RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 C10orf113Q5VZT2 155 aa12.2□□□□□ -0.46
LIMS2-217ENST00000545738 FAM24BQ8N5W8 94 aa12.2□□□□□ -0.46
LIMS2-217ENST00000545738 ZNF709Q8N972 641 aa12.2□□□□□ -0.46
LIMS2-217ENST00000545738 BOLA1Q9Y3E2 137 aa12.2□□□□□ -0.46
LIMS2-217ENST00000545738 A0A1W2PS18 150 aa12.19□□□□□ -0.46
LIMS2-217ENST00000545738 C17orf112F2Z3M2 114 aa12.19□□□□□ -0.46
LIMS2-217ENST00000545738 JTBO76095 146 aa12.19□□□□□ -0.46
LIMS2-217ENST00000545738 RAB2AP61019 212 aa12.19□□□□□ -0.46
LIMS2-217ENST00000545738 PXDC1Q5TGL8 231 aa12.19□□□□□ -0.46
LIMS2-217ENST00000545738 TIMM9Q9Y5J7 89 aa12.19□□□□□ -0.46
LIMS2-217ENST00000545738 ELOA3CA0A087WX78 387 aaPredicted RBP12.18□□□□□ -0.46
LIMS2-217ENST00000545738 S100A6P06703 90 aa12.18□□□□□ -0.46
LIMS2-217ENST00000545738 SNRPCP09234 159 aaKnown RBP12.18□□□□□ -0.46
LIMS2-217ENST00000545738 CD7P09564 240 aa12.18□□□□□ -0.46
LIMS2-217ENST00000545738 GP9P14770 177 aa12.18□□□□□ -0.46
LIMS2-217ENST00000545738 TFPI2P48307 235 aa12.18□□□□□ -0.46
LIMS2-217ENST00000545738 LCN12Q6JVE5 192 aa12.18□□□□□ -0.46
LIMS2-217ENST00000545738 SIGLEC15Q6ZMC9 328 aa12.18□□□□□ -0.46
LIMS2-217ENST00000545738 MIR17HGQ75NE6 70 aa12.18□□□□□ -0.46
LIMS2-217ENST00000545738 OR2K2Q8NGT1 345 aa12.18□□□□□ -0.46
LIMS2-217ENST00000545738 PSMG3Q9BT73 122 aaPredicted RBP12.18□□□□□ -0.46
LIMS2-217ENST00000545738 ZNF471Q9BX82 626 aaPredicted RBP12.18□□□□□ -0.46
LIMS2-217ENST00000545738 GPR61Q9BZJ8 451 aa12.18□□□□□ -0.46
LIMS2-217ENST00000545738 WFDC10AQ9H1F0 79 aa12.18□□□□□ -0.46
LIMS2-217ENST00000545738 MS4A6AQ9H2W1 248 aa12.18□□□□□ -0.46
LIMS2-217ENST00000545738 BORCS7-ASMTA0A0B4J1R7 106 aa12.17□□□□□ -0.46
LIMS2-217ENST00000545738 KANTRA0A1W2PQU2 76 aa12.17□□□□□ -0.46
LIMS2-217ENST00000545738 GUCA2BQ16661 112 aa12.17□□□□□ -0.46
LIMS2-217ENST00000545738 RBPMS2Q6ZRY4 209 aaKnown RBP12.17□□□□□ -0.46
LIMS2-217ENST00000545738 OR8I2Q8N0Y5 310 aa12.17□□□□□ -0.46
LIMS2-217ENST00000545738 OR2G3Q8NGZ4 309 aa12.17□□□□□ -0.46
LIMS2-217ENST00000545738 DCANP1Q8TF63 244 aa12.17□□□□□ -0.46
LIMS2-217ENST00000545738 GATAD1Q8WUU5 269 aa12.17□□□□□ -0.46
LIMS2-217ENST00000545738 AURKAIP1Q9NWT8 199 aaPredicted RBP12.17□□□□□ -0.46
LIMS2-217ENST00000545738 SPP1P10451 314 aa12.17□□□□□ -0.46
LIMS2-217ENST00000545738 C1orf194Q5T5A4 169 aa12.17□□□□□ -0.46
LIMS2-217ENST00000545738 FAM78BQ5VT40 261 aa12.17□□□□□ -0.46
LIMS2-217ENST00000545738 SSX7Q7RTT5 188 aa12.17□□□□□ -0.46
LIMS2-217ENST00000545738 OR1L4Q8NGR5 311 aa12.17□□□□□ -0.46
LIMS2-217ENST00000545738 NARS2Q96I59 477 aaKnown RBP12.17□□□□□ -0.46
LIMS2-217ENST00000545738 FAM167A-AS1Q96KT0 104 aa12.17□□□□□ -0.46
LIMS2-217ENST00000545738 PFDN5Q99471 154 aa12.17□□□□□ -0.46
LIMS2-217ENST00000545738 C19orf73Q9NVV2 129 aa12.17□□□□□ -0.46
LIMS2-217ENST00000545738 TRAV25A0A0B4J276 109 aa12.16□□□□□ -0.46
LIMS2-217ENST00000545738 RPL11P62913 178 aaKnown RBP12.16□□□□□ -0.46
LIMS2-217ENST00000545738 WFDC3Q8IUB2 231 aa12.16□□□□□ -0.46
LIMS2-217ENST00000545738 Q8N1Y9 231 aa12.16□□□□□ -0.46
LIMS2-217ENST00000545738 RPP25LQ8N5L8 163 aaKnown RBP12.16□□□□□ -0.46
LIMS2-217ENST00000545738 STXBP6Q8NFX7 210 aa12.16□□□□□ -0.46
LIMS2-217ENST00000545738 GRAMD2BQ96HH9 432 aa12.16□□□□□ -0.46
LIMS2-217ENST00000545738 SPAG8Q99932 426 aaPredicted RBP12.16□□□□□ -0.46
LIMS2-217ENST00000545738 SLC25A2Q9BXI2 301 aa12.16□□□□□ -0.46
LIMS2-217ENST00000545738 TMEM231Q9H6L2 316 aa12.16□□□□□ -0.46
LIMS2-217ENST00000545738 KCNIP2Q9NS61 270 aa12.16□□□□□ -0.46
LIMS2-217ENST00000545738 SOCS3O14543 225 aa12.15□□□□□ -0.46
LIMS2-217ENST00000545738 ODF3L2Q3SX64 289 aa12.15□□□□□ -0.46
LIMS2-217ENST00000545738 STOML3Q8TAV4 291 aa12.15□□□□□ -0.46
LIMS2-217ENST00000545738 ZNF503Q96F45 646 aa12.15□□□□□ -0.46
LIMS2-217ENST00000545738 RPRMQ9NS64 109 aa12.15□□□□□ -0.46
LIMS2-217ENST00000545738 PYYP10082 97 aa12.14□□□□□ -0.47
LIMS2-217ENST00000545738 BMI1P35226 326 aa12.14□□□□□ -0.47
LIMS2-217ENST00000545738 ZNF124Q15973 351 aa12.14□□□□□ -0.47
LIMS2-217ENST00000545738 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.14□□□□□ -0.47
LIMS2-217ENST00000545738 ZNF767PQ75MW2 155 aa12.14□□□□□ -0.47
LIMS2-217ENST00000545738 GNPNAT1Q96EK6 184 aaPredicted RBP12.14□□□□□ -0.47
LIMS2-217ENST00000545738 H3BQ15 152 aa12.14□□□□□ -0.47
LIMS2-217ENST00000545738 H3BTX0 84 aa12.14□□□□□ -0.47
LIMS2-217ENST00000545738 K7EIL1 84 aa12.14□□□□□ -0.47
LIMS2-217ENST00000545738 K7EQG2 157 aa12.14□□□□□ -0.47
LIMS2-217ENST00000545738 HMGB3O15347 200 aaKnown RBP12.14□□□□□ -0.47
LIMS2-217ENST00000545738 ZNF726P1Q15940 193 aa12.14□□□□□ -0.47
LIMS2-217ENST00000545738 NRN1Q9NPD7 142 aa12.14□□□□□ -0.47
LIMS2-217ENST00000545738 UBQLN2Q9UHD9 624 aa12.14□□□□□ -0.47
LIMS2-217ENST00000545738 FUT9Q9Y231 359 aa12.14□□□□□ -0.47
LIMS2-217ENST00000545738 DNAH9Q9NYC9 4486 aa12.13□□□□□ -0.47
LIMS2-217ENST00000545738 HELTA6NFD8 242 aa12.13□□□□□ -0.47
LIMS2-217ENST00000545738 IGLC2P0DOY2 106 aa12.13□□□□□ -0.47
LIMS2-217ENST00000545738 FHITP49789 147 aa12.13□□□□□ -0.47
LIMS2-217ENST00000545738 SERF2P84101 59 aa12.13□□□□□ -0.47
LIMS2-217ENST00000545738 IGFL4Q6B9Z1 124 aa12.13□□□□□ -0.47
LIMS2-217ENST00000545738 BAP18Q8IXM2 172 aa12.13□□□□□ -0.47
LIMS2-217ENST00000545738 OR10G4Q8NGN3 311 aa12.13□□□□□ -0.47
LIMS2-217ENST00000545738 OR10G9Q8NGN4 311 aa12.13□□□□□ -0.47
LIMS2-217ENST00000545738 OR10G7Q8NGN6 311 aa12.13□□□□□ -0.47
LIMS2-217ENST00000545738 AGRNO00468 2067 aa12.13□□□□□ -0.47
LIMS2-217ENST00000545738 SLC17A3O00476 420 aa12.12□□□□□ -0.47
LIMS2-217ENST00000545738 PRB4P10163 310 aaPredicted RBP12.12□□□□□ -0.47
LIMS2-217ENST00000545738 CD81P60033 236 aa12.12□□□□□ -0.47
LIMS2-217ENST00000545738 ACOT6Q3I5F7 207 aaPredicted RBP12.12□□□□□ -0.47
LIMS2-217ENST00000545738 TMED6Q8WW62 240 aa12.12□□□□□ -0.47
LIMS2-217ENST00000545738 CITED4Q96RK1 184 aa12.12□□□□□ -0.47
LIMS2-217ENST00000545738 PFDN2Q9UHV9 154 aa12.12□□□□□ -0.47
LIMS2-217ENST00000545738 TRAV8-2A0A0B4J237 113 aa12.11□□□□□ -0.47
LIMS2-217ENST00000545738 CD5P06127 495 aa12.11□□□□□ -0.47
LIMS2-217ENST00000545738 RPL7P18124 248 aaKnown RBP12.11□□□□□ -0.47
LIMS2-217ENST00000545738 DEFB1P60022 68 aa12.11□□□□□ -0.47
LIMS2-217ENST00000545738 ZNF586Q9NXT0 402 aa12.11□□□□□ -0.47
LIMS2-217ENST00000545738 ZNF688P0C7X2 276 aa12.11□□□□□ -0.47
LIMS2-217ENST00000545738 TPT1P13693 172 aaKnown RBP12.11□□□□□ -0.47
LIMS2-217ENST00000545738 GALR1P47211 349 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms