RNA–Protein interactions for RNA: ENST00000547430.2

HIF1A-205, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-205ENST00000547430 GAFA1Q96PS6 74 aa4.11□□□□□ -1.75
HIF1A-205ENST00000547430 ZNF2Q9BSG1 426 aaPredicted RBP4.11□□□□□ -1.75
HIF1A-205ENST00000547430 ALG5Q9Y673 324 aa4.11□□□□□ -1.75
HIF1A-205ENST00000547430 MYO18BQ8IUG5 2567 aa4.11□□□□□ -1.75
HIF1A-205ENST00000547430 ARFGEF3Q5TH69 2177 aa4.11□□□□□ -1.75
HIF1A-205ENST00000547430 KMT2BQ9UMN6 2715 aaPredicted RBP4.11□□□□□ -1.75
HIF1A-205ENST00000547430 USP9XQ93008 2570 aaPredicted RBP4.1□□□□□ -1.75
HIF1A-205ENST00000547430 SPTAN1Q13813 2472 aaKnown RBP4.1□□□□□ -1.75
HIF1A-205ENST00000547430 ODAMA1E959 279 aa4.1□□□□□ -1.75
HIF1A-205ENST00000547430 C7orf66A4D0T2 115 aa4.1□□□□□ -1.75
HIF1A-205ENST00000547430 OR5H14A6NHG9 310 aa4.1□□□□□ -1.75
HIF1A-205ENST00000547430 J3QKU1 62 aa4.1□□□□□ -1.75
HIF1A-205ENST00000547430 LY6HO94772 140 aa4.1□□□□□ -1.75
HIF1A-205ENST00000547430 IL5P05113 134 aa4.1□□□□□ -1.75
HIF1A-205ENST00000547430 CTXN2P0C2S0 81 aa4.1□□□□□ -1.75
HIF1A-205ENST00000547430 COX6B1P14854 86 aa4.1□□□□□ -1.75
HIF1A-205ENST00000547430 NFYAP23511 347 aaPredicted RBP4.1□□□□□ -1.75
HIF1A-205ENST00000547430 NPY1RP25929 384 aa4.1□□□□□ -1.75
HIF1A-205ENST00000547430 EDDM3BP56851 147 aa4.1□□□□□ -1.75
HIF1A-205ENST00000547430 HMGN3Q15651 99 aa4.1□□□□□ -1.75
HIF1A-205ENST00000547430 ACTL10Q5JWF8 245 aa4.1□□□□□ -1.75
HIF1A-205ENST00000547430 AADACL3Q5VUY0 350 aa4.1□□□□□ -1.75
HIF1A-205ENST00000547430 ZNF660Q6AZW8 331 aaPredicted RBP4.1□□□□□ -1.75
HIF1A-205ENST00000547430 SLC36A1Q7Z2H8 476 aa4.1□□□□□ -1.75
HIF1A-205ENST00000547430 TMED4Q7Z7H5 227 aa4.1□□□□□ -1.75
HIF1A-205ENST00000547430 FAM216BQ8N7L0 139 aa4.1□□□□□ -1.75
HIF1A-205ENST00000547430 ZDHHC22Q8N966 263 aa4.1□□□□□ -1.75
HIF1A-205ENST00000547430 ADTRPQ96IZ2 230 aa4.1□□□□□ -1.75
HIF1A-205ENST00000547430 SPIN2AQ99865 258 aa4.1□□□□□ -1.75
HIF1A-205ENST00000547430 SPIN2BQ9BPZ2 258 aa4.1□□□□□ -1.75
HIF1A-205ENST00000547430 SEC22CQ9BRL7 303 aa4.1□□□□□ -1.75
HIF1A-205ENST00000547430 TAF9BQ9HBM6 251 aa4.1□□□□□ -1.75
HIF1A-205ENST00000547430 SDHAF2Q9NX18 166 aa4.1□□□□□ -1.75
HIF1A-205ENST00000547430 FAM208BQ5VWN6 2430 aa4.1□□□□□ -1.75
HIF1A-205ENST00000547430 FLNCQ14315 2725 aa4.09□□□□□ -1.75
HIF1A-205ENST00000547430 CHD6Q8TD26 2715 aa4.09□□□□□ -1.75
HIF1A-205ENST00000547430 TRBV6-7A0A0A0MS04 114 aa4.09□□□□□ -1.75
HIF1A-205ENST00000547430 CEACAM18A8MTB9 384 aa4.09□□□□□ -1.75
HIF1A-205ENST00000547430 NDUFB3O43676 98 aa4.09□□□□□ -1.75
HIF1A-205ENST00000547430 NDUFA2O43678 99 aa4.09□□□□□ -1.75
HIF1A-205ENST00000547430 PPYP01298 95 aa4.09□□□□□ -1.75
HIF1A-205ENST00000547430 HBZP02008 142 aa4.09□□□□□ -1.75
HIF1A-205ENST00000547430 CTSDP07339 412 aaPredicted RBP4.09□□□□□ -1.75
HIF1A-205ENST00000547430 OR4E1P0C645 316 aa4.09□□□□□ -1.75
HIF1A-205ENST00000547430 ZNF728P0DKX0 622 aa4.09□□□□□ -1.75
HIF1A-205ENST00000547430 AKR1C4P17516 323 aa4.09□□□□□ -1.75
HIF1A-205ENST00000547430 GZMHP20718 246 aa4.09□□□□□ -1.75
HIF1A-205ENST00000547430 ERP29P30040 261 aaKnown RBP4.09□□□□□ -1.75
HIF1A-205ENST00000547430 FXYD4P59646 89 aa4.09□□□□□ -1.75
HIF1A-205ENST00000547430 RRAS2P62070 204 aaPredicted RBP4.09□□□□□ -1.75
HIF1A-205ENST00000547430 ZNF816Q0VGE8 651 aaPredicted RBP4.09□□□□□ -1.75
HIF1A-205ENST00000547430 BAMBIQ13145 260 aa4.09□□□□□ -1.75
HIF1A-205ENST00000547430 SURF2Q15527 256 aaPredicted RBP4.09□□□□□ -1.75
HIF1A-205ENST00000547430 KCNJ8Q15842 424 aa4.09□□□□□ -1.75
HIF1A-205ENST00000547430 TTC32Q5I0X7 151 aa4.09□□□□□ -1.75
HIF1A-205ENST00000547430 CLEC18BQ6UXF7 455 aa4.09□□□□□ -1.75
HIF1A-205ENST00000547430 H1FOOQ8IZA3 346 aaPredicted RBP4.09□□□□□ -1.75
HIF1A-205ENST00000547430 OR10J5Q8NHC4 309 aa4.09□□□□□ -1.75
HIF1A-205ENST00000547430 ZNF431Q8TF32 576 aaPredicted RBP4.09□□□□□ -1.75
HIF1A-205ENST00000547430 ARL11Q969Q4 196 aa4.09□□□□□ -1.75
HIF1A-205ENST00000547430 RTBDNQ9BSG5 229 aaPredicted RBP4.09□□□□□ -1.75
HIF1A-205ENST00000547430 FXYD6Q9H0Q3 95 aa4.09□□□□□ -1.75
HIF1A-205ENST00000547430 ALX4Q9H161 411 aaPredicted RBP4.09□□□□□ -1.75
HIF1A-205ENST00000547430 MED28Q9H204 178 aa4.09□□□□□ -1.75
HIF1A-205ENST00000547430 KAAG1Q9UBP8 84 aa4.09□□□□□ -1.75
HIF1A-205ENST00000547430 C14orf166Q9Y224 244 aaKnown RBP4.09□□□□□ -1.75
HIF1A-205ENST00000547430 IGKV2-28A0A075B6P5 120 aa4.08□□□□□ -1.76
HIF1A-205ENST00000547430 TRGV10A0A0A0MS01 117 aa4.08□□□□□ -1.76
HIF1A-205ENST00000547430 IGHV3-43A0A0B4J1X8 118 aa4.08□□□□□ -1.76
HIF1A-205ENST00000547430 C9orf170A2RU37 121 aa4.08□□□□□ -1.76
HIF1A-205ENST00000547430 SNRPGP15A8MWD9 76 aa4.08□□□□□ -1.76
HIF1A-205ENST00000547430 C15orf65H3BRN8 121 aa4.08□□□□□ -1.76
HIF1A-205ENST00000547430 SSNA1O43805 119 aa4.08□□□□□ -1.76
HIF1A-205ENST00000547430 DSCAMO60469 2012 aa4.08□□□□□ -1.76
HIF1A-205ENST00000547430 CREBL2O60519 120 aaPredicted RBP4.08□□□□□ -1.76
HIF1A-205ENST00000547430 UBR5O95071 2799 aaPredicted RBP4.08□□□□□ -1.76
HIF1A-205ENST00000547430 FSTL3O95633 263 aa4.08□□□□□ -1.76
HIF1A-205ENST00000547430 IGKV2D-28P01615 120 aa4.08□□□□□ -1.76
HIF1A-205ENST00000547430 TRAPPC2P0DI81 140 aa4.08□□□□□ -1.76
HIF1A-205ENST00000547430 TRAPPC2BP0DI82 140 aa4.08□□□□□ -1.76
HIF1A-205ENST00000547430 CGB3P0DN86 165 aa4.08□□□□□ -1.76
HIF1A-205ENST00000547430 CGB7P0DN87 165 aa4.08□□□□□ -1.76
HIF1A-205ENST00000547430 IL3RAP26951 378 aa4.08□□□□□ -1.76
HIF1A-205ENST00000547430 EFNA4P52798 201 aa4.08□□□□□ -1.76
HIF1A-205ENST00000547430 TMEM33P57088 247 aa4.08□□□□□ -1.76
HIF1A-205ENST00000547430 LINC00315P59091 139 aa4.08□□□□□ -1.76
HIF1A-205ENST00000547430 MEF2CQ06413 473 aaPredicted RBP4.08□□□□□ -1.76
HIF1A-205ENST00000547430 PPP1R1AQ13522 171 aa4.08□□□□□ -1.76
HIF1A-205ENST00000547430 SLC9A3R2Q15599 337 aa4.08□□□□□ -1.76
HIF1A-205ENST00000547430 LTC4SQ16873 150 aa4.08□□□□□ -1.76
HIF1A-205ENST00000547430 LPCAT3Q6P1A2 487 aa4.08□□□□□ -1.76
HIF1A-205ENST00000547430 FAM19A1Q7Z5A9 133 aa4.08□□□□□ -1.76
HIF1A-205ENST00000547430 LYG2Q86SG7 212 aa4.08□□□□□ -1.76
HIF1A-205ENST00000547430 AKAP14Q86UN6 197 aa4.08□□□□□ -1.76
HIF1A-205ENST00000547430 C12orf45Q8N5I9 185 aaPredicted RBP4.08□□□□□ -1.76
HIF1A-205ENST00000547430 ZNF565Q8N9K5 539 aa4.08□□□□□ -1.76
HIF1A-205ENST00000547430 H1FXQ92522 213 aaKnown RBP4.08□□□□□ -1.76
HIF1A-205ENST00000547430 GALMQ96C23 342 aa4.08□□□□□ -1.76
HIF1A-205ENST00000547430 OR10C1Q96KK4 312 aa4.08□□□□□ -1.76
HIF1A-205ENST00000547430 C19orf12Q9NSK7 152 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms