RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 ACY3Q96HD9 319 aa6.07□□□□□ -1.44
TROAP-208ENST00000548817 LINC00052Q96N35 136 aa6.07□□□□□ -1.44
TROAP-208ENST00000548817 NEU1Q99519 415 aa6.07□□□□□ -1.44
TROAP-208ENST00000548817 SEC22CQ9BRL7 303 aa6.07□□□□□ -1.44
TROAP-208ENST00000548817 TMEM222Q9H0R3 208 aa6.07□□□□□ -1.44
TROAP-208ENST00000548817 FLVCR2Q9UPI3 526 aa6.07□□□□□ -1.44
TROAP-208ENST00000548817 HLA-DRB4X5D2U9 266 aa6.07□□□□□ -1.44
TROAP-208ENST00000548817 FLG2Q5D862 2391 aaPredicted RBP6.07□□□□□ -1.44
TROAP-208ENST00000548817 KANTRA0A1W2PQU2 76 aa6.06□□□□□ -1.44
TROAP-208ENST00000548817 KRBOX1C9JBD0 128 aa6.06□□□□□ -1.44
TROAP-208ENST00000548817 GOSR2O14653 212 aa6.06□□□□□ -1.44
TROAP-208ENST00000548817 CDS2O95674 445 aa6.06□□□□□ -1.44
TROAP-208ENST00000548817 TOMM40O96008 361 aa6.06□□□□□ -1.44
TROAP-208ENST00000548817 IGKV3-20P01619 116 aa6.06□□□□□ -1.44
TROAP-208ENST00000548817 OR4E1P0C645 316 aa6.06□□□□□ -1.44
TROAP-208ENST00000548817 HTN3P15516 51 aa6.06□□□□□ -1.44
TROAP-208ENST00000548817 EIF5AP63241 154 aaKnown RBP6.06□□□□□ -1.44
TROAP-208ENST00000548817 TMEM268Q5VZI3 342 aa6.06□□□□□ -1.44
TROAP-208ENST00000548817 SPATA31B1PQ5VZV4 182 aa6.06□□□□□ -1.44
TROAP-208ENST00000548817 EBLN2Q6P2I7 272 aa6.06□□□□□ -1.44
TROAP-208ENST00000548817 TMUB2Q71RG4 321 aa6.06□□□□□ -1.44
TROAP-208ENST00000548817 COMMD7Q86VX2 200 aa6.06□□□□□ -1.44
TROAP-208ENST00000548817 INO80EQ8NBZ0 244 aaPredicted RBP6.06□□□□□ -1.44
TROAP-208ENST00000548817 OR4B1Q8NGF8 309 aa6.06□□□□□ -1.44
TROAP-208ENST00000548817 OR51G1Q8NGK1 321 aa6.06□□□□□ -1.44
TROAP-208ENST00000548817 COQ8AQ8NI60 647 aa6.06□□□□□ -1.44
TROAP-208ENST00000548817 THAP6Q8TBB0 222 aa6.06□□□□□ -1.44
TROAP-208ENST00000548817 SUN5Q8TC36 379 aa6.06□□□□□ -1.44
TROAP-208ENST00000548817 RBPMSQ93062 196 aaKnown RBP6.06□□□□□ -1.44
TROAP-208ENST00000548817 PHYHIPLQ96FC7 376 aa6.06□□□□□ -1.44
TROAP-208ENST00000548817 PBDC1Q9BVG4 233 aa6.06□□□□□ -1.44
TROAP-208ENST00000548817 CACNG5Q9UF02 275 aa6.06□□□□□ -1.44
TROAP-208ENST00000548817 KCNIP3Q9Y2W7 256 aa6.06□□□□□ -1.44
TROAP-208ENST00000548817 GOLT1BQ9Y3E0 138 aa6.06□□□□□ -1.44
TROAP-208ENST00000548817 IGLV2-18A0A075B6J9 118 aa6.05□□□□□ -1.44
TROAP-208ENST00000548817 FXYD6-FXYD2A0A087WZ82 144 aa6.05□□□□□ -1.44
TROAP-208ENST00000548817 A0A0B4J2A0 478 aa6.05□□□□□ -1.44
TROAP-208ENST00000548817 A0A0G2JRQ6 117 aa6.05□□□□□ -1.44
TROAP-208ENST00000548817 ZFP92A6NM28 416 aa6.05□□□□□ -1.44
TROAP-208ENST00000548817 BUB3O43684 328 aa6.05□□□□□ -1.44
TROAP-208ENST00000548817 HBE1P02100 147 aa6.05□□□□□ -1.44
TROAP-208ENST00000548817 OR5AC1P0C628 307 aa6.05□□□□□ -1.44
TROAP-208ENST00000548817 PET100P0DJ07 73 aa6.05□□□□□ -1.44
TROAP-208ENST00000548817 PSG1P11464 419 aa6.05□□□□□ -1.44
TROAP-208ENST00000548817 FXYD7P58549 80 aa6.05□□□□□ -1.44
TROAP-208ENST00000548817 TNP2Q05952 138 aa6.05□□□□□ -1.44
TROAP-208ENST00000548817 ZNF345Q14585 488 aa6.05□□□□□ -1.44
TROAP-208ENST00000548817 USF2Q15853 346 aaPredicted RBP6.05□□□□□ -1.44
TROAP-208ENST00000548817 RNF212Q495C1 297 aa6.05□□□□□ -1.44
TROAP-208ENST00000548817 GSG1LQ6UXU4 331 aa6.05□□□□□ -1.44
TROAP-208ENST00000548817 FOXI2Q6ZQN5 318 aa6.05□□□□□ -1.44
TROAP-208ENST00000548817 ZNF546Q86UE3 836 aa6.05□□□□□ -1.44
TROAP-208ENST00000548817 SELENOHQ8IZQ5 122 aaKnown RBP6.05□□□□□ -1.44
TROAP-208ENST00000548817 OR11H4Q8NGC9 324 aa6.05□□□□□ -1.44
TROAP-208ENST00000548817 GPR146Q96CH1 333 aa6.05□□□□□ -1.44
TROAP-208ENST00000548817 RNF125Q96EQ8 232 aa6.05□□□□□ -1.44
TROAP-208ENST00000548817 SLC35E1Q96K37 410 aa6.05□□□□□ -1.44
TROAP-208ENST00000548817 NIPSNAP3BQ9BS92 247 aa6.05□□□□□ -1.44
TROAP-208ENST00000548817 TMEM208Q9BTX3 173 aa6.05□□□□□ -1.44
TROAP-208ENST00000548817 ARL6Q9H0F7 186 aa6.05□□□□□ -1.44
TROAP-208ENST00000548817 SLC25A32Q9H2D1 315 aa6.05□□□□□ -1.44
TROAP-208ENST00000548817 NAA60Q9H7X0 242 aa6.05□□□□□ -1.44
TROAP-208ENST00000548817 SHPKQ9UHJ6 478 aa6.05□□□□□ -1.44
TROAP-208ENST00000548817 TMED3Q9Y3Q3 217 aa6.05□□□□□ -1.44
TROAP-208ENST00000548817 PIGBOS1A0A0B4J2F0 54 aa6.04□□□□□ -1.44
TROAP-208ENST00000548817 PSMB3P49720 205 aa6.04□□□□□ -1.44
TROAP-208ENST00000548817 ATP5IP56385 69 aaPredicted RBP6.04□□□□□ -1.44
TROAP-208ENST00000548817 DAD1P61803 113 aa6.04□□□□□ -1.44
TROAP-208ENST00000548817 PSG9Q00887 426 aa6.04□□□□□ -1.44
TROAP-208ENST00000548817 SURF2Q15527 256 aaPredicted RBP6.04□□□□□ -1.44
TROAP-208ENST00000548817 RRN3P1Q2M238 152 aa6.04□□□□□ -1.44
TROAP-208ENST00000548817 AARDQ4LEZ3 155 aa6.04□□□□□ -1.44
TROAP-208ENST00000548817 FAM222AQ5U5X8 452 aa6.04□□□□□ -1.44
TROAP-208ENST00000548817 SAMD13Q5VXD3 122 aa6.04□□□□□ -1.44
TROAP-208ENST00000548817 OR8G2PQ6IF36 304 aa6.04□□□□□ -1.44
TROAP-208ENST00000548817 EIF5AL1Q6IS14 154 aaKnown RBP6.04□□□□□ -1.44
TROAP-208ENST00000548817 ZNF705AQ6ZN79 300 aaPredicted RBP6.04□□□□□ -1.44
TROAP-208ENST00000548817 TMED4Q7Z7H5 227 aa6.04□□□□□ -1.44
TROAP-208ENST00000548817 OR8I2Q8N0Y5 310 aa6.04□□□□□ -1.44
TROAP-208ENST00000548817 LGI3Q8N145 548 aa6.04□□□□□ -1.44
TROAP-208ENST00000548817 OR4D10Q8NGI6 311 aa6.04□□□□□ -1.44
TROAP-208ENST00000548817 GLYATL2Q8WU03 294 aa6.04□□□□□ -1.44
TROAP-208ENST00000548817 ATG101Q9BSB4 218 aa6.04□□□□□ -1.44
TROAP-208ENST00000548817 MAGT1Q9H0U3 335 aa6.04□□□□□ -1.44
TROAP-208ENST00000548817 SAV1Q9H4B6 383 aaPredicted RBP6.04□□□□□ -1.44
TROAP-208ENST00000548817 LOC102723971A0A1B0GUV8 181 aa6.03□□□□□ -1.44
TROAP-208ENST00000548817 ZNF705FA8MVS1 300 aaPredicted RBP6.03□□□□□ -1.44
TROAP-208ENST00000548817 ARPC5O15511 151 aa6.03□□□□□ -1.44
TROAP-208ENST00000548817 NXPH3O95157 252 aa6.03□□□□□ -1.44
TROAP-208ENST00000548817 ZNF705DP0CH99 300 aaPredicted RBP6.03□□□□□ -1.44
TROAP-208ENST00000548817 ZNF705BP0CI00 300 aaPredicted RBP6.03□□□□□ -1.44
TROAP-208ENST00000548817 S100A7P31151 101 aa6.03□□□□□ -1.44
TROAP-208ENST00000548817 GPX4P36969 197 aaPredicted RBP6.03□□□□□ -1.44
TROAP-208ENST00000548817 LYZP61626 148 aa6.03□□□□□ -1.44
TROAP-208ENST00000548817 SUPT4H1P63272 117 aaKnown RBP6.03□□□□□ -1.44
TROAP-208ENST00000548817 TMEM128Q5BJH2 165 aa6.03□□□□□ -1.44
TROAP-208ENST00000548817 NMSQ5H8A3 153 aa6.03□□□□□ -1.44
TROAP-208ENST00000548817 C1orf194Q5T5A4 169 aa6.03□□□□□ -1.44
TROAP-208ENST00000548817 ACOT7LQ6ZUV0 252 aa6.03□□□□□ -1.44
TROAP-208ENST00000548817 KCNRGQ8N5I3 272 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms