RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 HLA-DRB4P13762 266 aa11.49□□□□□ -0.57
CCDC78-216ENST00000544996 CAMLGP49069 296 aa11.49□□□□□ -0.57
CCDC78-216ENST00000544996 ATP6V1FQ16864 119 aa11.49□□□□□ -0.57
CCDC78-216ENST00000544996 LRRC37A5PQ49AS3 106 aa11.49□□□□□ -0.57
CCDC78-216ENST00000544996 SPATA31B1PQ5VZV4 182 aa11.49□□□□□ -0.57
CCDC78-216ENST00000544996 FOXI2Q6ZQN5 318 aa11.49□□□□□ -0.57
CCDC78-216ENST00000544996 UHRF2Q96PU4 802 aa11.49□□□□□ -0.57
CCDC78-216ENST00000544996 MGST2Q99735 147 aa11.49□□□□□ -0.57
CCDC78-216ENST00000544996 ARV1Q9H2C2 271 aa11.49□□□□□ -0.57
CCDC78-216ENST00000544996 HLA-DRB4X5D2U9 266 aa11.49□□□□□ -0.57
CCDC78-216ENST00000544996 E5RGE8 158 aa11.48□□□□□ -0.57
CCDC78-216ENST00000544996 COX7A2P2O60397 106 aa11.48□□□□□ -0.57
CCDC78-216ENST00000544996 GIG44P09565 113 aaPredicted RBP11.48□□□□□ -0.57
CCDC78-216ENST00000544996 C4BPBP20851 252 aa11.48□□□□□ -0.57
CCDC78-216ENST00000544996 VWC2Q2TAL6 325 aa11.48□□□□□ -0.57
CCDC78-216ENST00000544996 EBLN2Q6P2I7 272 aa11.48□□□□□ -0.57
CCDC78-216ENST00000544996 Q6ZRG5 221 aa11.48□□□□□ -0.57
CCDC78-216ENST00000544996 SLC25A31Q9H0C2 315 aa11.48□□□□□ -0.57
CCDC78-216ENST00000544996 SAV1Q9H4B6 383 aaPredicted RBP11.48□□□□□ -0.57
CCDC78-216ENST00000544996 RPRMQ9NS64 109 aa11.48□□□□□ -0.57
CCDC78-216ENST00000544996 ELOA3CA0A087WX78 387 aaPredicted RBP11.47□□□□□ -0.57
CCDC78-216ENST00000544996 CXorf65A6NEN9 183 aa11.47□□□□□ -0.57
CCDC78-216ENST00000544996 BAXQ07812 192 aa11.47□□□□□ -0.57
CCDC78-216ENST00000544996 FGL1Q08830 312 aa11.47□□□□□ -0.57
CCDC78-216ENST00000544996 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.47□□□□□ -0.57
CCDC78-216ENST00000544996 LINC00305Q7Z4B0 112 aa11.47□□□□□ -0.57
CCDC78-216ENST00000544996 WDR83OSQ9Y284 106 aa11.47□□□□□ -0.57
CCDC78-216ENST00000544996 UBE2L5PA0A1B0GUS4 154 aa11.46□□□□□ -0.57
CCDC78-216ENST00000544996 H2BFSP57053 126 aa11.46□□□□□ -0.57
CCDC78-216ENST00000544996 GDF5OSQ5U4N7 250 aa11.46□□□□□ -0.57
CCDC78-216ENST00000544996 C10orf113Q5VZT2 155 aa11.46□□□□□ -0.57
CCDC78-216ENST00000544996 PATE2Q6UY27 113 aa11.46□□□□□ -0.57
CCDC78-216ENST00000544996 OR4B1Q8NGF8 309 aa11.46□□□□□ -0.57
CCDC78-216ENST00000544996 C11orf68Q9H3H3 251 aaKnown RBP11.46□□□□□ -0.57
CCDC78-216ENST00000544996 CLEC5AQ9NY25 188 aa11.46□□□□□ -0.57
CCDC78-216ENST00000544996 PTTG1O95997 202 aa11.45□□□□□ -0.58
CCDC78-216ENST00000544996 IGKV3-20P01619 116 aa11.45□□□□□ -0.58
CCDC78-216ENST00000544996 PET100P0DJ07 73 aa11.45□□□□□ -0.58
CCDC78-216ENST00000544996 DEFB1P60022 68 aa11.45□□□□□ -0.58
CCDC78-216ENST00000544996 EWSR1Q01844 656 aaKnown RBP eCLIP11.45□□□□□ -0.58
CCDC78-216ENST00000544996 PMS2P11Q13670 270 aa11.45□□□□□ -0.58
CCDC78-216ENST00000544996 MIC13Q5XKP0 118 aa11.45□□□□□ -0.58
CCDC78-216ENST00000544996 OR1L4Q8NGR5 311 aa11.45□□□□□ -0.58
CCDC78-216ENST00000544996 LRRC20Q8TCA0 184 aa11.45□□□□□ -0.58
CCDC78-216ENST00000544996 PPP1R1CQ8WVI7 109 aa11.45□□□□□ -0.58
CCDC78-216ENST00000544996 C17orf77Q96MU5 243 aa11.45□□□□□ -0.58
CCDC78-216ENST00000544996 CLUHP3Q96NS8 147 aa11.45□□□□□ -0.58
CCDC78-216ENST00000544996 DNAJC4Q9NNZ3 241 aa11.45□□□□□ -0.58
CCDC78-216ENST00000544996 OR5AC2Q9NZP5 309 aa11.45□□□□□ -0.58
CCDC78-216ENST00000544996 XCL2Q9UBD3 114 aa11.45□□□□□ -0.58
CCDC78-216ENST00000544996 MPDU1O75352 247 aa11.44□□□□□ -0.58
CCDC78-216ENST00000544996 MIFP14174 115 aa11.44□□□□□ -0.58
CCDC78-216ENST00000544996 FGF7P21781 194 aa11.44□□□□□ -0.58
CCDC78-216ENST00000544996 RPL29P47914 159 aaKnown RBP11.44□□□□□ -0.58
CCDC78-216ENST00000544996 NHLH2Q02577 135 aa11.44□□□□□ -0.58
CCDC78-216ENST00000544996 BPIFA4PQ86YQ2 179 aa11.44□□□□□ -0.58
CCDC78-216ENST00000544996 CSNK1G2-AS1Q8NCQ2 148 aa11.44□□□□□ -0.58
CCDC78-216ENST00000544996 OR5C1Q8NGR4 320 aa11.44□□□□□ -0.58
CCDC78-216ENST00000544996 CHAC2Q8WUX2 184 aa11.44□□□□□ -0.58
CCDC78-216ENST00000544996 TMEM37Q8WXS4 190 aa11.44□□□□□ -0.58
CCDC78-216ENST00000544996 C20orf173Q96LM9 149 aa11.44□□□□□ -0.58
CCDC78-216ENST00000544996 PFDN5Q99471 154 aa11.44□□□□□ -0.58
CCDC78-216ENST00000544996 DNAH7Q8WXX0 4024 aa11.44□□□□□ -0.58
CCDC78-216ENST00000544996 A0A087X0K7 114 aa11.43□□□□□ -0.58
CCDC78-216ENST00000544996 A0A0J9YX75 114 aa11.43□□□□□ -0.58
CCDC78-216ENST00000544996 NUPR2A6NF83 97 aa11.43□□□□□ -0.58
CCDC78-216ENST00000544996 ZNF705EA8MWA4 302 aaPredicted RBP11.43□□□□□ -0.58
CCDC78-216ENST00000544996 F6UB75 175 aa11.43□□□□□ -0.58
CCDC78-216ENST00000544996 H0YIZ8 118 aa11.43□□□□□ -0.58
CCDC78-216ENST00000544996 B2MP61769 119 aa11.43□□□□□ -0.58
CCDC78-216ENST00000544996 PRR20EP86478 221 aa11.43□□□□□ -0.58
CCDC78-216ENST00000544996 PRR20CP86479 221 aa11.43□□□□□ -0.58
CCDC78-216ENST00000544996 PRR20DP86480 221 aa11.43□□□□□ -0.58
CCDC78-216ENST00000544996 PRR20BP86481 221 aa11.43□□□□□ -0.58
CCDC78-216ENST00000544996 PRR20AP86496 221 aa11.43□□□□□ -0.58
CCDC78-216ENST00000544996 PSG9Q00887 426 aa11.43□□□□□ -0.58
CCDC78-216ENST00000544996 OPCMLQ14982 345 aa11.43□□□□□ -0.58
CCDC78-216ENST00000544996 FAM78BQ5VT40 261 aa11.43□□□□□ -0.58
CCDC78-216ENST00000544996 C11orf45Q8TAV5 145 aa11.43□□□□□ -0.58
CCDC78-216ENST00000544996 MFFQ9GZY8 342 aa11.43□□□□□ -0.58
CCDC78-216ENST00000544996 SLC39A9Q9NUM3 307 aa11.43□□□□□ -0.58
CCDC78-216ENST00000544996 TRAV8-2A0A0B4J237 113 aa11.42□□□□□ -0.58
CCDC78-216ENST00000544996 DEFB4AO15263 64 aa11.42□□□□□ -0.58
CCDC78-216ENST00000544996 DUSP14O95147 198 aaKnown RBP11.42□□□□□ -0.58
CCDC78-216ENST00000544996 IGFL4Q6B9Z1 124 aa11.42□□□□□ -0.58
CCDC78-216ENST00000544996 LCN15Q6UWW0 184 aa11.42□□□□□ -0.58
CCDC78-216ENST00000544996 RNF182Q8N6D2 247 aa11.42□□□□□ -0.58
CCDC78-216ENST00000544996 Q8NAQ8 132 aa11.42□□□□□ -0.58
CCDC78-216ENST00000544996 PXMP4Q9Y6I8 212 aa11.42□□□□□ -0.58
CCDC78-216ENST00000544996 IGHV4-28A0A0C4DH34 117 aa11.41□□□□□ -0.58
CCDC78-216ENST00000544996 LCE6AA0A183 80 aa11.41□□□□□ -0.58
CCDC78-216ENST00000544996 JTBO76095 146 aa11.41□□□□□ -0.58
CCDC78-216ENST00000544996 MPC2O95563 127 aa11.41□□□□□ -0.58
CCDC78-216ENST00000544996 CXCL2P19875 107 aa11.41□□□□□ -0.58
CCDC78-216ENST00000544996 FXYD7P58549 80 aa11.41□□□□□ -0.58
CCDC78-216ENST00000544996 CLINT1Q14677 625 aa11.41□□□□□ -0.58
CCDC78-216ENST00000544996 ZNF738Q8NE65 137 aa11.41□□□□□ -0.58
CCDC78-216ENST00000544996 NPCDR1Q9BY65 106 aa11.41□□□□□ -0.58
CCDC78-216ENST00000544996 ALG5Q9Y673 324 aa11.41□□□□□ -0.58
CCDC78-216ENST00000544996 X6R8D5 127 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms