RNA–Protein interactions for RNA: ENST00000544513.1

SEMA4D-224, Transcript of semaphorin 4D, humanhuman

TSL 5

Gene SEMA4D, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-224ENST00000544513 TMED4Q7Z7H5 227 aa9.78□□□□□ -0.84
SEMA4D-224ENST00000544513 OR11H7Q8NGC8 314 aa9.78□□□□□ -0.84
SEMA4D-224ENST00000544513 OR1B1Q8NGR6 318 aa9.78□□□□□ -0.84
SEMA4D-224ENST00000544513 SLC25A22Q9H936 323 aa9.78□□□□□ -0.84
SEMA4D-224ENST00000544513 BATF3Q9NR55 127 aa9.78□□□□□ -0.84
SEMA4D-224ENST00000544513 TMED3Q9Y3Q3 217 aa9.78□□□□□ -0.84
SEMA4D-224ENST00000544513 DNAH5Q8TE73 4624 aa9.77□□□□□ -0.84
SEMA4D-224ENST00000544513 LYRM9A8MSI8 78 aa9.77□□□□□ -0.85
SEMA4D-224ENST00000544513 DUSP14O95147 198 aaKnown RBP9.77□□□□□ -0.85
SEMA4D-224ENST00000544513 PRM2P04554 102 aa9.77□□□□□ -0.85
SEMA4D-224ENST00000544513 ORM2P19652 201 aa9.77□□□□□ -0.85
SEMA4D-224ENST00000544513 GATA2P23769 480 aaPredicted RBP9.77□□□□□ -0.85
SEMA4D-224ENST00000544513 TSPOP30536 169 aa9.77□□□□□ -0.85
SEMA4D-224ENST00000544513 FAUP35544 74 aaKnown RBP9.77□□□□□ -0.85
SEMA4D-224ENST00000544513 RPP30P78346 268 aaKnown RBP9.77□□□□□ -0.85
SEMA4D-224ENST00000544513 C15orf53Q8NAA6 179 aa9.77□□□□□ -0.85
SEMA4D-224ENST00000544513 BPIFCQ8NFQ6 507 aa9.77□□□□□ -0.85
SEMA4D-224ENST00000544513 TMEM208Q9BTX3 173 aa9.77□□□□□ -0.85
SEMA4D-224ENST00000544513 PAIP2BQ9ULR5 123 aaKnown RBP9.77□□□□□ -0.85
SEMA4D-224ENST00000544513 PLAC8L1A1L4L8 177 aa9.76□□□□□ -0.85
SEMA4D-224ENST00000544513 ZNF705GA8MUZ8 300 aaPredicted RBP9.76□□□□□ -0.85
SEMA4D-224ENST00000544513 H3BMQ9 156 aa9.76□□□□□ -0.85
SEMA4D-224ENST00000544513 ZNF701M0R085 212 aaPredicted RBP9.76□□□□□ -0.85
SEMA4D-224ENST00000544513 M0R2Z0 102 aa9.76□□□□□ -0.85
SEMA4D-224ENST00000544513 WRBO00258 174 aa9.76□□□□□ -0.85
SEMA4D-224ENST00000544513 INSP01308 110 aa9.76□□□□□ -0.85
SEMA4D-224ENST00000544513 VAMP1P23763 118 aa9.76□□□□□ -0.85
SEMA4D-224ENST00000544513 AP3S2P59780 193 aa9.76□□□□□ -0.85
SEMA4D-224ENST00000544513 B2MP61769 119 aa9.76□□□□□ -0.85
SEMA4D-224ENST00000544513 PPP1R1AQ13522 171 aa9.76□□□□□ -0.85
SEMA4D-224ENST00000544513 SPINK13Q1W4C9 94 aa9.76□□□□□ -0.85
SEMA4D-224ENST00000544513 IGFL4Q6B9Z1 124 aa9.76□□□□□ -0.85
SEMA4D-224ENST00000544513 ZNF575Q86XF7 245 aa9.76□□□□□ -0.85
SEMA4D-224ENST00000544513 SLC25A21Q9BQT8 299 aaPredicted RBP9.76□□□□□ -0.85
SEMA4D-224ENST00000544513 SHANK2-AS3Q9BTD1 123 aa9.76□□□□□ -0.85
SEMA4D-224ENST00000544513 TMEM147Q9BVK8 224 aa9.76□□□□□ -0.85
SEMA4D-224ENST00000544513 KRTAP4-5Q9BYR2 181 aa9.76□□□□□ -0.85
SEMA4D-224ENST00000544513 APOBP04114 4563 aaKnown RBP9.76□□□□□ -0.85
SEMA4D-224ENST00000544513 H3BRN7 92 aa9.75□□□□□ -0.85
SEMA4D-224ENST00000544513 SFT2D2O95562 160 aa9.75□□□□□ -0.85
SEMA4D-224ENST00000544513 S100A7P31151 101 aa9.75□□□□□ -0.85
SEMA4D-224ENST00000544513 SPANXN5Q5MJ07 72 aa9.75□□□□□ -0.85
SEMA4D-224ENST00000544513 ACOT7LQ6ZUV0 252 aa9.75□□□□□ -0.85
SEMA4D-224ENST00000544513 TMEM144Q7Z5S9 345 aa9.75□□□□□ -0.85
SEMA4D-224ENST00000544513 RNF182Q8N6D2 247 aa9.75□□□□□ -0.85
SEMA4D-224ENST00000544513 MCFD2Q8NI22 146 aa9.75□□□□□ -0.85
SEMA4D-224ENST00000544513 DEDD2Q8WXF8 326 aa9.75□□□□□ -0.85
SEMA4D-224ENST00000544513 SLC25A39Q9BZJ4 359 aaPredicted RBP9.75□□□□□ -0.85
SEMA4D-224ENST00000544513 V9GYH0 126 aa9.75□□□□□ -0.85
SEMA4D-224ENST00000544513 HOXB5P09067 269 aa9.74□□□□□ -0.85
SEMA4D-224ENST00000544513 AZU1P20160 251 aa9.74□□□□□ -0.85
SEMA4D-224ENST00000544513 PLP1P60201 277 aa9.74□□□□□ -0.85
SEMA4D-224ENST00000544513 ID3Q02535 119 aa9.74□□□□□ -0.85
SEMA4D-224ENST00000544513 BAP18Q8IXM2 172 aa9.74□□□□□ -0.85
SEMA4D-224ENST00000544513 TOMM5Q8N4H5 51 aa9.74□□□□□ -0.85
SEMA4D-224ENST00000544513 RBM38Q9H0Z9 239 aaKnown RBP9.74□□□□□ -0.85
SEMA4D-224ENST00000544513 STRAPQ9Y3F4 350 aaKnown RBP9.74□□□□□ -0.85
SEMA4D-224ENST00000544513 H3BP45 60 aa9.73□□□□□ -0.85
SEMA4D-224ENST00000544513 AKR1C1Q04828 323 aa9.73□□□□□ -0.85
SEMA4D-224ENST00000544513 PYDC2Q56P42 97 aa9.73□□□□□ -0.85
SEMA4D-224ENST00000544513 CYP2G1PQ6ZSU1 146 aa9.73□□□□□ -0.85
SEMA4D-224ENST00000544513 ZNRF2Q8NHG8 242 aa9.73□□□□□ -0.85
SEMA4D-224ENST00000544513 TRAV12-2A0A075B6T6 113 aa9.72□□□□□ -0.85
SEMA4D-224ENST00000544513 A0A087X0K7 114 aa9.72□□□□□ -0.85
SEMA4D-224ENST00000544513 NBDYA0A0U1RRE5 68 aa9.72□□□□□ -0.85
SEMA4D-224ENST00000544513 PMS2P5A8MQ11 134 aa9.72□□□□□ -0.85
SEMA4D-224ENST00000544513 BOLA2-SMG1P6H3BVE0 249 aa9.72□□□□□ -0.85
SEMA4D-224ENST00000544513 HYPMO75409 117 aa9.72□□□□□ -0.85
SEMA4D-224ENST00000544513 IL5P05113 134 aa9.72□□□□□ -0.85
SEMA4D-224ENST00000544513 DEFB130BP0DP73 79 aa9.72□□□□□ -0.85
SEMA4D-224ENST00000544513 DEFB130AP0DP74 79 aa9.72□□□□□ -0.85
SEMA4D-224ENST00000544513 RPL7P18124 248 aaKnown RBP9.72□□□□□ -0.85
SEMA4D-224ENST00000544513 CXCL3P19876 107 aa9.72□□□□□ -0.85
SEMA4D-224ENST00000544513 UBE2MP61081 183 aaKnown RBP9.72□□□□□ -0.85
SEMA4D-224ENST00000544513 FCN2Q15485 313 aa9.72□□□□□ -0.85
SEMA4D-224ENST00000544513 TMEM256Q8N2U0 113 aa9.72□□□□□ -0.85
SEMA4D-224ENST00000544513 OR8A1Q8NGG7 326 aa9.72□□□□□ -0.85
SEMA4D-224ENST00000544513 HIGD1AQ9Y241 93 aa9.72□□□□□ -0.85
SEMA4D-224ENST00000544513 A6NHS1 94 aa9.71□□□□□ -0.86
SEMA4D-224ENST00000544513 CBY3A6NI87 242 aa9.71□□□□□ -0.86
SEMA4D-224ENST00000544513 K7EPK0 472 aa9.71□□□□□ -0.86
SEMA4D-224ENST00000544513 TAS2R60P59551 318 aa9.71□□□□□ -0.86
SEMA4D-224ENST00000544513 SELENOTP62341 195 aa9.71□□□□□ -0.86
SEMA4D-224ENST00000544513 POLR2GP62487 172 aaKnown RBP eCLIP9.71□□□□□ -0.86
SEMA4D-224ENST00000544513 TNP2Q05952 138 aa9.71□□□□□ -0.86
SEMA4D-224ENST00000544513 ZNF738Q8NE65 137 aa9.71□□□□□ -0.86
SEMA4D-224ENST00000544513 ATG101Q9BSB4 218 aa9.71□□□□□ -0.86
SEMA4D-224ENST00000544513 F5H768 121 aa9.7□□□□□ -0.86
SEMA4D-224ENST00000544513 MRPS12O15235 138 aaKnown RBP9.7□□□□□ -0.86
SEMA4D-224ENST00000544513 ADAP1O75689 374 aa9.7□□□□□ -0.86
SEMA4D-224ENST00000544513 LINC00869P0C866 280 aa9.7□□□□□ -0.86
SEMA4D-224ENST00000544513 RAP2BP61225 183 aa9.7□□□□□ -0.86
SEMA4D-224ENST00000544513 FGL1Q08830 312 aa9.7□□□□□ -0.86
SEMA4D-224ENST00000544513 PSG3Q16557 428 aa9.7□□□□□ -0.86
SEMA4D-224ENST00000544513 PATE2Q6UY27 113 aa9.7□□□□□ -0.86
SEMA4D-224ENST00000544513 SMIM8Q96KF7 97 aa9.7□□□□□ -0.86
SEMA4D-224ENST00000544513 UHRF2Q96PU4 802 aa9.7□□□□□ -0.86
SEMA4D-224ENST00000544513 LINC01587Q99440 93 aa9.7□□□□□ -0.86
SEMA4D-224ENST00000544513 C9orf170A2RU37 121 aa9.69□□□□□ -0.86
SEMA4D-224ENST00000544513 FNDC10F2Z333 226 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms