1-209ENST00000551920 SLC17A3O00476 420 aa12□□□□□ -0.49
GCN1-209ENST00000551920 IFNA5P01569 189 aa12□□□□□ -0.49
GCN1-209ENST00000551920 GIG44P09565 113 aaPredicted RBP12□□□□□ -0.49
GCN1-209ENST00000551920 C4BPBP20851 252 aa12□□□□□ -0.49
GCN1-209ENST00000551920 ID1P41134 155 aa12□□□□□ -0.49
GCN1-209ENST00000551920 DEFB135Q30KP9 77 aa12□□□□□ -0.49
GCN1-209ENST00000551920 STHQ8IWL8 128 aa12□□□□□ -0.49
GCN1-209ENST00000551920 ZNF709Q8N972 641 aa12□□□□□ -0.49
GCN1-209ENST00000551920 OVOL2Q9BRP0 275 aa12□□□□□ -0.49
GCN1-209ENST00000551920 KCNIP2Q9NS61 270 aa12□□□□□ -0.49
GCN1-209ENST00000551920 H3BMM0 161 aa11.99□□□□□ -0.49
GCN1-209ENST00000551920 HLA-DRB4P13762 266 aa11.99□□□□□ -0.49
GCN1-209ENST00000551920 HLA-DMBP28068 263 aa11.99□□□□□ -0.49
GCN1-209ENST00000551920 SAMD13Q5VXD3 122 aa11.99□□□□□ -0.49
GCN1-209ENST00000551920 MIR17HGQ75NE6 70 aa11.99□□□□□ -0.49
GCN1-209ENST00000551920 BPIFA4PQ86YQ2 179 aa11.99□□□□□ -0.49
GCN1-209ENST00000551920 SCGB1C1Q8TD33 95 aa11.99□□□□□ -0.49
GCN1-209ENST00000551920 FAM167A-AS1Q96KT0 104 aa11.99□□□□□ -0.49
GCN1-209ENST00000551920 CSTL1Q9H114 145 aa11.99□□□□□ -0.49
GCN1-209ENST00000551920 HLA-DRB4X5D2U9 266 aa11.99□□□□□ -0.49
GCN1-209ENST00000551920 C17orf112F2Z3M2 114 aa11.98□□□□□ -0.49
GCN1-209ENST00000551920 ARPC5O15511 151 aa11.98□□□□□ -0.49
GCN1-209ENST00000551920 CA1P00915 261 aaPredicted RBP11.98□□□□□ -0.49
GCN1-209ENST00000551920 PRB4P10163 310 aaPredicted RBP11.98□□□□□ -0.49
GCN1-209ENST00000551920 FFAR4Q5NUL3 377 aa11.98□□□□□ -0.49
GCN1-209ENST00000551920 FAM78BQ5VT40 261 aa11.98□□□□□ -0.49
GCN1-209ENST00000551920 Q6ZWC4 215 aa11.98□□□□□ -0.49
GCN1-209ENST00000551920 INO80EQ8NBZ0 244 aaPredicted RBP11.98□□□□□ -0.49
GCN1-209ENST00000551920 OR11H4Q8NGC9 324 aa11.98□□□□□ -0.49
GCN1-209ENST00000551920 SLC25A2Q9BXI2 301 aa11.98□□□□□ -0.49
GCN1-209ENST00000551920 SAV1Q9H4B6 383 aaPredicted RBP11.98□□□□□ -0.49
GCN1-209ENST00000551920 RNF24Q9Y225 148 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms