RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 KLK15Q9H2R5 256 aa11.78□□□□□ -0.52
HOXC11-202ENST00000546378 WNK1Q9H4A3 2382 aa11.78□□□□□ -0.52
HOXC11-202ENST00000546378 OR2J3O76001 311 aa11.77□□□□□ -0.52
HOXC11-202ENST00000546378 BCL6BQ8N143 479 aaPredicted RBP11.77□□□□□ -0.52
HOXC11-202ENST00000546378 GRAMD2BQ96HH9 432 aa11.77□□□□□ -0.52
HOXC11-202ENST00000546378 ZNF714Q96N38 554 aa11.77□□□□□ -0.52
HOXC11-202ENST00000546378 TXNDC17Q9BRA2 123 aa11.77□□□□□ -0.52
HOXC11-202ENST00000546378 RPP21Q9H633 154 aaKnown RBP11.77□□□□□ -0.52
HOXC11-202ENST00000546378 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.77□□□□□ -0.53
HOXC11-202ENST00000546378 SMIM27A0A1W2PRY6 76 aa11.77□□□□□ -0.53
HOXC11-202ENST00000546378 K7ENP7 123 aa11.77□□□□□ -0.53
HOXC11-202ENST00000546378 PSG9Q00887 426 aa11.77□□□□□ -0.53
HOXC11-202ENST00000546378 TRGV8A0A0C4DH27 118 aa11.77□□□□□ -0.53
HOXC11-202ENST00000546378 GAGE10A6NGK3 116 aa11.77□□□□□ -0.53
HOXC11-202ENST00000546378 A8MWL6 223 aa11.77□□□□□ -0.53
HOXC11-202ENST00000546378 IFI27P40305 119 aaPredicted RBP11.77□□□□□ -0.53
HOXC11-202ENST00000546378 RBX1P62877 108 aa11.77□□□□□ -0.53
HOXC11-202ENST00000546378 CACNG7P62955 275 aa11.77□□□□□ -0.53
HOXC11-202ENST00000546378 IGFL3Q6UXB1 125 aa11.77□□□□□ -0.53
HOXC11-202ENST00000546378 SEM1Q6ZVN7 128 aa11.77□□□□□ -0.53
HOXC11-202ENST00000546378 GAFA1Q96PS6 74 aa11.77□□□□□ -0.53
HOXC11-202ENST00000546378 BPIFA4PQ86YQ2 179 aa11.76□□□□□ -0.53
HOXC11-202ENST00000546378 PKD1L2Q7Z442 2459 aa11.76□□□□□ -0.53
HOXC11-202ENST00000546378 C7orf71A4D174 169 aa11.76□□□□□ -0.53
HOXC11-202ENST00000546378 C22orf46C9J442 243 aa11.76□□□□□ -0.53
HOXC11-202ENST00000546378 GCSHP23434 173 aa11.76□□□□□ -0.53
HOXC11-202ENST00000546378 IGF2BP2-AS1Q96M15 143 aa11.76□□□□□ -0.53
HOXC11-202ENST00000546378 FAM215AQ9Y5M1 114 aa11.76□□□□□ -0.53
HOXC11-202ENST00000546378 FAM208BQ5VWN6 2430 aa11.76□□□□□ -0.53
HOXC11-202ENST00000546378 TRBV9A0A0B4J1U6 114 aa11.75□□□□□ -0.53
HOXC11-202ENST00000546378 VSTM2AQ8TAG5 236 aa11.75□□□□□ -0.53
HOXC11-202ENST00000546378 C11orf52Q96A22 123 aa11.75□□□□□ -0.53
HOXC11-202ENST00000546378 GPR82Q96P67 336 aa11.75□□□□□ -0.53
HOXC11-202ENST00000546378 CST9LQ9H4G1 147 aa11.75□□□□□ -0.53
HOXC11-202ENST00000546378 C2orf70A6NJV1 201 aa11.75□□□□□ -0.53
HOXC11-202ENST00000546378 SUB1P53999 127 aaKnown RBP eCLIP11.75□□□□□ -0.53
HOXC11-202ENST00000546378 TMEM200BQ69YZ2 307 aa11.75□□□□□ -0.53
HOXC11-202ENST00000546378 AMN1Q8IY45 258 aa11.75□□□□□ -0.53
HOXC11-202ENST00000546378 DDB2Q92466 427 aa11.75□□□□□ -0.53
HOXC11-202ENST00000546378 AP5S1Q9NUS5 200 aa11.75□□□□□ -0.53
HOXC11-202ENST00000546378 ONECUT1Q9UBC0 465 aa11.75□□□□□ -0.53
HOXC11-202ENST00000546378 GAGE12BA1L429 117 aa11.75□□□□□ -0.53
HOXC11-202ENST00000546378 NCBP2LA6PVI3 153 aaKnown RBP11.75□□□□□ -0.53
HOXC11-202ENST00000546378 GUSBP1Q15486 140 aa11.75□□□□□ -0.53
HOXC11-202ENST00000546378 TIMM23BQ5SRD1 257 aa11.75□□□□□ -0.53
HOXC11-202ENST00000546378 C1orf185Q5T7R7 199 aa11.75□□□□□ -0.53
HOXC11-202ENST00000546378 MBNL2Q5VZF2 373 aaKnown RBP11.75□□□□□ -0.53
HOXC11-202ENST00000546378 FXYD5Q96DB9 178 aa11.75□□□□□ -0.53
HOXC11-202ENST00000546378 C8orf49Q96NF6 230 aa11.75□□□□□ -0.53
HOXC11-202ENST00000546378 NDUFB3O43676 98 aa11.74□□□□□ -0.53
HOXC11-202ENST00000546378 IL4P05112 153 aa11.74□□□□□ -0.53
HOXC11-202ENST00000546378 KIR2DS2P43631 304 aa11.74□□□□□ -0.53
HOXC11-202ENST00000546378 GAGE1Q13065 139 aa11.74□□□□□ -0.53
HOXC11-202ENST00000546378 Q5PR19 223 aa11.74□□□□□ -0.53
HOXC11-202ENST00000546378 URB1-AS1Q96HZ7 61 aa11.74□□□□□ -0.53
HOXC11-202ENST00000546378 IGLC7A0M8Q6 106 aa11.74□□□□□ -0.53
HOXC11-202ENST00000546378 TMPRSS3P57727 454 aa11.74□□□□□ -0.53
HOXC11-202ENST00000546378 LY6DQ14210 128 aa11.74□□□□□ -0.53
HOXC11-202ENST00000546378 PERPQ96FX8 193 aa11.74□□□□□ -0.53
HOXC11-202ENST00000546378 INSIG2Q9Y5U4 225 aa11.74□□□□□ -0.53
HOXC11-202ENST00000546378 H0YJW9 148 aa11.73□□□□□ -0.53
HOXC11-202ENST00000546378 PRR7Q8TB68 274 aa11.73□□□□□ -0.53
HOXC11-202ENST00000546378 SLC25A15Q9Y619 301 aa11.73□□□□□ -0.53
HOXC11-202ENST00000546378 IGKV2-40A0A087WW87 121 aaPredicted RBP11.73□□□□□ -0.53
HOXC11-202ENST00000546378 IGHV2-26A0A0B4J1V2 119 aa11.73□□□□□ -0.53
HOXC11-202ENST00000546378 TCRBV4S1A1TA0A5B7 111 aa11.73□□□□□ -0.53
HOXC11-202ENST00000546378 IGKV2D-40P01614 121 aaPredicted RBP11.73□□□□□ -0.53
HOXC11-202ENST00000546378 ORM1P02763 201 aa11.73□□□□□ -0.53
HOXC11-202ENST00000546378 RPL27AP46776 148 aaKnown RBP11.73□□□□□ -0.53
HOXC11-202ENST00000546378 MZT1Q08AG7 82 aa11.73□□□□□ -0.53
HOXC11-202ENST00000546378 RASL11BQ9BPW5 248 aa11.73□□□□□ -0.53
HOXC11-202ENST00000546378 FAM231BA6NCW3 169 aa11.73□□□□□ -0.53
HOXC11-202ENST00000546378 NPIPB5A8MRT5 1133 aa11.73□□□□□ -0.53
HOXC11-202ENST00000546378 D6R8Y8 96 aa11.73□□□□□ -0.53
HOXC11-202ENST00000546378 K7ERJ3 54 aa11.73□□□□□ -0.53
HOXC11-202ENST00000546378 VMA21Q3ZAQ7 101 aa11.73□□□□□ -0.53
HOXC11-202ENST00000546378 Q8NA96 180 aa11.73□□□□□ -0.53
HOXC11-202ENST00000546378 OR4C13Q8NGP0 309 aa11.73□□□□□ -0.53
HOXC11-202ENST00000546378 MBD6Q96DN6 1003 aa11.73□□□□□ -0.53
HOXC11-202ENST00000546378 F2RL2O00254 374 aa11.72□□□□□ -0.53
HOXC11-202ENST00000546378 PRSS1P07477 247 aa11.72□□□□□ -0.53
HOXC11-202ENST00000546378 HLA-DMBP28068 263 aa11.72□□□□□ -0.53
HOXC11-202ENST00000546378 TWIST1Q15672 202 aa11.72□□□□□ -0.53
HOXC11-202ENST00000546378 WFDC12Q8WWY7 111 aa11.72□□□□□ -0.53
HOXC11-202ENST00000546378 HLA-DRB1P01911 266 aa11.72□□□□□ -0.53
HOXC11-202ENST00000546378 GPR183P32249 361 aa11.72□□□□□ -0.53
HOXC11-202ENST00000546378 BVES-AS1Q5T3Y7 98 aa11.72□□□□□ -0.53
HOXC11-202ENST00000546378 PNKDQ8N490 385 aa11.72□□□□□ -0.53
HOXC11-202ENST00000546378 OR4F17Q8NGA8 305 aa11.72□□□□□ -0.53
HOXC11-202ENST00000546378 IGHV1-69-2A0A0G2JMI3 117 aa11.71□□□□□ -0.53
HOXC11-202ENST00000546378 CT45A10P0DMU9 189 aa11.71□□□□□ -0.53
HOXC11-202ENST00000546378 BSPH1Q075Z2 132 aa11.71□□□□□ -0.53
HOXC11-202ENST00000546378 C5orf17Q8NAS9 161 aa11.71□□□□□ -0.53
HOXC11-202ENST00000546378 ORAOV1Q8WV07 137 aa11.71□□□□□ -0.53
HOXC11-202ENST00000546378 HIGD1AQ9Y241 93 aa11.71□□□□□ -0.53
HOXC11-202ENST00000546378 TAX1BP3O14907 124 aa11.71□□□□□ -0.53
HOXC11-202ENST00000546378 TGFAP01135 160 aa11.71□□□□□ -0.53
HOXC11-202ENST00000546378 TCRAP04437 139 aa11.71□□□□□ -0.53
HOXC11-202ENST00000546378 ANKRD39Q53RE8 183 aa11.71□□□□□ -0.53
HOXC11-202ENST00000546378 PCP2Q8IVA1 136 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms