RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 PATE2Q6UY27 113 aa9.36□□□□□ -0.91
NPAS3-209ENST00000551008 Q6ZTC4 211 aa9.36□□□□□ -0.91
NPAS3-209ENST00000551008 LINC00528Q8N1L1 170 aa9.36□□□□□ -0.91
NPAS3-209ENST00000551008 BPIFCQ8NFQ6 507 aa9.36□□□□□ -0.91
NPAS3-209ENST00000551008 OR1B1Q8NGR6 318 aa9.36□□□□□ -0.91
NPAS3-209ENST00000551008 PPP1R14BQ96C90 147 aa9.36□□□□□ -0.91
NPAS3-209ENST00000551008 SHANK2-AS3Q9BTD1 123 aa9.36□□□□□ -0.91
NPAS3-209ENST00000551008 NUDT15Q9NV35 164 aa9.36□□□□□ -0.91
NPAS3-209ENST00000551008 DOK5Q9P104 306 aa9.36□□□□□ -0.91
NPAS3-209ENST00000551008 SMCO3A2RU48 225 aa9.35□□□□□ -0.91
NPAS3-209ENST00000551008 FNDC10F2Z333 226 aa9.35□□□□□ -0.91
NPAS3-209ENST00000551008 MRPS12O15235 138 aaKnown RBP9.35□□□□□ -0.91
NPAS3-209ENST00000551008 SLC38A11Q08AI6 406 aa9.35□□□□□ -0.91
NPAS3-209ENST00000551008 IL15RAQ13261 267 aa9.35□□□□□ -0.91
NPAS3-209ENST00000551008 C12orf74Q32Q52 190 aa9.35□□□□□ -0.91
NPAS3-209ENST00000551008 CNPY1Q3B7I2 92 aa9.35□□□□□ -0.91
NPAS3-209ENST00000551008 FAM78BQ5VT40 261 aa9.35□□□□□ -0.91
NPAS3-209ENST00000551008 ZNF767PQ75MW2 155 aa9.35□□□□□ -0.91
NPAS3-209ENST00000551008 UHRF2Q96PU4 802 aa9.35□□□□□ -0.91
NPAS3-209ENST00000551008 RSG1Q9BU20 258 aa9.35□□□□□ -0.91
NPAS3-209ENST00000551008 CCDC32Q9BV29 185 aa9.35□□□□□ -0.91
NPAS3-209ENST00000551008 SLC25A39Q9BZJ4 359 aaPredicted RBP9.35□□□□□ -0.91
NPAS3-209ENST00000551008 GSKIPQ9P0R6 139 aa9.35□□□□□ -0.91
NPAS3-209ENST00000551008 PFDN2Q9UHV9 154 aa9.35□□□□□ -0.91
NPAS3-209ENST00000551008 APLNQ9ULZ1 77 aa9.35□□□□□ -0.91
NPAS3-209ENST00000551008 LINC00869P0C866 280 aa9.34□□□□□ -0.91
NPAS3-209ENST00000551008 ID1P41134 155 aa9.34□□□□□ -0.91
NPAS3-209ENST00000551008 LGALS9CQ6DKI2 356 aa9.34□□□□□ -0.91
NPAS3-209ENST00000551008 C1orf158Q8N1D5 194 aa9.34□□□□□ -0.91
NPAS3-209ENST00000551008 RNF182Q8N6D2 247 aa9.34□□□□□ -0.91
NPAS3-209ENST00000551008 ZNF431Q8TF32 576 aaPredicted RBP9.34□□□□□ -0.91
NPAS3-209ENST00000551008 NEU1Q99519 415 aa9.34□□□□□ -0.91
NPAS3-209ENST00000551008 TMEM147Q9BVK8 224 aa9.34□□□□□ -0.91
NPAS3-209ENST00000551008 C1QTNF4Q9BXJ3 329 aa9.34□□□□□ -0.91
NPAS3-209ENST00000551008 A6NHS1 94 aa9.33□□□□□ -0.92
NPAS3-209ENST00000551008 IL5P05113 134 aa9.33□□□□□ -0.92
NPAS3-209ENST00000551008 GALR1P47211 349 aa9.33□□□□□ -0.92
NPAS3-209ENST00000551008 MEOX2P50222 304 aa9.33□□□□□ -0.92
NPAS3-209ENST00000551008 IFITM3Q01628 133 aa9.33□□□□□ -0.92
NPAS3-209ENST00000551008 MORN5Q5VZ52 161 aa9.33□□□□□ -0.92
NPAS3-209ENST00000551008 OR4B1Q8NGF8 309 aa9.33□□□□□ -0.92
NPAS3-209ENST00000551008 C2CD4CQ8TF44 421 aa9.33□□□□□ -0.92
NPAS3-209ENST00000551008 C16orf92Q96LL3 132 aa9.33□□□□□ -0.92
NPAS3-209ENST00000551008 MGST2Q99735 147 aa9.33□□□□□ -0.92
NPAS3-209ENST00000551008 NPVFQ9HCQ7 196 aa9.33□□□□□ -0.92
NPAS3-209ENST00000551008 HIGD1AQ9Y241 93 aa9.33□□□□□ -0.92
NPAS3-209ENST00000551008 CRXO43186 299 aaPredicted RBP9.32□□□□□ -0.92
NPAS3-209ENST00000551008 H2AFB2P0C5Z0 115 aa9.32□□□□□ -0.92
NPAS3-209ENST00000551008 PRB4P10163 310 aaPredicted RBP9.32□□□□□ -0.92
NPAS3-209ENST00000551008 NUTF2P61970 127 aaKnown RBP9.32□□□□□ -0.92
NPAS3-209ENST00000551008 SELENOTP62341 195 aa9.32□□□□□ -0.92
NPAS3-209ENST00000551008 LINC00299Q6ZSB3 139 aa9.32□□□□□ -0.92
NPAS3-209ENST00000551008 OR10P1Q8NGE3 313 aa9.32□□□□□ -0.92
NPAS3-209ENST00000551008 A0A087X0K7 114 aa9.31□□□□□ -0.92
NPAS3-209ENST00000551008 AGPAT2O15120 278 aa9.31□□□□□ -0.92
NPAS3-209ENST00000551008 HYPMO75409 117 aa9.31□□□□□ -0.92
NPAS3-209ENST00000551008 PSG9Q00887 426 aa9.31□□□□□ -0.92
NPAS3-209ENST00000551008 ASAH1Q13510 395 aa9.31□□□□□ -0.92
NPAS3-209ENST00000551008 SPATA31B1PQ5VZV4 182 aa9.31□□□□□ -0.92
NPAS3-209ENST00000551008 TEPPQ6URK8 271 aa9.31□□□□□ -0.92
NPAS3-209ENST00000551008 C12orf45Q8N5I9 185 aaPredicted RBP9.31□□□□□ -0.92
NPAS3-209ENST00000551008 OR11H7Q8NGC8 314 aa9.31□□□□□ -0.92
NPAS3-209ENST00000551008 GPR82Q96P67 336 aa9.31□□□□□ -0.92
NPAS3-209ENST00000551008 ARL6Q9H0F7 186 aa9.31□□□□□ -0.92
NPAS3-209ENST00000551008 RPRMQ9NS64 109 aa9.31□□□□□ -0.92
NPAS3-209ENST00000551008 LSM5Q9Y4Y9 91 aaKnown RBP9.31□□□□□ -0.92
NPAS3-209ENST00000551008 TRAV10A0A0B4J240 114 aa9.3□□□□□ -0.92
NPAS3-209ENST00000551008 IGSF23A1L1A6 192 aa9.3□□□□□ -0.92
NPAS3-209ENST00000551008 FAM24AA6NFZ4 105 aa9.3□□□□□ -0.92
NPAS3-209ENST00000551008 IGLL5B9A064 214 aa9.3□□□□□ -0.92
NPAS3-209ENST00000551008 C11orf94C9JXX5 98 aa9.3□□□□□ -0.92
NPAS3-209ENST00000551008 OR5G3P0C626 314 aa9.3□□□□□ -0.92
NPAS3-209ENST00000551008 CNN1P51911 297 aaKnown RBP9.3□□□□□ -0.92
NPAS3-209ENST00000551008 RAP2BP61225 183 aa9.3□□□□□ -0.92
NPAS3-209ENST00000551008 SAMD13Q5VXD3 122 aa9.3□□□□□ -0.92
NPAS3-209ENST00000551008 TMEM37Q8WXS4 190 aa9.3□□□□□ -0.92
NPAS3-209ENST00000551008 C2orf50Q96LR7 162 aa9.3□□□□□ -0.92
NPAS3-209ENST00000551008 ARV1Q9H2C2 271 aa9.3□□□□□ -0.92
NPAS3-209ENST00000551008 MGAT4CQ9UBM8 478 aa9.3□□□□□ -0.92
NPAS3-209ENST00000551008 NACAE9PAV3 2078 aa9.3□□□□□ -0.92
NPAS3-209ENST00000551008 IGHV4-4A0A075B6R2 117 aa9.29□□□□□ -0.92
NPAS3-209ENST00000551008 IGHV3OR16-12A0A075B7B8 117 aa9.29□□□□□ -0.92
NPAS3-209ENST00000551008 FAM25EA8MYX2 175 aa9.29□□□□□ -0.92
NPAS3-209ENST00000551008 M0R2Z0 102 aa9.29□□□□□ -0.92
NPAS3-209ENST00000551008 CST7O76096 145 aa9.29□□□□□ -0.92
NPAS3-209ENST00000551008 PRM2P04554 102 aa9.29□□□□□ -0.92
NPAS3-209ENST00000551008 RPL7P18124 248 aaKnown RBP9.29□□□□□ -0.92
NPAS3-209ENST00000551008 CXCL3P19876 107 aa9.29□□□□□ -0.92
NPAS3-209ENST00000551008 RAB32Q13637 225 aa9.29□□□□□ -0.92
NPAS3-209ENST00000551008 VWC2Q2TAL6 325 aa9.29□□□□□ -0.92
NPAS3-209ENST00000551008 EBLN2Q6P2I7 272 aa9.29□□□□□ -0.92
NPAS3-209ENST00000551008 GGACTQ9BVM4 153 aa9.29□□□□□ -0.92
NPAS3-209ENST00000551008 FAT2Q9NYQ8 4349 aa9.29□□□□□ -0.92
NPAS3-209ENST00000551008 DNAH2Q9P225 4427 aa9.28□□□□□ -0.92
NPAS3-209ENST00000551008 HECTD4Q9Y4D8 3996 aa9.28□□□□□ -0.92
NPAS3-209ENST00000551008 FAM240BA0A1B0GVZ2 78 aa9.28□□□□□ -0.92
NPAS3-209ENST00000551008 C5orf51A6NDU8 294 aa9.28□□□□□ -0.92
NPAS3-209ENST00000551008 SMIM9A6NGZ8 99 aa9.28□□□□□ -0.92
NPAS3-209ENST00000551008 SLC17A3O00476 420 aa9.28□□□□□ -0.92
NPAS3-209ENST00000551008 UPK1BO75841 260 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms