RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 TNFRSF13BO14836 293 aaPredicted RBP11.94□□□□□ -0.5
USP28-214ENST00000545540 SIAH2O43255 324 aa11.94□□□□□ -0.5
USP28-214ENST00000545540 SLC25A39Q9BZJ4 359 aaPredicted RBP11.94□□□□□ -0.5
USP28-214ENST00000545540 TEX22C9J3V5 150 aa11.94□□□□□ -0.5
USP28-214ENST00000545540 BUB1B-PAK6H3BSN5 160 aa11.94□□□□□ -0.5
USP28-214ENST00000545540 NDUFB8O95169 186 aa11.94□□□□□ -0.5
USP28-214ENST00000545540 MC5RP33032 325 aa11.94□□□□□ -0.5
USP28-214ENST00000545540 C21orf62-AS1Q17RA5 79 aa11.94□□□□□ -0.5
USP28-214ENST00000545540 RASL11BQ9BPW5 248 aa11.94□□□□□ -0.5
USP28-214ENST00000545540 FCGR2BP31994 310 aaPredicted RBP11.93□□□□□ -0.5
USP28-214ENST00000545540 HBBP68871 147 aa11.93□□□□□ -0.5
USP28-214ENST00000545540 TCF15Q12870 199 aa11.93□□□□□ -0.5
USP28-214ENST00000545540 UQCR10Q9UDW1 63 aa11.93□□□□□ -0.5
USP28-214ENST00000545540 CHEK1O14757 476 aa11.93□□□□□ -0.5
USP28-214ENST00000545540 LOC389332A0A1B0GUA5 103 aa11.93□□□□□ -0.5
USP28-214ENST00000545540 C2orf70A6NJV1 201 aa11.93□□□□□ -0.5
USP28-214ENST00000545540 IGLC1P0CG04 106 aa11.93□□□□□ -0.5
USP28-214ENST00000545540 LGALS7P47929 136 aa11.93□□□□□ -0.5
USP28-214ENST00000545540 IGKV1-17P01599 117 aa11.92□□□□□ -0.5
USP28-214ENST00000545540 ARMS2P0C7Q2 107 aa11.92□□□□□ -0.5
USP28-214ENST00000545540 CA7P43166 264 aa11.92□□□□□ -0.5
USP28-214ENST00000545540 C3orf36Q3SXR2 165 aa11.92□□□□□ -0.5
USP28-214ENST00000545540 C8orf46Q8TAG6 207 aa11.92□□□□□ -0.5
USP28-214ENST00000545540 MLST8Q9BVC4 326 aa11.92□□□□□ -0.5
USP28-214ENST00000545540 IL4P05112 153 aa11.92□□□□□ -0.5
USP28-214ENST00000545540 BTF3P20290 206 aaKnown RBP11.92□□□□□ -0.5
USP28-214ENST00000545540 TSPOP30536 169 aa11.92□□□□□ -0.5
USP28-214ENST00000545540 C5orf17Q8NAS9 161 aa11.92□□□□□ -0.5
USP28-214ENST00000545540 ZC2HC1AQ96GY0 325 aa11.92□□□□□ -0.5
USP28-214ENST00000545540 F11RQ9Y624 299 aaKnown RBP11.92□□□□□ -0.5
USP28-214ENST00000545540 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.92□□□□□ -0.58e-9■■■■□ 25.3
USP28-214ENST00000545540 ATP5IP56385 69 aaPredicted RBP11.92□□□□□ -0.5
USP28-214ENST00000545540 COL5A1-AS1Q5SY13 56 aa11.92□□□□□ -0.5
USP28-214ENST00000545540 TMEM116Q8NCL8 245 aa11.92□□□□□ -0.5
USP28-214ENST00000545540 HIVEP3Q5T1R4 2406 aa11.92□□□□□ -0.5
USP28-214ENST00000545540 ZNF785A8K8V0 405 aa11.91□□□□□ -0.5
USP28-214ENST00000545540 M0QZK8 103 aa11.91□□□□□ -0.5
USP28-214ENST00000545540 IGLV1-47P01700 117 aa11.91□□□□□ -0.5
USP28-214ENST00000545540 CRYGCP07315 174 aa11.91□□□□□ -0.5
USP28-214ENST00000545540 FAM106CPP0CH98 169 aa11.91□□□□□ -0.5
USP28-214ENST00000545540 FOXE3Q13461 319 aa11.91□□□□□ -0.5
USP28-214ENST00000545540 FAM106AQ4KMX7 169 aa11.91□□□□□ -0.5
USP28-214ENST00000545540 FAM231DQ6ZW35 169 aa11.91□□□□□ -0.5
USP28-214ENST00000545540 MUC15Q8N387 334 aa11.91□□□□□ -0.5
USP28-214ENST00000545540 C8orf49Q96NF6 230 aa11.91□□□□□ -0.5
USP28-214ENST00000545540 IGHV1-24A0A0C4DH33 117 aa11.91□□□□□ -0.5
USP28-214ENST00000545540 A8MWL6 223 aa11.91□□□□□ -0.5
USP28-214ENST00000545540 TRGV9Q99603 122 aa11.91□□□□□ -0.5
USP28-214ENST00000545540 IGHV3OR16-13A0A075B7E8 117 aa11.91□□□□□ -0.5
USP28-214ENST00000545540 IGHV3-74A0A0B4J1X5 117 aa11.91□□□□□ -0.5
USP28-214ENST00000545540 SERTM2A0A1B0GWG4 89 aa11.91□□□□□ -0.5
USP28-214ENST00000545540 OR4C46A6NHA9 309 aa11.91□□□□□ -0.5
USP28-214ENST00000545540 VSTM5A8MXK1 200 aa11.91□□□□□ -0.5
USP28-214ENST00000545540 OR4A5Q8NH83 315 aa11.91□□□□□ -0.5
USP28-214ENST00000545540 A0A1B0GXF2 115 aa11.9□□□□□ -0.5
USP28-214ENST00000545540 NCBP2LA6PVI3 153 aaKnown RBP11.9□□□□□ -0.5
USP28-214ENST00000545540 FOSL1P15407 271 aa11.9□□□□□ -0.5
USP28-214ENST00000545540 ETFRF1Q6IPR1 90 aa11.9□□□□□ -0.5
USP28-214ENST00000545540 TMUB1Q9BVT8 246 aa11.9□□□□□ -0.5
USP28-214ENST00000545540 LTAP01374 205 aa11.9□□□□□ -0.5
USP28-214ENST00000545540 CD3EP07766 207 aa11.9□□□□□ -0.5
USP28-214ENST00000545540 LINC00311Q8N616 119 aa11.9□□□□□ -0.5
USP28-214ENST00000545540 TOMM40O96008 361 aa11.89□□□□□ -0.51
USP28-214ENST00000545540 HTR1DP28221 377 aa11.89□□□□□ -0.51
USP28-214ENST00000545540 APOBEC3AP31941 199 aaPredicted RBP11.89□□□□□ -0.51
USP28-214ENST00000545540 Q86TA4 180 aa11.89□□□□□ -0.51
USP28-214ENST00000545540 TEX45Q8NA69 505 aa11.89□□□□□ -0.51
USP28-214ENST00000545540 ZNF596Q8TC21 504 aa11.89□□□□□ -0.51
USP28-214ENST00000545540 RBM14Q96PK6 669 aaKnown RBP11.89□□□□□ -0.51
USP28-214ENST00000545540 CRYBG3Q68DQ2 2970 aa11.89□□□□□ -0.51
USP28-214ENST00000545540 LEPROTL1O95214 131 aa11.89□□□□□ -0.51
USP28-214ENST00000545540 IGLV2-11P01706 119 aa11.89□□□□□ -0.51
USP28-214ENST00000545540 WFDC3Q8IUB2 231 aa11.89□□□□□ -0.51
USP28-214ENST00000545540 TMEM30BQ3MIR4 351 aa11.89□□□□□ -0.51
USP28-214ENST00000545540 OR8B3Q8NGG8 313 aa11.89□□□□□ -0.51
USP28-214ENST00000545540 KLF12Q9Y4X4 402 aa11.89□□□□□ -0.51
USP28-214ENST00000545540 I3L2K1 104 aa11.88□□□□□ -0.51
USP28-214ENST00000545540 HLA-DMBP28068 263 aa11.88□□□□□ -0.51
USP28-214ENST00000545540 COX19Q49B96 90 aa11.88□□□□□ -0.51
USP28-214ENST00000545540 TMEM70Q9BUB7 260 aa11.88□□□□□ -0.51
USP28-214ENST00000545540 MRPL27Q9P0M9 148 aaKnown RBP11.88□□□□□ -0.51
USP28-214ENST00000545540 CENPEQ02224 2701 aa11.88□□□□□ -0.51
USP28-214ENST00000545540 CSMD2Q7Z408 3487 aa11.88□□□□□ -0.51
USP28-214ENST00000545540 IGHV3-66A0A0C4DH42 116 aa11.88□□□□□ -0.51
USP28-214ENST00000545540 C19orf71A6NCJ1 209 aa11.88□□□□□ -0.51
USP28-214ENST00000545540 CRYGBP07316 175 aa11.88□□□□□ -0.51
USP28-214ENST00000545540 ZNF672Q499Z4 452 aaPredicted RBP11.88□□□□□ -0.51
USP28-214ENST00000545540 FAM120AOSQ5T036 256 aa11.88□□□□□ -0.51
USP28-214ENST00000545540 RBPMS2Q6ZRY4 209 aaKnown RBP11.88□□□□□ -0.51
USP28-214ENST00000545540 ASCL5Q7RTU5 278 aa11.88□□□□□ -0.51
USP28-214ENST00000545540 STXBP6Q8NFX7 210 aa11.88□□□□□ -0.51
USP28-214ENST00000545540 Q8TAT8 98 aa11.88□□□□□ -0.51
USP28-214ENST00000545540 WIPF2Q8TF74 440 aaPredicted RBP11.88□□□□□ -0.51
USP28-214ENST00000545540 PRSS22Q9GZN4 317 aa11.88□□□□□ -0.51
USP28-214ENST00000545540 TRAV9-2A0A087WT02 112 aa11.88□□□□□ -0.51
USP28-214ENST00000545540 K7EIM0 57 aa11.88□□□□□ -0.51
USP28-214ENST00000545540 LINC00614P0C842 121 aa11.88□□□□□ -0.51
USP28-214ENST00000545540 CRIP1P50238 77 aa11.88□□□□□ -0.51
USP28-214ENST00000545540 MPV17L2Q567V2 206 aa11.88□□□□□ -0.51
USP28-214ENST00000545540 CELSR2Q9HCU4 2923 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms