RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 OR4B1Q8NGF8 309 aa5.42□□□□□ -1.54
NEK3-201ENST00000550331 TRGV9Q99603 122 aa5.42□□□□□ -1.54
NEK3-201ENST00000550331 MRPS26Q9BYN8 205 aaKnown RBP5.42□□□□□ -1.54
NEK3-201ENST00000550331 SLC35B3Q9H1N7 401 aa5.42□□□□□ -1.54
NEK3-201ENST00000550331 RSL24D1Q9UHA3 163 aaKnown RBP5.42□□□□□ -1.54
NEK3-201ENST00000550331 SLC45A2Q9UMX9 530 aa5.42□□□□□ -1.54
NEK3-201ENST00000550331 APOBP04114 4563 aaKnown RBP5.41□□□□□ -1.54
NEK3-201ENST00000550331 A0A0J9YX75 114 aa5.41□□□□□ -1.54
NEK3-201ENST00000550331 LOC102723971A0A1B0GUV8 181 aa5.41□□□□□ -1.54
NEK3-201ENST00000550331 A8MTW9 85 aa5.41□□□□□ -1.54
NEK3-201ENST00000550331 M0R2N4 97 aa5.41□□□□□ -1.54
NEK3-201ENST00000550331 PITX3O75364 302 aa5.41□□□□□ -1.54
NEK3-201ENST00000550331 SLC25A6P12236 298 aa5.41□□□□□ -1.54
NEK3-201ENST00000550331 GALR1P47211 349 aa5.41□□□□□ -1.54
NEK3-201ENST00000550331 RAB11AP62491 216 aa5.41□□□□□ -1.54
NEK3-201ENST00000550331 RRN3P1Q2M238 152 aa5.41□□□□□ -1.54
NEK3-201ENST00000550331 SOHLH1Q5JUK2 328 aa5.41□□□□□ -1.54
NEK3-201ENST00000550331 FAM78BQ5VT40 261 aa5.41□□□□□ -1.54
NEK3-201ENST00000550331 GGNBP1Q5YKI7 109 aa5.41□□□□□ -1.54
NEK3-201ENST00000550331 C1orf158Q8N1D5 194 aa5.41□□□□□ -1.54
NEK3-201ENST00000550331 THAP8Q8NA92 274 aa5.41□□□□□ -1.54
NEK3-201ENST00000550331 OR4D5Q8NGN0 318 aa5.41□□□□□ -1.54
NEK3-201ENST00000550331 OR1S1Q8NH92 325 aa5.41□□□□□ -1.54
NEK3-201ENST00000550331 SVIPQ8NHG7 77 aa5.41□□□□□ -1.54
NEK3-201ENST00000550331 DYNC2LI1Q8TCX1 351 aa5.41□□□□□ -1.54
NEK3-201ENST00000550331 RAB2BQ8WUD1 216 aa5.41□□□□□ -1.54
NEK3-201ENST00000550331 PPP1R14BQ96C90 147 aa5.41□□□□□ -1.54
NEK3-201ENST00000550331 BCL7BQ9BQE9 202 aa5.41□□□□□ -1.54
NEK3-201ENST00000550331 C7orf50Q9BRJ6 194 aaKnown RBP5.41□□□□□ -1.54
NEK3-201ENST00000550331 RPRMQ9NS64 109 aa5.41□□□□□ -1.54
NEK3-201ENST00000550331 MCUBQ9NWR8 336 aa5.41□□□□□ -1.54
NEK3-201ENST00000550331 DOK5Q9P104 306 aa5.41□□□□□ -1.54
NEK3-201ENST00000550331 YTHDF2Q9Y5A9 579 aaKnown RBP5.41□□□□□ -1.54
NEK3-201ENST00000550331 DNAH5Q8TE73 4624 aa5.4□□□□□ -1.54
NEK3-201ENST00000550331 IGKV1OR2-108A0A075B7D4 117 aa5.4□□□□□ -1.54
NEK3-201ENST00000550331 F6UB75 175 aa5.4□□□□□ -1.54
NEK3-201ENST00000550331 MED6O75586 246 aa5.4□□□□□ -1.54
NEK3-201ENST00000550331 S100A7P31151 101 aa5.4□□□□□ -1.54
NEK3-201ENST00000550331 FAUP35544 74 aaKnown RBP5.4□□□□□ -1.54
NEK3-201ENST00000550331 FAM3BP58499 235 aaPredicted RBP5.4□□□□□ -1.54
NEK3-201ENST00000550331 RPP30P78346 268 aaKnown RBP5.4□□□□□ -1.54
NEK3-201ENST00000550331 OR2F1Q13607 317 aa5.4□□□□□ -1.54
NEK3-201ENST00000550331 C21orf62-AS1Q17RA5 79 aa5.4□□□□□ -1.54
NEK3-201ENST00000550331 TMEM128Q5BJH2 165 aa5.4□□□□□ -1.54
NEK3-201ENST00000550331 AMTNQ6UX39 209 aa5.4□□□□□ -1.54
NEK3-201ENST00000550331 LRTM2Q8N967 370 aa5.4□□□□□ -1.54
NEK3-201ENST00000550331 C16orf92Q96LL3 132 aa5.4□□□□□ -1.54
NEK3-201ENST00000550331 IGF2BP2-AS1Q96M15 143 aa5.4□□□□□ -1.54
NEK3-201ENST00000550331 CIB3Q96Q77 187 aaPredicted RBP5.4□□□□□ -1.54
NEK3-201ENST00000550331 SOSTQ9BQB4 213 aa5.4□□□□□ -1.54
NEK3-201ENST00000550331 SLC25A32Q9H2D1 315 aa5.4□□□□□ -1.54
NEK3-201ENST00000550331 TMED3Q9Y3Q3 217 aa5.4□□□□□ -1.54
NEK3-201ENST00000550331 IGLV2-18A0A075B6J9 118 aa5.39□□□□□ -1.55
NEK3-201ENST00000550331 FABP12A6NFH5 140 aa5.39□□□□□ -1.55
NEK3-201ENST00000550331 ZNF98A6NK75 572 aa5.39□□□□□ -1.55
NEK3-201ENST00000550331 PRSS46E5RG02 174 aa5.39□□□□□ -1.55
NEK3-201ENST00000550331 DUSP14O95147 198 aaKnown RBP5.39□□□□□ -1.55
NEK3-201ENST00000550331 IAPPP10997 89 aa5.39□□□□□ -1.55
NEK3-201ENST00000550331 HTN3P15516 51 aa5.39□□□□□ -1.55
NEK3-201ENST00000550331 TMBIM6P55061 237 aa5.39□□□□□ -1.55
NEK3-201ENST00000550331 B2MP61769 119 aa5.39□□□□□ -1.55
NEK3-201ENST00000550331 DAD1P61803 113 aa5.39□□□□□ -1.55
NEK3-201ENST00000550331 TMEM88Q6PEY1 159 aa5.39□□□□□ -1.55
NEK3-201ENST00000550331 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.39□□□□□ -1.55
NEK3-201ENST00000550331 TMED4Q7Z7H5 227 aa5.39□□□□□ -1.55
NEK3-201ENST00000550331 MAPKAPK5-AS1Q8N8E1 139 aa5.39□□□□□ -1.55
NEK3-201ENST00000550331 C15orf53Q8NAA6 179 aa5.39□□□□□ -1.55
NEK3-201ENST00000550331 BPIFCQ8NFQ6 507 aa5.39□□□□□ -1.55
NEK3-201ENST00000550331 OR1B1Q8NGR6 318 aa5.39□□□□□ -1.55
NEK3-201ENST00000550331 DEDD2Q8WXF8 326 aa5.39□□□□□ -1.55
NEK3-201ENST00000550331 GPR82Q96P67 336 aa5.39□□□□□ -1.55
NEK3-201ENST00000550331 ARPC5LQ9BPX5 153 aa5.39□□□□□ -1.55
NEK3-201ENST00000550331 TMEM208Q9BTX3 173 aa5.39□□□□□ -1.55
NEK3-201ENST00000550331 TMEM147Q9BVK8 224 aa5.39□□□□□ -1.55
NEK3-201ENST00000550331 SLIRPQ9GZT3 109 aaKnown RBP5.39□□□□□ -1.55
NEK3-201ENST00000550331 MAGT1Q9H0U3 335 aa5.39□□□□□ -1.55
NEK3-201ENST00000550331 LYRM9A8MSI8 78 aa5.38□□□□□ -1.55
NEK3-201ENST00000550331 SYNGR2O43760 224 aa5.38□□□□□ -1.55
NEK3-201ENST00000550331 INSP01308 110 aa5.38□□□□□ -1.55
NEK3-201ENST00000550331 ORM2P19652 201 aa5.38□□□□□ -1.55
NEK3-201ENST00000550331 TSPOP30536 169 aa5.38□□□□□ -1.55
NEK3-201ENST00000550331 TNFSF8P32971 234 aa5.38□□□□□ -1.55
NEK3-201ENST00000550331 CNN1P51911 297 aaKnown RBP5.38□□□□□ -1.55
NEK3-201ENST00000550331 AP3S2P59780 193 aa5.38□□□□□ -1.55
NEK3-201ENST00000550331 C1orf134Q5TEV5 83 aa5.38□□□□□ -1.55
NEK3-201ENST00000550331 GSG1LQ6UXU4 331 aa5.38□□□□□ -1.55
NEK3-201ENST00000550331 OR11H7Q8NGC8 314 aa5.38□□□□□ -1.55
NEK3-201ENST00000550331 TRIM63Q969Q1 353 aa5.38□□□□□ -1.55
NEK3-201ENST00000550331 C17orf77Q96MU5 243 aa5.38□□□□□ -1.55
NEK3-201ENST00000550331 SLC25A21Q9BQT8 299 aaPredicted RBP5.38□□□□□ -1.55
NEK3-201ENST00000550331 RSG1Q9BU20 258 aa5.38□□□□□ -1.55
NEK3-201ENST00000550331 SLC25A22Q9H936 323 aa5.38□□□□□ -1.55
NEK3-201ENST00000550331 PAIP2BQ9ULR5 123 aaKnown RBP5.38□□□□□ -1.55
NEK3-201ENST00000550331 TRAV8-2A0A0B4J237 113 aa5.37□□□□□ -1.55
NEK3-201ENST00000550331 CRXO43186 299 aaPredicted RBP5.37□□□□□ -1.55
NEK3-201ENST00000550331 NOL3O60936 208 aaKnown RBP5.37□□□□□ -1.55
NEK3-201ENST00000550331 AKR1C1Q04828 323 aa5.37□□□□□ -1.55
NEK3-201ENST00000550331 SPINK13Q1W4C9 94 aa5.37□□□□□ -1.55
NEK3-201ENST00000550331 SPANXN5Q5MJ07 72 aa5.37□□□□□ -1.55
NEK3-201ENST00000550331 TMEM182Q6ZP80 229 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms