RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 CDC42EP3Q9UKI2 254 aa16.33■□□□□ 0.21
PRDM4-205ENST00000550376 H3BRN7 92 aa16.33■□□□□ 0.2
PRDM4-205ENST00000550376 GNB4Q9HAV0 340 aa16.33■□□□□ 0.2
PRDM4-205ENST00000550376 MOB4Q9Y3A3 225 aa16.33■□□□□ 0.2
PRDM4-205ENST00000550376 TGFAP01135 160 aa16.33■□□□□ 0.2
PRDM4-205ENST00000550376 HIST1H1BP16401 226 aaKnown RBP16.33■□□□□ 0.2
PRDM4-205ENST00000550376 YPEL3P61236 119 aaPredicted RBP16.33■□□□□ 0.2
PRDM4-205ENST00000550376 RPL15P61313 204 aaKnown RBP16.33■□□□□ 0.2
PRDM4-205ENST00000550376 CLEC19AQ6UXS0 136 aa16.33■□□□□ 0.2
PRDM4-205ENST00000550376 FABP1P07148 127 aa16.32■□□□□ 0.2
PRDM4-205ENST00000550376 MEGF9Q9H1U4 602 aa16.32■□□□□ 0.2
PRDM4-205ENST00000550376 IGHV3OR16-13A0A075B7E8 117 aa16.32■□□□□ 0.2
PRDM4-205ENST00000550376 IGHV3-74A0A0B4J1X5 117 aa16.32■□□□□ 0.2
PRDM4-205ENST00000550376 IFITM10A6NMD0 228 aa16.32■□□□□ 0.2
PRDM4-205ENST00000550376 GCGP01275 180 aa16.32■□□□□ 0.2
PRDM4-205ENST00000550376 FOXL1Q12952 345 aa16.32■□□□□ 0.2
PRDM4-205ENST00000550376 OR8I2Q8N0Y5 310 aa16.32■□□□□ 0.2
PRDM4-205ENST00000550376 TRAV30A0A087WSZ9 112 aa16.31■□□□□ 0.2
PRDM4-205ENST00000550376 HIST1H1EP10412 219 aaKnown RBP16.31■□□□□ 0.2
PRDM4-205ENST00000550376 LY96Q9Y6Y9 160 aa16.31■□□□□ 0.2
PRDM4-205ENST00000550376 PRRC2AP48634 2157 aaKnown RBP16.31■□□□□ 0.2
PRDM4-205ENST00000550376 IGHV3-66A0A0C4DH42 116 aa16.31■□□□□ 0.2
PRDM4-205ENST00000550376 UBE2G1P62253 170 aa16.31■□□□□ 0.2
PRDM4-205ENST00000550376 IBA57Q5T440 356 aaKnown RBP16.31■□□□□ 0.2
PRDM4-205ENST00000550376 BPIFA4PQ86YQ2 179 aa16.31■□□□□ 0.2
PRDM4-205ENST00000550376 IL36BQ9NZH7 164 aa16.31■□□□□ 0.2
PRDM4-205ENST00000550376 A0A096LNT2 108 aa16.3■□□□□ 0.2
PRDM4-205ENST00000550376 ZNF502Q8TBZ5 544 aa16.3■□□□□ 0.2
PRDM4-205ENST00000550376 CCDC140Q96MF4 163 aa16.3■□□□□ 0.2
PRDM4-205ENST00000550376 M0R3E3 92 aa16.3■□□□□ 0.2
PRDM4-205ENST00000550376 S100A12P80511 92 aa16.3■□□□□ 0.2
PRDM4-205ENST00000550376 IGFL4Q6B9Z1 124 aa16.3■□□□□ 0.2
PRDM4-205ENST00000550376 LCNL1Q6ZST4 164 aa16.3■□□□□ 0.2
PRDM4-205ENST00000550376 ZNF414Q96IQ9 312 aa16.3■□□□□ 0.2
PRDM4-205ENST00000550376 TMEM68Q96MH6 324 aa16.3■□□□□ 0.2
PRDM4-205ENST00000550376 IGHV3-49A0A0A0MS15 119 aa16.29■□□□□ 0.2
PRDM4-205ENST00000550376 TCRAP04437 139 aa16.29■□□□□ 0.2
PRDM4-205ENST00000550376 GOLT1AQ6ZVE7 132 aa16.29■□□□□ 0.2
PRDM4-205ENST00000550376 IMMP2LQ96T52 175 aa16.29■□□□□ 0.2
PRDM4-205ENST00000550376 SONP18583 2426 aaKnown RBP16.29■□□□□ 0.2
PRDM4-205ENST00000550376 TRBV19A0A075B6N1 114 aa16.29■□□□□ 0.2
PRDM4-205ENST00000550376 TRAV41A0A0B4J266 112 aa16.29■□□□□ 0.2
PRDM4-205ENST00000550376 ZNF207O43670 478 aaKnown RBP16.29■□□□□ 0.2
PRDM4-205ENST00000550376 IGLC2P0DOY2 106 aa16.29■□□□□ 0.2
PRDM4-205ENST00000550376 DSCR9P59020 149 aa16.29■□□□□ 0.2
PRDM4-205ENST00000550376 TAS2R60P59551 318 aa16.29■□□□□ 0.2
PRDM4-205ENST00000550376 OR4F17Q8NGA8 305 aa16.29■□□□□ 0.2
PRDM4-205ENST00000550376 GPR61Q9BZJ8 451 aa16.29■□□□□ 0.2
PRDM4-205ENST00000550376 TMEM14CQ9P0S9 112 aa16.29■□□□□ 0.2
PRDM4-205ENST00000550376 TRBV9A0A0B4J1U6 114 aa16.28■□□□□ 0.2
PRDM4-205ENST00000550376 ZNF705GA8MUZ8 300 aaPredicted RBP16.28■□□□□ 0.2
PRDM4-205ENST00000550376 MRPS12O15235 138 aaKnown RBP16.28■□□□□ 0.2
PRDM4-205ENST00000550376 PAX1P15863 534 aa16.28■□□□□ 0.2
PRDM4-205ENST00000550376 SLC25A16P16260 332 aa16.28■□□□□ 0.2
PRDM4-205ENST00000550376 HOXA5P20719 270 aa16.28■□□□□ 0.2
PRDM4-205ENST00000550376 CBLN1P23435 193 aa16.28■□□□□ 0.2
PRDM4-205ENST00000550376 LINC00322Q6ZN03 302 aaPredicted RBP16.28■□□□□ 0.2
PRDM4-205ENST00000550376 C5orf17Q8NAS9 161 aa16.28■□□□□ 0.2
PRDM4-205ENST00000550376 ITPR2Q14571 2701 aa16.28■□□□□ 0.2
PRDM4-205ENST00000550376 TMEM183BQ1AE95 376 aa16.28■□□□□ 0.2
PRDM4-205ENST00000550376 RPEL1Q2QD12 228 aa16.28■□□□□ 0.2
PRDM4-205ENST00000550376 LINC01356Q8N9X3 169 aa16.28■□□□□ 0.2
PRDM4-205ENST00000550376 ATG101Q9BSB4 218 aa16.28■□□□□ 0.2
PRDM4-205ENST00000550376 LINC00587B1AMM8 73 aa16.27■□□□□ 0.2
PRDM4-205ENST00000550376 PRR31Q5SQ13 230 aa16.27■□□□□ 0.2
PRDM4-205ENST00000550376 TOMM20LQ6UXN7 152 aa16.27■□□□□ 0.2
PRDM4-205ENST00000550376 ZNF48Q96MX3 618 aaPredicted RBP16.27■□□□□ 0.2
PRDM4-205ENST00000550376 TRAPPC1Q9Y5R8 145 aa16.27■□□□□ 0.2
PRDM4-205ENST00000550376 KMT2BQ9UMN6 2715 aaPredicted RBP16.27■□□□□ 0.19
PRDM4-205ENST00000550376 CMTM2Q8TAZ6 248 aa16.27■□□□□ 0.19
PRDM4-205ENST00000550376 ITPR3Q14573 2671 aa16.27■□□□□ 0.19
PRDM4-205ENST00000550376 TYMSP04818 313 aa16.26■□□□□ 0.19
PRDM4-205ENST00000550376 ACTL10Q5JWF8 245 aa16.26■□□□□ 0.19
PRDM4-205ENST00000550376 NUDT10Q8NFP7 164 aa16.26■□□□□ 0.19
PRDM4-205ENST00000550376 NUDT11Q96G61 164 aa16.26■□□□□ 0.19
PRDM4-205ENST00000550376 A0A1B0GUS0 222 aa16.26■□□□□ 0.19
PRDM4-205ENST00000550376 A6NDX4 124 aa16.26■□□□□ 0.19
PRDM4-205ENST00000550376 DEFB112Q30KQ8 113 aa16.26■□□□□ 0.19
PRDM4-205ENST00000550376 SIGLEC15Q6ZMC9 328 aa16.26■□□□□ 0.19
PRDM4-205ENST00000550376 VN1R17PQ8TDU5 208 aa16.26■□□□□ 0.19
PRDM4-205ENST00000550376 OTORQ9NRC9 128 aa16.26■□□□□ 0.19
PRDM4-205ENST00000550376 OSTCQ9NRP0 149 aa16.26■□□□□ 0.19
PRDM4-205ENST00000550376 TRAV20A0A0B4J274 112 aa16.25■□□□□ 0.19
PRDM4-205ENST00000550376 IGHV4-59P01825 116 aa16.25■□□□□ 0.19
PRDM4-205ENST00000550376 IER3P46695 156 aa16.25■□□□□ 0.19
PRDM4-205ENST00000550376 TMEM95Q3KNT9 176 aa16.25■□□□□ 0.19
PRDM4-205ENST00000550376 PRNTQ86SH4 94 aa16.25■□□□□ 0.19
PRDM4-205ENST00000550376 CIARTQ8N365 385 aaPredicted RBP16.25■□□□□ 0.19
PRDM4-205ENST00000550376 KLF12Q9Y4X4 402 aa16.25■□□□□ 0.19
PRDM4-205ENST00000550376 APOHP02749 345 aaPredicted RBP16.24■□□□□ 0.19
PRDM4-205ENST00000550376 LINC00469Q8N7U9 141 aa16.24■□□□□ 0.19
PRDM4-205ENST00000550376 KLK15Q9H2R5 256 aa16.24■□□□□ 0.19
PRDM4-205ENST00000550376 TRBV12-3P01733 135 aa16.24■□□□□ 0.19
PRDM4-205ENST00000550376 TRGV3P03979 118 aa16.24■□□□□ 0.19
PRDM4-205ENST00000550376 CDX1P47902 265 aaPredicted RBP16.24■□□□□ 0.19
PRDM4-205ENST00000550376 MRPL54Q6P161 138 aaKnown RBP16.24■□□□□ 0.19
PRDM4-205ENST00000550376 GPR82Q96P67 336 aa16.24■□□□□ 0.19
PRDM4-205ENST00000550376 RABAC1Q9UI14 185 aa16.24■□□□□ 0.19
PRDM4-205ENST00000550376 SMAD5-AS1Q9Y6J3 95 aa16.24■□□□□ 0.19
PRDM4-205ENST00000550376 XKRY2A2RUG3 117 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms