RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 TRIM63Q969Q1 353 aa15.31■□□□□ 0.04
SMARCC2-210ENST00000550519 GPR82Q96P67 336 aa15.31■□□□□ 0.04
SMARCC2-210ENST00000550519 TMED3Q9Y3Q3 217 aa15.31■□□□□ 0.04
SMARCC2-210ENST00000550519 TRAV8-2A0A0B4J237 113 aa15.3■□□□□ 0.04
SMARCC2-210ENST00000550519 WRBO00258 174 aa15.3■□□□□ 0.04
SMARCC2-210ENST00000550519 VAMP1P23763 118 aa15.3■□□□□ 0.04
SMARCC2-210ENST00000550519 FAM3BP58499 235 aaPredicted RBP15.3■□□□□ 0.04
SMARCC2-210ENST00000550519 C15orf53Q8NAA6 179 aa15.3■□□□□ 0.04
SMARCC2-210ENST00000550519 NACAE9PAV3 2078 aa15.29■□□□□ 0.04
SMARCC2-210ENST00000550519 LYRM9A8MSI8 78 aa15.29■□□□□ 0.04
SMARCC2-210ENST00000550519 ZNF705GA8MUZ8 300 aaPredicted RBP15.29■□□□□ 0.04
SMARCC2-210ENST00000550519 M0R2Z0 102 aa15.29■□□□□ 0.04
SMARCC2-210ENST00000550519 DUSP14O95147 198 aaKnown RBP15.29■□□□□ 0.04
SMARCC2-210ENST00000550519 PRM2P04554 102 aa15.29■□□□□ 0.04
SMARCC2-210ENST00000550519 SPINK13Q1W4C9 94 aa15.29■□□□□ 0.04
SMARCC2-210ENST00000550519 IGFL4Q6B9Z1 124 aa15.29■□□□□ 0.04
SMARCC2-210ENST00000550519 TMEM147Q9BVK8 224 aa15.29■□□□□ 0.04
SMARCC2-210ENST00000550519 ABCA13Q86UQ4 5058 aa15.28■□□□□ 0.04
SMARCC2-210ENST00000550519 SFT2D2O95562 160 aa15.28■□□□□ 0.04
SMARCC2-210ENST00000550519 TSPOP30536 169 aa15.28■□□□□ 0.04
SMARCC2-210ENST00000550519 S100A7P31151 101 aa15.28■□□□□ 0.04
SMARCC2-210ENST00000550519 AP3S2P59780 193 aa15.28■□□□□ 0.04
SMARCC2-210ENST00000550519 SPANXN5Q5MJ07 72 aa15.28■□□□□ 0.04
SMARCC2-210ENST00000550519 ZNF575Q86XF7 245 aa15.28■□□□□ 0.04
SMARCC2-210ENST00000550519 TOMM5Q8N4H5 51 aa15.28■□□□□ 0.04
SMARCC2-210ENST00000550519 SLC25A21Q9BQT8 299 aaPredicted RBP15.28■□□□□ 0.04
SMARCC2-210ENST00000550519 INSP01308 110 aa15.27■□□□□ 0.04
SMARCC2-210ENST00000550519 B2MP61769 119 aa15.27■□□□□ 0.04
SMARCC2-210ENST00000550519 AKR1C1Q04828 323 aa15.27■□□□□ 0.04
SMARCC2-210ENST00000550519 PPP1R1AQ13522 171 aa15.27■□□□□ 0.04
SMARCC2-210ENST00000550519 ACOT7LQ6ZUV0 252 aa15.27■□□□□ 0.04
SMARCC2-210ENST00000550519 MCFD2Q8NI22 146 aa15.27■□□□□ 0.04
SMARCC2-210ENST00000550519 H3BMQ9 156 aa15.26■□□□□ 0.03
SMARCC2-210ENST00000550519 H3BRN7 92 aa15.26■□□□□ 0.03
SMARCC2-210ENST00000550519 HOXB5P09067 269 aa15.26■□□□□ 0.03
SMARCC2-210ENST00000550519 TMEM144Q7Z5S9 345 aa15.26■□□□□ 0.03
SMARCC2-210ENST00000550519 RNF182Q8N6D2 247 aa15.26■□□□□ 0.03
SMARCC2-210ENST00000550519 SLC25A39Q9BZJ4 359 aaPredicted RBP15.26■□□□□ 0.03
SMARCC2-210ENST00000550519 STRAPQ9Y3F4 350 aaKnown RBP15.26■□□□□ 0.03
SMARCC2-210ENST00000550519 PLAC8L1A1L4L8 177 aa15.25■□□□□ 0.03
SMARCC2-210ENST00000550519 H3BP45 60 aa15.25■□□□□ 0.03
SMARCC2-210ENST00000550519 BAP18Q8IXM2 172 aa15.25■□□□□ 0.03
SMARCC2-210ENST00000550519 DEDD2Q8WXF8 326 aa15.25■□□□□ 0.03
SMARCC2-210ENST00000550519 SHANK2-AS3Q9BTD1 123 aa15.25■□□□□ 0.03
SMARCC2-210ENST00000550519 DEFB130BP0DP73 79 aa15.24■□□□□ 0.03
SMARCC2-210ENST00000550519 DEFB130AP0DP74 79 aa15.24■□□□□ 0.03
SMARCC2-210ENST00000550519 AZU1P20160 251 aa15.24■□□□□ 0.03
SMARCC2-210ENST00000550519 FGL1Q08830 312 aa15.24■□□□□ 0.03
SMARCC2-210ENST00000550519 PYDC2Q56P42 97 aa15.24■□□□□ 0.03
SMARCC2-210ENST00000550519 CYP2G1PQ6ZSU1 146 aa15.24■□□□□ 0.03
SMARCC2-210ENST00000550519 ATG101Q9BSB4 218 aa15.24■□□□□ 0.03
SMARCC2-210ENST00000550519 BOLA2-SMG1P6H3BVE0 249 aa15.23■□□□□ 0.03
SMARCC2-210ENST00000550519 IL5P05113 134 aa15.23■□□□□ 0.03
SMARCC2-210ENST00000550519 RPL7P18124 248 aaKnown RBP15.23■□□□□ 0.03
SMARCC2-210ENST00000550519 PLP1P60201 277 aa15.23■□□□□ 0.03
SMARCC2-210ENST00000550519 ID3Q02535 119 aa15.23■□□□□ 0.03
SMARCC2-210ENST00000550519 ZNF738Q8NE65 137 aa15.23■□□□□ 0.03
SMARCC2-210ENST00000550519 KRTAP4-5Q9BYR2 181 aa15.23■□□□□ 0.03
SMARCC2-210ENST00000550519 HIGD1AQ9Y241 93 aa15.23■□□□□ 0.03
SMARCC2-210ENST00000550519 V9GYH0 126 aa15.23■□□□□ 0.03
SMARCC2-210ENST00000550519 TRAV12-2A0A075B6T6 113 aa15.22■□□□□ 0.03
SMARCC2-210ENST00000550519 CXCL3P19876 107 aa15.22■□□□□ 0.03
SMARCC2-210ENST00000550519 RAP2BP61225 183 aa15.22■□□□□ 0.03
SMARCC2-210ENST00000550519 FCN2Q15485 313 aa15.22■□□□□ 0.03
SMARCC2-210ENST00000550519 ZNRF2Q8NHG8 242 aa15.22■□□□□ 0.03
SMARCC2-210ENST00000550519 PMS2P5A8MQ11 134 aa15.21■□□□□ 0.03
SMARCC2-210ENST00000550519 F5H768 121 aa15.21■□□□□ 0.03
SMARCC2-210ENST00000550519 NOL3O60936 208 aaKnown RBP15.21■□□□□ 0.03
SMARCC2-210ENST00000550519 HYPMO75409 117 aa15.21■□□□□ 0.03
SMARCC2-210ENST00000550519 TNP2Q05952 138 aa15.21■□□□□ 0.03
SMARCC2-210ENST00000550519 TMEM256Q8N2U0 113 aa15.21■□□□□ 0.03
SMARCC2-210ENST00000550519 OR8A1Q8NGG7 326 aa15.21■□□□□ 0.03
SMARCC2-210ENST00000550519 A0A087X0K7 114 aa15.2■□□□□ 0.02
SMARCC2-210ENST00000550519 NBDYA0A0U1RRE5 68 aa15.2■□□□□ 0.02
SMARCC2-210ENST00000550519 SMCO3A2RU48 225 aa15.2■□□□□ 0.02
SMARCC2-210ENST00000550519 ATP5G1P05496 136 aa15.2■□□□□ 0.02
SMARCC2-210ENST00000550519 ATP5G3P48201 142 aa15.2■□□□□ 0.02
SMARCC2-210ENST00000550519 POLR2GP62487 172 aaKnown RBP eCLIP15.2■□□□□ 0.02
SMARCC2-210ENST00000550519 CBY3A6NI87 242 aa15.19■□□□□ 0.02
SMARCC2-210ENST00000550519 ADAP1O75689 374 aa15.19■□□□□ 0.02
SMARCC2-210ENST00000550519 LINC00869P0C866 280 aa15.19■□□□□ 0.02
SMARCC2-210ENST00000550519 TAS2R60P59551 318 aa15.19■□□□□ 0.02
SMARCC2-210ENST00000550519 UBE2MP61081 183 aaKnown RBP15.19■□□□□ 0.02
SMARCC2-210ENST00000550519 SELENOTP62341 195 aa15.19■□□□□ 0.02
SMARCC2-210ENST00000550519 RHOBP62745 196 aa15.19■□□□□ 0.02
SMARCC2-210ENST00000550519 HIST1H1AQ02539 215 aaPredicted RBP15.19■□□□□ 0.02
SMARCC2-210ENST00000550519 PSG3Q16557 428 aa15.19■□□□□ 0.02
SMARCC2-210ENST00000550519 UHRF2Q96PU4 802 aa15.19■□□□□ 0.02
SMARCC2-210ENST00000550519 LINC01587Q99440 93 aa15.19■□□□□ 0.02
SMARCC2-210ENST00000550519 PSENENQ9NZ42 101 aa15.19■□□□□ 0.02
SMARCC2-210ENST00000550519 HSPG2P98160 4391 aa15.19■□□□□ 0.02
SMARCC2-210ENST00000550519 NUDT3O95989 172 aa15.18■□□□□ 0.02
SMARCC2-210ENST00000550519 OR5G3P0C626 314 aa15.18■□□□□ 0.02
SMARCC2-210ENST00000550519 C9orf170A2RU37 121 aa15.17■□□□□ 0.02
SMARCC2-210ENST00000550519 PATE2Q6UY27 113 aa15.17■□□□□ 0.02
SMARCC2-210ENST00000550519 C6orf223Q8N319 242 aa15.17■□□□□ 0.02
SMARCC2-210ENST00000550519 C16orf74Q96GX8 76 aa15.17■□□□□ 0.02
SMARCC2-210ENST00000550519 SMIM8Q96KF7 97 aa15.17■□□□□ 0.02
SMARCC2-210ENST00000550519 TIMM8BQ9Y5J9 83 aaPredicted RBP15.17■□□□□ 0.02
SMARCC2-210ENST00000550519 K7EPK0 472 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms