RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 SLC25A4P12235 298 aa8.17□□□□□ -1.1
PTCH1-222ENST00000551425 AZU1P20160 251 aa8.17□□□□□ -1.1
PTCH1-222ENST00000551425 M6PRP20645 277 aa8.17□□□□□ -1.1
PTCH1-222ENST00000551425 RND2P52198 227 aa8.17□□□□□ -1.1
PTCH1-222ENST00000551425 ASAH1Q13510 395 aa8.17□□□□□ -1.1
PTCH1-222ENST00000551425 TBC1D26Q86UD7 250 aa8.17□□□□□ -1.1
PTCH1-222ENST00000551425 CCDC71LQ8N9Z2 235 aa8.17□□□□□ -1.1
PTCH1-222ENST00000551425 GPR146Q96CH1 333 aa8.17□□□□□ -1.1
PTCH1-222ENST00000551425 DOK5Q9P104 306 aa8.17□□□□□ -1.1
PTCH1-222ENST00000551425 H3BNG1 76 aa8.16□□□□□ -1.1
PTCH1-222ENST00000551425 P0C879 139 aa8.16□□□□□ -1.1
PTCH1-222ENST00000551425 RD3LP0DJH9 198 aa8.16□□□□□ -1.1
PTCH1-222ENST00000551425 CCR6P51684 374 aa8.16□□□□□ -1.1
PTCH1-222ENST00000551425 PIGPP57054 158 aa8.16□□□□□ -1.1
PTCH1-222ENST00000551425 RND3P61587 244 aa8.16□□□□□ -1.1
PTCH1-222ENST00000551425 IFITM3Q01628 133 aa8.16□□□□□ -1.1
PTCH1-222ENST00000551425 OR5I1Q13606 314 aa8.16□□□□□ -1.1
PTCH1-222ENST00000551425 DEFB104AQ8WTQ1 72 aa8.16□□□□□ -1.1
PTCH1-222ENST00000551425 RPRMQ9NS64 109 aa8.16□□□□□ -1.1
PTCH1-222ENST00000551425 COPZ2Q9P299 210 aa8.16□□□□□ -1.1
PTCH1-222ENST00000551425 PFDN2Q9UHV9 154 aa8.16□□□□□ -1.1
PTCH1-222ENST00000551425 FAM240BA0A1B0GVZ2 78 aa8.15□□□□□ -1.1
PTCH1-222ENST00000551425 NDUFB6O95139 128 aa8.15□□□□□ -1.1
PTCH1-222ENST00000551425 IGKV1-5P01602 117 aa8.15□□□□□ -1.1
PTCH1-222ENST00000551425 PLA2G1BP04054 148 aaKnown RBP8.15□□□□□ -1.1
PTCH1-222ENST00000551425 PI3P19957 117 aa8.15□□□□□ -1.1
PTCH1-222ENST00000551425 BTCP35070 178 aa8.15□□□□□ -1.1
PTCH1-222ENST00000551425 C1orf194Q5T5A4 169 aa8.15□□□□□ -1.1
PTCH1-222ENST00000551425 SAMD13Q5VXD3 122 aa8.15□□□□□ -1.1
PTCH1-222ENST00000551425 NFE4Q86UQ8 179 aa8.15□□□□□ -1.1
PTCH1-222ENST00000551425 OR51G1Q8NGK1 321 aa8.15□□□□□ -1.1
PTCH1-222ENST00000551425 OR10J6PQ8NGY7 276 aa8.15□□□□□ -1.1
PTCH1-222ENST00000551425 RTBDNQ9BSG5 229 aaPredicted RBP8.15□□□□□ -1.1
PTCH1-222ENST00000551425 PDCD10Q9BUL8 212 aa8.15□□□□□ -1.1
PTCH1-222ENST00000551425 ENY2Q9NPA8 101 aa8.15□□□□□ -1.1
PTCH1-222ENST00000551425 TIMM8BQ9Y5J9 83 aaPredicted RBP8.15□□□□□ -1.1
PTCH1-222ENST00000551425 M0R2Z0 102 aa8.14□□□□□ -1.11
PTCH1-222ENST00000551425 B3GALNT1O75752 331 aa8.14□□□□□ -1.11
PTCH1-222ENST00000551425 PSG1P11464 419 aa8.14□□□□□ -1.11
PTCH1-222ENST00000551425 HTR2BP41595 481 aa8.14□□□□□ -1.11
PTCH1-222ENST00000551425 SPINK13Q1W4C9 94 aa8.14□□□□□ -1.11
PTCH1-222ENST00000551425 OR8G2PQ6IF36 304 aa8.14□□□□□ -1.11
PTCH1-222ENST00000551425 SLC24A4Q8NFF2 622 aa8.14□□□□□ -1.11
PTCH1-222ENST00000551425 OR11H7Q8NGC8 314 aa8.14□□□□□ -1.11
PTCH1-222ENST00000551425 ENKURQ8TC29 256 aa8.14□□□□□ -1.11
PTCH1-222ENST00000551425 RNASEH2CQ8TDP1 164 aaKnown RBP8.14□□□□□ -1.11
PTCH1-222ENST00000551425 C16orf74Q96GX8 76 aa8.14□□□□□ -1.11
PTCH1-222ENST00000551425 C20orf173Q96LM9 149 aa8.14□□□□□ -1.11
PTCH1-222ENST00000551425 KCNIP3Q9Y2W7 256 aa8.14□□□□□ -1.11
PTCH1-222ENST00000551425 TEX13DA0A0J9YY54 714 aaPredicted RBP8.13□□□□□ -1.11
PTCH1-222ENST00000551425 A0A0J9YY99 117 aa8.13□□□□□ -1.11
PTCH1-222ENST00000551425 CRYM-AS1A6NIL9 109 aa8.13□□□□□ -1.11
PTCH1-222ENST00000551425 SIVA1O15304 175 aa8.13□□□□□ -1.11
PTCH1-222ENST00000551425 NXPH3O95157 252 aa8.13□□□□□ -1.11
PTCH1-222ENST00000551425 TCRBP04435 133 aa8.13□□□□□ -1.11
PTCH1-222ENST00000551425 SUPT4H1P63272 117 aaKnown RBP8.13□□□□□ -1.11
PTCH1-222ENST00000551425 TMED4Q7Z7H5 227 aa8.13□□□□□ -1.11
PTCH1-222ENST00000551425 NPIPB3Q92617 1050 aa8.13□□□□□ -1.11
PTCH1-222ENST00000551425 RNF125Q96EQ8 232 aa8.13□□□□□ -1.11
PTCH1-222ENST00000551425 NAA60Q9H7X0 242 aa8.13□□□□□ -1.11
PTCH1-222ENST00000551425 TNFRSF18Q9Y5U5 241 aa8.13□□□□□ -1.11
PTCH1-222ENST00000551425 C3orf85A0A1B0GTC6 90 aa8.12□□□□□ -1.11
PTCH1-222ENST00000551425 ANXA3P12429 323 aa8.12□□□□□ -1.11
PTCH1-222ENST00000551425 AKR1C4P17516 323 aa8.12□□□□□ -1.11
PTCH1-222ENST00000551425 HOXA5P20719 270 aa8.12□□□□□ -1.11
PTCH1-222ENST00000551425 CNN1P51911 297 aaKnown RBP8.12□□□□□ -1.11
PTCH1-222ENST00000551425 AKR1C2P52895 323 aa8.12□□□□□ -1.11
PTCH1-222ENST00000551425 TAS2R60P59551 318 aa8.12□□□□□ -1.11
PTCH1-222ENST00000551425 UBE2MP61081 183 aaKnown RBP8.12□□□□□ -1.11
PTCH1-222ENST00000551425 C2orf83Q53S99 150 aa8.12□□□□□ -1.11
PTCH1-222ENST00000551425 TMEM128Q5BJH2 165 aa8.12□□□□□ -1.11
PTCH1-222ENST00000551425 ETFRF1Q6IPR1 90 aa8.12□□□□□ -1.11
PTCH1-222ENST00000551425 BAP18Q8IXM2 172 aa8.12□□□□□ -1.11
PTCH1-222ENST00000551425 TMEM256Q8N2U0 113 aa8.12□□□□□ -1.11
PTCH1-222ENST00000551425 LINC00612Q8N6U2 182 aa8.12□□□□□ -1.11
PTCH1-222ENST00000551425 C20orf85Q9H1P6 137 aa8.12□□□□□ -1.11
PTCH1-222ENST00000551425 NOP10Q9NPE3 64 aaKnown RBP8.12□□□□□ -1.11
PTCH1-222ENST00000551425 RNF213Q63HN8 5207 aa8.11□□□□□ -1.11
PTCH1-222ENST00000551425 PIGBOS1A0A0B4J2F0 54 aa8.11□□□□□ -1.11
PTCH1-222ENST00000551425 ADAP1O75689 374 aa8.11□□□□□ -1.11
PTCH1-222ENST00000551425 ATG12O94817 140 aa8.11□□□□□ -1.11
PTCH1-222ENST00000551425 DUSP14O95147 198 aaKnown RBP8.11□□□□□ -1.11
PTCH1-222ENST00000551425 H2AFB2P0C5Z0 115 aa8.11□□□□□ -1.11
PTCH1-222ENST00000551425 MEOX2P50222 304 aa8.11□□□□□ -1.11
PTCH1-222ENST00000551425 SPCS3P61009 180 aa8.11□□□□□ -1.11
PTCH1-222ENST00000551425 AARDQ4LEZ3 155 aa8.11□□□□□ -1.11
PTCH1-222ENST00000551425 ZNF493Q6ZR52 646 aa8.11□□□□□ -1.11
PTCH1-222ENST00000551425 TMEM144Q7Z5S9 345 aa8.11□□□□□ -1.11
PTCH1-222ENST00000551425 NRARPQ7Z6K4 114 aa8.11□□□□□ -1.11
PTCH1-222ENST00000551425 RNASE8Q8TDE3 154 aaKnown RBP8.11□□□□□ -1.11
PTCH1-222ENST00000551425 LINC01587Q99440 93 aa8.11□□□□□ -1.11
PTCH1-222ENST00000551425 PBDC1Q9BVG4 233 aa8.11□□□□□ -1.11
PTCH1-222ENST00000551425 FLVCR2Q9UPI3 526 aa8.11□□□□□ -1.11
PTCH1-222ENST00000551425 TRAV6A0A075B6T7 132 aa8.1□□□□□ -1.11
PTCH1-222ENST00000551425 A0A096LPF7 62 aa8.1□□□□□ -1.11
PTCH1-222ENST00000551425 PTTG1O95997 202 aa8.1□□□□□ -1.11
PTCH1-222ENST00000551425 OXTP01178 125 aa8.1□□□□□ -1.11
PTCH1-222ENST00000551425 OR5AC1P0C628 307 aa8.1□□□□□ -1.11
PTCH1-222ENST00000551425 UCP1P25874 307 aa8.1□□□□□ -1.11
PTCH1-222ENST00000551425 TRIM16LQ309B1 348 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms