RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 PSG1P11464 419 aa6.95□□□□□ -1.3
TDP1-204ENST00000545686 SEC11AP67812 179 aa6.95□□□□□ -1.3
TDP1-204ENST00000545686 LYPD2Q6UXB3 125 aa6.95□□□□□ -1.3
TDP1-204ENST00000545686 FAM57AQ8TBR7 257 aa6.95□□□□□ -1.3
TDP1-204ENST00000545686 RASL11BQ9BPW5 248 aa6.95□□□□□ -1.3
TDP1-204ENST00000545686 ZNF747Q9BV97 191 aa6.95□□□□□ -1.3
TDP1-204ENST00000545686 NGBQ9NPG2 151 aa6.95□□□□□ -1.3
TDP1-204ENST00000545686 CTSZQ9UBR2 303 aa6.95□□□□□ -1.3
TDP1-204ENST00000545686 I3L2K1 104 aa6.95□□□□□ -1.3
TDP1-204ENST00000545686 FTH1P19P0C7X4 201 aa6.95□□□□□ -1.3
TDP1-204ENST00000545686 GPR183P32249 361 aa6.95□□□□□ -1.3
TDP1-204ENST00000545686 ARF6P62330 175 aa6.95□□□□□ -1.3
TDP1-204ENST00000545686 COTL1Q14019 142 aa6.95□□□□□ -1.3
TDP1-204ENST00000545686 ZNF493Q6ZR52 646 aa6.95□□□□□ -1.3
TDP1-204ENST00000545686 FA2HQ7L5A8 372 aa6.95□□□□□ -1.3
TDP1-204ENST00000545686 PPP1R27Q86WC6 154 aa6.95□□□□□ -1.3
TDP1-204ENST00000545686 SRSF12Q8WXF0 261 aaKnown RBP6.95□□□□□ -1.3
TDP1-204ENST00000545686 ZC2HC1AQ96GY0 325 aa6.95□□□□□ -1.3
TDP1-204ENST00000545686 PEF1Q9UBV8 284 aaKnown RBP6.95□□□□□ -1.3
TDP1-204ENST00000545686 TP73-AS1Q9UF72 201 aa6.95□□□□□ -1.3
TDP1-204ENST00000545686 TRBV19A0A075B6N1 114 aa6.94□□□□□ -1.3
TDP1-204ENST00000545686 VSTM5A8MXK1 200 aa6.94□□□□□ -1.3
TDP1-204ENST00000545686 C16orf97H3BN30 126 aa6.94□□□□□ -1.3
TDP1-204ENST00000545686 H3BRN7 92 aa6.94□□□□□ -1.3
TDP1-204ENST00000545686 H3BTX0 84 aa6.94□□□□□ -1.3
TDP1-204ENST00000545686 ARMS2P0C7Q2 107 aa6.94□□□□□ -1.3
TDP1-204ENST00000545686 PRR31Q5SQ13 230 aa6.94□□□□□ -1.3
TDP1-204ENST00000545686 BPIFA4PQ86YQ2 179 aa6.94□□□□□ -1.3
TDP1-204ENST00000545686 RNF5Q99942 180 aa6.94□□□□□ -1.3
TDP1-204ENST00000545686 SHANK2-AS3Q9BTD1 123 aa6.94□□□□□ -1.3
TDP1-204ENST00000545686 OR2T8A6NH00 312 aa6.94□□□□□ -1.3
TDP1-204ENST00000545686 ZNF785A8K8V0 405 aa6.94□□□□□ -1.3
TDP1-204ENST00000545686 K7EM74 188 aa6.94□□□□□ -1.3
TDP1-204ENST00000545686 IGLV1-47P01700 117 aa6.94□□□□□ -1.3
TDP1-204ENST00000545686 ZNF138P52744 262 aa6.94□□□□□ -1.3
TDP1-204ENST00000545686 PSG3Q16557 428 aa6.94□□□□□ -1.3
TDP1-204ENST00000545686 C2orf91Q6ZV80 131 aa6.94□□□□□ -1.3
TDP1-204ENST00000545686 LHFPL4Q7Z7J7 247 aa6.94□□□□□ -1.3
TDP1-204ENST00000545686 EXOC3-AS1Q8N2X6 119 aa6.94□□□□□ -1.3
TDP1-204ENST00000545686 OR1N2Q8NGR9 330 aa6.94□□□□□ -1.3
TDP1-204ENST00000545686 CST9LQ9H4G1 147 aa6.94□□□□□ -1.3
TDP1-204ENST00000545686 ZGRF1Q86YA3 2104 aa6.94□□□□□ -1.3
TDP1-204ENST00000545686 IGHV3-72A0A0B4J1Y9 119 aa6.93□□□□□ -1.3
TDP1-204ENST00000545686 IGHV1-3A0A0C4DH29 117 aa6.93□□□□□ -1.3
TDP1-204ENST00000545686 SERTM2A0A1B0GWG4 89 aa6.93□□□□□ -1.3
TDP1-204ENST00000545686 BSPH1Q075Z2 132 aa6.93□□□□□ -1.3
TDP1-204ENST00000545686 SIGLEC15Q6ZMC9 328 aa6.93□□□□□ -1.3
TDP1-204ENST00000545686 S100A7AQ86SG5 101 aa6.93□□□□□ -1.3
TDP1-204ENST00000545686 WFDC8Q8IUA0 241 aa6.93□□□□□ -1.3
TDP1-204ENST00000545686 CCL17Q92583 94 aa6.93□□□□□ -1.3
TDP1-204ENST00000545686 PSG8Q9UQ74 426 aa6.93□□□□□ -1.3
TDP1-204ENST00000545686 U3KQK5 164 aa6.93□□□□□ -1.3
TDP1-204ENST00000545686 IGHV3-21A0A0B4J1V1 117 aa6.93□□□□□ -1.3
TDP1-204ENST00000545686 IGKV1-17P01599 117 aa6.93□□□□□ -1.3
TDP1-204ENST00000545686 RBP4P02753 201 aa6.93□□□□□ -1.3
TDP1-204ENST00000545686 CNTFRP26992 372 aa6.93□□□□□ -1.3
TDP1-204ENST00000545686 PSG9Q00887 426 aa6.93□□□□□ -1.3
TDP1-204ENST00000545686 PDE6HQ13956 83 aa6.93□□□□□ -1.3
TDP1-204ENST00000545686 LGALS9BQ3B8N2 356 aa6.93□□□□□ -1.3
TDP1-204ENST00000545686 OCIAD2Q56VL3 154 aa6.93□□□□□ -1.3
TDP1-204ENST00000545686 LGALS9CQ6DKI2 356 aa6.93□□□□□ -1.3
TDP1-204ENST00000545686 PRSS3P2Q8NHM4 247 aa6.93□□□□□ -1.3
TDP1-204ENST00000545686 INSIG2Q9Y5U4 225 aa6.93□□□□□ -1.3
TDP1-204ENST00000545686 A0A087X0K7 114 aa6.92□□□□□ -1.3
TDP1-204ENST00000545686 CSN3P07498 182 aa6.92□□□□□ -1.3
TDP1-204ENST00000545686 AMMECR1LQ6DCA0 310 aa6.92□□□□□ -1.3
TDP1-204ENST00000545686 DEFB123Q8N688 67 aa6.92□□□□□ -1.3
TDP1-204ENST00000545686 RNASE6Q93091 150 aaKnown RBP6.92□□□□□ -1.3
TDP1-204ENST00000545686 CBY3A6NI87 242 aa6.92□□□□□ -1.3
TDP1-204ENST00000545686 H0Y8G0 127 aa6.92□□□□□ -1.3
TDP1-204ENST00000545686 BUB1B-PAK6H3BSN5 160 aa6.92□□□□□ -1.3
TDP1-204ENST00000545686 CT45A10P0DMU9 189 aa6.92□□□□□ -1.3
TDP1-204ENST00000545686 FGF6P10767 208 aa6.92□□□□□ -1.3
TDP1-204ENST00000545686 APOBEC3AP31941 199 aaPredicted RBP6.92□□□□□ -1.3
TDP1-204ENST00000545686 TMEM97Q5BJF2 176 aa6.92□□□□□ -1.3
TDP1-204ENST00000545686 LDLRAD2Q5SZI1 272 aa6.92□□□□□ -1.3
TDP1-204ENST00000545686 SMIM15Q7Z3B0 74 aa6.92□□□□□ -1.3
TDP1-204ENST00000545686 COX8CQ7Z4L0 72 aa6.92□□□□□ -1.3
TDP1-204ENST00000545686 DEFB124Q8NES8 71 aa6.92□□□□□ -1.3
TDP1-204ENST00000545686 NPFFR1Q9GZQ6 430 aa6.92□□□□□ -1.3
TDP1-204ENST00000545686 C7orf71A4D174 169 aa6.91□□□□□ -1.3
TDP1-204ENST00000545686 FBLL1A6NHQ2 334 aaKnown RBP6.91□□□□□ -1.3
TDP1-204ENST00000545686 MRPS12O15235 138 aaKnown RBP6.91□□□□□ -1.3
TDP1-204ENST00000545686 THBDP07204 575 aa6.91□□□□□ -1.3
TDP1-204ENST00000545686 APELAP0DMC3 54 aa6.91□□□□□ -1.3
TDP1-204ENST00000545686 OR9G4Q8NGQ1 327 aa6.91□□□□□ -1.3
TDP1-204ENST00000545686 RAB1BQ9H0U4 201 aa6.91□□□□□ -1.3
TDP1-204ENST00000545686 A0A096LNJ9 63 aa6.91□□□□□ -1.3
TDP1-204ENST00000545686 A0A0G2JNJ9 132 aa6.91□□□□□ -1.3
TDP1-204ENST00000545686 SPAARA0A1B0GVQ0 90 aa6.91□□□□□ -1.3
TDP1-204ENST00000545686 A6NDN8 102 aa6.91□□□□□ -1.3
TDP1-204ENST00000545686 K7EIM0 57 aa6.91□□□□□ -1.3
TDP1-204ENST00000545686 K7ERU9 68 aa6.91□□□□□ -1.3
TDP1-204ENST00000545686 SIVA1O15304 175 aa6.91□□□□□ -1.3
TDP1-204ENST00000545686 PLGLAQ15195 96 aa6.91□□□□□ -1.3
TDP1-204ENST00000545686 RNF151Q2KHN1 245 aa6.91□□□□□ -1.3
TDP1-204ENST00000545686 PRSS33Q8NF86 280 aa6.91□□□□□ -1.3
TDP1-204ENST00000545686 RNF125Q96EQ8 232 aa6.91□□□□□ -1.3
TDP1-204ENST00000545686 ZNF414Q96IQ9 312 aa6.91□□□□□ -1.3
TDP1-204ENST00000545686 FBXL15Q9H469 300 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms