RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 NPVFQ9HCQ7 196 aa10.12□□□□□ -0.79
PTCH1-217ENST00000548420 RPL35AP18077 110 aaKnown RBP10.11□□□□□ -0.79
PTCH1-217ENST00000548420 GATA2P23769 480 aaPredicted RBP10.11□□□□□ -0.79
PTCH1-217ENST00000548420 PLP1P60201 277 aa10.11□□□□□ -0.79
PTCH1-217ENST00000548420 LYZP61626 148 aa10.11□□□□□ -0.79
PTCH1-217ENST00000548420 AKR1C1Q04828 323 aa10.11□□□□□ -0.79
PTCH1-217ENST00000548420 CYP2G1PQ6ZSU1 146 aa10.11□□□□□ -0.79
PTCH1-217ENST00000548420 BPIFCQ8NFQ6 507 aa10.11□□□□□ -0.79
PTCH1-217ENST00000548420 CSTL1Q9H114 145 aa10.11□□□□□ -0.79
PTCH1-217ENST00000548420 GPN1Q9HCN4 374 aaPredicted RBP10.11□□□□□ -0.79
PTCH1-217ENST00000548420 NRN1Q9NPD7 142 aa10.11□□□□□ -0.79
PTCH1-217ENST00000548420 ZNF688P0C7X2 276 aa10.1□□□□□ -0.79
PTCH1-217ENST00000548420 DEFA1P59665 94 aa10.1□□□□□ -0.79
PTCH1-217ENST00000548420 DEFA3P59666 94 aa10.1□□□□□ -0.79
PTCH1-217ENST00000548420 SELENOTP62341 195 aa10.1□□□□□ -0.79
PTCH1-217ENST00000548420 RAB32Q13637 225 aa10.1□□□□□ -0.79
PTCH1-217ENST00000548420 LEMD1Q68G75 181 aa10.1□□□□□ -0.79
PTCH1-217ENST00000548420 LSM5Q9Y4Y9 91 aaKnown RBP10.1□□□□□ -0.79
PTCH1-217ENST00000548420 ZNF98A6NK75 572 aa10.09□□□□□ -0.79
PTCH1-217ENST00000548420 L7N2F9 121 aa10.09□□□□□ -0.79
PTCH1-217ENST00000548420 RRAS2P62070 204 aaPredicted RBP10.09□□□□□ -0.79
PTCH1-217ENST00000548420 VAMP2P63027 116 aa10.09□□□□□ -0.79
PTCH1-217ENST00000548420 TEPPQ6URK8 271 aa10.09□□□□□ -0.79
PTCH1-217ENST00000548420 TRPT1Q86TN4 253 aaKnown RBP10.09□□□□□ -0.79
PTCH1-217ENST00000548420 C17orf77Q96MU5 243 aa10.09□□□□□ -0.79
PTCH1-217ENST00000548420 MFFQ9GZY8 342 aa10.09□□□□□ -0.79
PTCH1-217ENST00000548420 IGLV2-18A0A075B6J9 118 aa10.08□□□□□ -0.8
PTCH1-217ENST00000548420 SMCO3A2RU48 225 aa10.08□□□□□ -0.8
PTCH1-217ENST00000548420 SOCS3O14543 225 aa10.08□□□□□ -0.8
PTCH1-217ENST00000548420 GIG44P09565 113 aaPredicted RBP10.08□□□□□ -0.8
PTCH1-217ENST00000548420 ORM2P19652 201 aa10.08□□□□□ -0.8
PTCH1-217ENST00000548420 NMES1Q9C002 83 aa10.08□□□□□ -0.8
PTCH1-217ENST00000548420 LYRM2Q9NU23 88 aaPredicted RBP10.08□□□□□ -0.8
PTCH1-217ENST00000548420 MGAT4CQ9UBM8 478 aa10.08□□□□□ -0.8
PTCH1-217ENST00000548420 IGHV4-4A0A075B6R2 117 aa10.07□□□□□ -0.8
PTCH1-217ENST00000548420 FAM24AA6NFZ4 105 aa10.07□□□□□ -0.8
PTCH1-217ENST00000548420 SIX6O95475 246 aa10.07□□□□□ -0.8
PTCH1-217ENST00000548420 PVALBP20472 110 aaPredicted RBP10.07□□□□□ -0.8
PTCH1-217ENST00000548420 SNRPD3P62318 126 aaKnown RBP10.07□□□□□ -0.8
PTCH1-217ENST00000548420 VWC2Q2TAL6 325 aa10.07□□□□□ -0.8
PTCH1-217ENST00000548420 STHQ8IWL8 128 aa10.07□□□□□ -0.8
PTCH1-217ENST00000548420 OR8I2Q8N0Y5 310 aa10.07□□□□□ -0.8
PTCH1-217ENST00000548420 TMEM252Q8N6L7 170 aa10.07□□□□□ -0.8
PTCH1-217ENST00000548420 KNCNA6PVL3 124 aa10.06□□□□□ -0.8
PTCH1-217ENST00000548420 HYPMO75409 117 aa10.06□□□□□ -0.8
PTCH1-217ENST00000548420 CST7O76096 145 aa10.06□□□□□ -0.8
PTCH1-217ENST00000548420 S100A7P31151 101 aa10.06□□□□□ -0.8
PTCH1-217ENST00000548420 SULT1A1P50225 295 aa10.06□□□□□ -0.8
PTCH1-217ENST00000548420 CAV2P51636 162 aa10.06□□□□□ -0.8
PTCH1-217ENST00000548420 SLC38A11Q08AI6 406 aa10.06□□□□□ -0.8
PTCH1-217ENST00000548420 PSMG4Q5JS54 123 aa10.06□□□□□ -0.8
PTCH1-217ENST00000548420 PXDC1Q5TGL8 231 aa10.06□□□□□ -0.8
PTCH1-217ENST00000548420 PATE2Q6UY27 113 aa10.06□□□□□ -0.8
PTCH1-217ENST00000548420 OR1B1Q8NGR6 318 aa10.06□□□□□ -0.8
PTCH1-217ENST00000548420 PPP1R14BQ96C90 147 aa10.06□□□□□ -0.8
PTCH1-217ENST00000548420 GPR82Q96P67 336 aa10.06□□□□□ -0.8
PTCH1-217ENST00000548420 SHANK2-AS3Q9BTD1 123 aa10.06□□□□□ -0.8
PTCH1-217ENST00000548420 TMEM147Q9BVK8 224 aa10.06□□□□□ -0.8
PTCH1-217ENST00000548420 SLC25A39Q9BZJ4 359 aaPredicted RBP10.06□□□□□ -0.8
PTCH1-217ENST00000548420 SLC25A32Q9H2D1 315 aa10.06□□□□□ -0.8
PTCH1-217ENST00000548420 IGSF23A1L1A6 192 aa10.05□□□□□ -0.8
PTCH1-217ENST00000548420 H0YIZ8 118 aa10.05□□□□□ -0.8
PTCH1-217ENST00000548420 H3BMM0 161 aa10.05□□□□□ -0.8
PTCH1-217ENST00000548420 H3BRN7 92 aa10.05□□□□□ -0.8
PTCH1-217ENST00000548420 GOSR2O14653 212 aa10.05□□□□□ -0.8
PTCH1-217ENST00000548420 AGPAT2O15120 278 aa10.05□□□□□ -0.8
PTCH1-217ENST00000548420 LINC00869P0C866 280 aa10.05□□□□□ -0.8
PTCH1-217ENST00000548420 SPP1P10451 314 aa10.05□□□□□ -0.8
PTCH1-217ENST00000548420 S100A11P31949 105 aa10.05□□□□□ -0.8
PTCH1-217ENST00000548420 PSMB3P49720 205 aa10.05□□□□□ -0.8
PTCH1-217ENST00000548420 BCAP31P51572 246 aa10.05□□□□□ -0.8
PTCH1-217ENST00000548420 H2BFSP57053 126 aa10.05□□□□□ -0.8
PTCH1-217ENST00000548420 S100A10P60903 97 aa10.05□□□□□ -0.8
PTCH1-217ENST00000548420 CYCSP99999 105 aaKnown RBP10.05□□□□□ -0.8
PTCH1-217ENST00000548420 MORN3Q6PF18 240 aaPredicted RBP10.05□□□□□ -0.8
PTCH1-217ENST00000548420 CHAC2Q8WUX2 184 aa10.05□□□□□ -0.8
PTCH1-217ENST00000548420 MGST2Q99735 147 aa10.05□□□□□ -0.8
PTCH1-217ENST00000548420 HIGD1AQ9Y241 93 aa10.05□□□□□ -0.8
PTCH1-217ENST00000548420 WDR83OSQ9Y284 106 aa10.05□□□□□ -0.8
PTCH1-217ENST00000548420 RNF213Q63HN8 5207 aa10.05□□□□□ -0.8
PTCH1-217ENST00000548420 J3QL48 77 aa10.04□□□□□ -0.8
PTCH1-217ENST00000548420 ISLRO14498 428 aa10.04□□□□□ -0.8
PTCH1-217ENST00000548420 DEFB4AO15263 64 aa10.04□□□□□ -0.8
PTCH1-217ENST00000548420 CA1P00915 261 aaPredicted RBP10.04□□□□□ -0.8
PTCH1-217ENST00000548420 ID1P41134 155 aa10.04□□□□□ -0.8
PTCH1-217ENST00000548420 GALR1P47211 349 aa10.04□□□□□ -0.8
PTCH1-217ENST00000548420 MEOX2P50222 304 aa10.04□□□□□ -0.8
PTCH1-217ENST00000548420 ATP6V1FQ16864 119 aa10.04□□□□□ -0.8
PTCH1-217ENST00000548420 TMEM41BQ5BJD5 291 aa10.04□□□□□ -0.8
PTCH1-217ENST00000548420 ACTL10Q5JWF8 245 aa10.04□□□□□ -0.8
PTCH1-217ENST00000548420 SAMD13Q5VXD3 122 aa10.04□□□□□ -0.8
PTCH1-217ENST00000548420 ZNF546Q86UE3 836 aa10.04□□□□□ -0.8
PTCH1-217ENST00000548420 CLUHP3Q96NS8 147 aa10.04□□□□□ -0.8
PTCH1-217ENST00000548420 SCRT1Q9BWW7 348 aa10.04□□□□□ -0.8
PTCH1-217ENST00000548420 UQCC1Q9NVA1 299 aa10.04□□□□□ -0.8
PTCH1-217ENST00000548420 E5RGE8 158 aa10.03□□□□□ -0.8
PTCH1-217ENST00000548420 RLN2P04090 185 aa10.03□□□□□ -0.8
PTCH1-217ENST00000548420 HLA-DRB4P13762 266 aa10.03□□□□□ -0.8
PTCH1-217ENST00000548420 RAP2BP61225 183 aa10.03□□□□□ -0.8
PTCH1-217ENST00000548420 C1orf134Q5TEV5 83 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms