RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 DEFB135Q30KP9 77 aa4.88□□□□□ -1.63
TMEM116-208ENST00000549537 PRSS54Q6PEW0 395 aa4.88□□□□□ -1.63
TMEM116-208ENST00000549537 TCF24Q7RTU0 167 aa4.88□□□□□ -1.63
TMEM116-208ENST00000549537 LYZL2Q7Z4W2 148 aa4.88□□□□□ -1.63
TMEM116-208ENST00000549537 APRG1Q8IVJ8 170 aa4.88□□□□□ -1.63
TMEM116-208ENST00000549537 RNASE11Q8TAA1 199 aaKnown RBP4.88□□□□□ -1.63
TMEM116-208ENST00000549537 RNF183Q96D59 192 aa4.88□□□□□ -1.63
TMEM116-208ENST00000549537 ENY2Q9NPA8 101 aa4.88□□□□□ -1.63
TMEM116-208ENST00000549537 SCP2D1Q9UJQ7 156 aa4.88□□□□□ -1.63
TMEM116-208ENST00000549537 IGKV3-7A0A075B6H7 116 aa4.87□□□□□ -1.63
TMEM116-208ENST00000549537 TRAV2A0A0B4J234 112 aa4.87□□□□□ -1.63
TMEM116-208ENST00000549537 A0A0B4J2A0 478 aa4.87□□□□□ -1.63
TMEM116-208ENST00000549537 IGHV3-66A0A0C4DH42 116 aa4.87□□□□□ -1.63
TMEM116-208ENST00000549537 CXorf65A6NEN9 183 aa4.87□□□□□ -1.63
TMEM116-208ENST00000549537 PCP4L1A6NKN8 68 aa4.87□□□□□ -1.63
TMEM116-208ENST00000549537 PITX3O75364 302 aa4.87□□□□□ -1.63
TMEM116-208ENST00000549537 SULT1A3P0DMM9 295 aa4.87□□□□□ -1.63
TMEM116-208ENST00000549537 SULT1A4P0DMN0 295 aa4.87□□□□□ -1.63
TMEM116-208ENST00000549537 AKR1C4P17516 323 aa4.87□□□□□ -1.63
TMEM116-208ENST00000549537 RPL35AP18077 110 aaKnown RBP4.87□□□□□ -1.63
TMEM116-208ENST00000549537 TFPI2P48307 235 aa4.87□□□□□ -1.63
TMEM116-208ENST00000549537 TIGITQ495A1 244 aa4.87□□□□□ -1.63
TMEM116-208ENST00000549537 CD164L2Q6UWJ8 174 aa4.87□□□□□ -1.63
TMEM116-208ENST00000549537 LYG2Q86SG7 212 aa4.87□□□□□ -1.63
TMEM116-208ENST00000549537 GBGT1Q8N5D6 347 aa4.87□□□□□ -1.63
TMEM116-208ENST00000549537 FAM24BQ8N5W8 94 aa4.87□□□□□ -1.63
TMEM116-208ENST00000549537 ZNF680Q8NEM1 530 aa4.87□□□□□ -1.63
TMEM116-208ENST00000549537 IL17DQ8TAD2 202 aa4.87□□□□□ -1.63
TMEM116-208ENST00000549537 LRRC20Q8TCA0 184 aa4.87□□□□□ -1.63
TMEM116-208ENST00000549537 RNASEH2CQ8TDP1 164 aaKnown RBP4.87□□□□□ -1.63
TMEM116-208ENST00000549537 SCGB3A2Q96PL1 93 aa4.87□□□□□ -1.63
TMEM116-208ENST00000549537 MFFQ9GZY8 342 aa4.87□□□□□ -1.63
TMEM116-208ENST00000549537 MS4A6AQ9H2W1 248 aa4.87□□□□□ -1.63
TMEM116-208ENST00000549537 MCUBQ9NWR8 336 aa4.87□□□□□ -1.63
TMEM116-208ENST00000549537 SHPKQ9UHJ6 478 aa4.87□□□□□ -1.63
TMEM116-208ENST00000549537 KCNIP3Q9Y2W7 256 aa4.87□□□□□ -1.63
TMEM116-208ENST00000549537 FAT2Q9NYQ8 4349 aa4.86□□□□□ -1.63
TMEM116-208ENST00000549537 DNAH17Q9UFH2 4485 aa4.86□□□□□ -1.63
TMEM116-208ENST00000549537 TRAV30A0A087WSZ9 112 aa4.86□□□□□ -1.63
TMEM116-208ENST00000549537 A0A0J9YWU9 116 aa4.86□□□□□ -1.63
TMEM116-208ENST00000549537 RPS10-NUDT3A0A1W2PQS6 291 aa4.86□□□□□ -1.63
TMEM116-208ENST00000549537 CEBPZOSA8MTT3 80 aa4.86□□□□□ -1.63
TMEM116-208ENST00000549537 K7EQG2 157 aa4.86□□□□□ -1.63
TMEM116-208ENST00000549537 GIG44P09565 113 aaPredicted RBP4.86□□□□□ -1.63
TMEM116-208ENST00000549537 SLC25A4P12235 298 aa4.86□□□□□ -1.63
TMEM116-208ENST00000549537 NPPCP23582 126 aa4.86□□□□□ -1.63
TMEM116-208ENST00000549537 NPY1RP25929 384 aa4.86□□□□□ -1.63
TMEM116-208ENST00000549537 P2RY1P47900 373 aa4.86□□□□□ -1.63
TMEM116-208ENST00000549537 CCR6P51684 374 aa4.86□□□□□ -1.63
TMEM116-208ENST00000549537 RND2P52198 227 aa4.86□□□□□ -1.63
TMEM116-208ENST00000549537 CMC4P56277 68 aaPredicted RBP4.86□□□□□ -1.63
TMEM116-208ENST00000549537 YPEL3P61236 119 aaPredicted RBP4.86□□□□□ -1.63
TMEM116-208ENST00000549537 SMCO1Q147U7 214 aa4.86□□□□□ -1.63
TMEM116-208ENST00000549537 RBMS2Q15434 407 aaKnown RBP4.86□□□□□ -1.63
TMEM116-208ENST00000549537 ANXA2RQ3ZCQ2 193 aa4.86□□□□□ -1.63
TMEM116-208ENST00000549537 PYDC2Q56P42 97 aa4.86□□□□□ -1.63
TMEM116-208ENST00000549537 FAM122CQ6P4D5 195 aa4.86□□□□□ -1.63
TMEM116-208ENST00000549537 ZNF575Q86XF7 245 aa4.86□□□□□ -1.63
TMEM116-208ENST00000549537 LGI3Q8N145 548 aa4.86□□□□□ -1.63
TMEM116-208ENST00000549537 LRTM2Q8N967 370 aa4.86□□□□□ -1.63
TMEM116-208ENST00000549537 OR1S2Q8NGQ3 325 aa4.86□□□□□ -1.63
TMEM116-208ENST00000549537 DTD1Q8TEA8 209 aa4.86□□□□□ -1.63
TMEM116-208ENST00000549537 DCANP1Q8TF63 244 aa4.86□□□□□ -1.63
TMEM116-208ENST00000549537 DEDD2Q8WXF8 326 aa4.86□□□□□ -1.63
TMEM116-208ENST00000549537 CSTL1Q9H114 145 aa4.86□□□□□ -1.63
TMEM116-208ENST00000549537 RBKSQ9H477 322 aa4.86□□□□□ -1.63
TMEM116-208ENST00000549537 CACFD1Q9UGQ2 172 aa4.86□□□□□ -1.63
TMEM116-208ENST00000549537 IGKV1D-37A0A075B6S9 117 aa4.85□□□□□ -1.63
TMEM116-208ENST00000549537 DUXBA0A1W2PPF3 345 aa4.85□□□□□ -1.63
TMEM116-208ENST00000549537 A0A1W2PS18 150 aa4.85□□□□□ -1.63
TMEM116-208ENST00000549537 MPTX1A8MV57 137 aa4.85□□□□□ -1.63
TMEM116-208ENST00000549537 TOMM40O96008 361 aa4.85□□□□□ -1.63
TMEM116-208ENST00000549537 SLC25A6P12236 298 aa4.85□□□□□ -1.63
TMEM116-208ENST00000549537 ANXA3P12429 323 aa4.85□□□□□ -1.63
TMEM116-208ENST00000549537 OR10J1P30954 320 aa4.85□□□□□ -1.63
TMEM116-208ENST00000549537 FAUP35544 74 aaKnown RBP4.85□□□□□ -1.63
TMEM116-208ENST00000549537 AP3S2P59780 193 aa4.85□□□□□ -1.63
TMEM116-208ENST00000549537 DEFB131AP59861 70 aa4.85□□□□□ -1.63
TMEM116-208ENST00000549537 RAB14P61106 215 aa4.85□□□□□ -1.63
TMEM116-208ENST00000549537 RAB11AP62491 216 aa4.85□□□□□ -1.63
TMEM116-208ENST00000549537 PAFAH1B2P68402 229 aa4.85□□□□□ -1.63
TMEM116-208ENST00000549537 SRPXP78539 464 aa4.85□□□□□ -1.63
TMEM116-208ENST00000549537 USF2Q15853 346 aaPredicted RBP4.85□□□□□ -1.63
TMEM116-208ENST00000549537 TMEM128Q5BJH2 165 aa4.85□□□□□ -1.63
TMEM116-208ENST00000549537 LEMD1Q68G75 181 aa4.85□□□□□ -1.63
TMEM116-208ENST00000549537 RNASEKQ6P5S7 137 aaKnown RBP4.85□□□□□ -1.63
TMEM116-208ENST00000549537 TOMM5Q8N4H5 51 aa4.85□□□□□ -1.63
TMEM116-208ENST00000549537 MRPL53Q96EL3 112 aaKnown RBP4.85□□□□□ -1.63
TMEM116-208ENST00000549537 GRAMD2BQ96HH9 432 aa4.85□□□□□ -1.63
TMEM116-208ENST00000549537 METTL26Q96S19 204 aa4.85□□□□□ -1.63
TMEM116-208ENST00000549537 SDHCQ99643 169 aaPredicted RBP4.85□□□□□ -1.63
TMEM116-208ENST00000549537 SRRQ9GZT4 340 aa4.85□□□□□ -1.63
TMEM116-208ENST00000549537 PTTG2Q9NZH5 202 aa4.85□□□□□ -1.63
TMEM116-208ENST00000549537 U3KQ87 197 aa4.85□□□□□ -1.63
TMEM116-208ENST00000549537 GAGE12BA1L429 117 aa4.84□□□□□ -1.63
TMEM116-208ENST00000549537 RNF222A6NCQ9 220 aa4.84□□□□□ -1.63
TMEM116-208ENST00000549537 GAGE12HA6NDE8 117 aa4.84□□□□□ -1.63
TMEM116-208ENST00000549537 DNASE2O00115 360 aaPredicted RBP4.84□□□□□ -1.63
TMEM116-208ENST00000549537 SFT2D2O95562 160 aa4.84□□□□□ -1.63
TMEM116-208ENST00000549537 IFNA10P01566 189 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms