RNA–Protein interactions for RNA: ENST00000544349.5

VPS33A-209, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS33A, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-209ENST00000544349 MOB4Q9Y3A3 225 aa11.23□□□□□ -0.61
VPS33A-209ENST00000544349 SVEP1Q4LDE5 3571 aa11.23□□□□□ -0.61
VPS33A-209ENST00000544349 POLQO75417 2590 aa11.23□□□□□ -0.61
VPS33A-209ENST00000544349 PEX7O00628 323 aa11.23□□□□□ -0.61
VPS33A-209ENST00000544349 OR1B1Q8NGR6 318 aa11.23□□□□□ -0.61
VPS33A-209ENST00000544349 CDC42EP3Q9UKI2 254 aa11.23□□□□□ -0.61
VPS33A-209ENST00000544349 ISLRO14498 428 aa11.22□□□□□ -0.61
VPS33A-209ENST00000544349 SERF1AO75920 110 aa11.22□□□□□ -0.61
VPS33A-209ENST00000544349 TENM4Q6N022 2769 aa11.22□□□□□ -0.61
VPS33A-209ENST00000544349 CMTM2Q8TAZ6 248 aa11.22□□□□□ -0.61
VPS33A-209ENST00000544349 SH2D7A6NKC9 451 aaPredicted RBP11.21□□□□□ -0.61
VPS33A-209ENST00000544349 H3BUX3 64 aa11.21□□□□□ -0.61
VPS33A-209ENST00000544349 ATP6V0E1O15342 81 aa11.21□□□□□ -0.61
VPS33A-209ENST00000544349 AMY1AP04745 511 aa11.21□□□□□ -0.61
VPS33A-209ENST00000544349 CD33P20138 364 aa11.21□□□□□ -0.61
VPS33A-209ENST00000544349 MYCNOSP40205 109 aa11.21□□□□□ -0.61
VPS33A-209ENST00000544349 RAB4BP61018 213 aa11.21□□□□□ -0.61
VPS33A-209ENST00000544349 LEMD1Q68G75 181 aa11.21□□□□□ -0.61
VPS33A-209ENST00000544349 MRPL54Q6P161 138 aaKnown RBP11.21□□□□□ -0.61
VPS33A-209ENST00000544349 BLNKQ8WV28 456 aa11.21□□□□□ -0.61
VPS33A-209ENST00000544349 A6NDX4 124 aa11.21□□□□□ -0.62
VPS33A-209ENST00000544349 H3BTX0 84 aa11.21□□□□□ -0.62
VPS33A-209ENST00000544349 IGLC1P0CG04 106 aa11.21□□□□□ -0.62
VPS33A-209ENST00000544349 CRISP2P16562 243 aa11.21□□□□□ -0.62
VPS33A-209ENST00000544349 TMEM136Q6ZRR5 245 aa11.21□□□□□ -0.62
VPS33A-209ENST00000544349 SGK494Q96LW2 274 aa11.21□□□□□ -0.62
VPS33A-209ENST00000544349 SERTAD4Q9NUC0 356 aa11.21□□□□□ -0.62
VPS33A-209ENST00000544349 SMIM27A0A1W2PRY6 76 aa11.2□□□□□ -0.62
VPS33A-209ENST00000544349 LINC01548A6NM66 108 aa11.2□□□□□ -0.62
VPS33A-209ENST00000544349 GATCO43716 136 aaKnown RBP11.2□□□□□ -0.62
VPS33A-209ENST00000544349 RANP62826 216 aaKnown RBP11.2□□□□□ -0.62
VPS33A-209ENST00000544349 LY6EQ16553 131 aa11.2□□□□□ -0.62
VPS33A-209ENST00000544349 UNQ5815/PRO19632Q6UWF5 114 aa11.2□□□□□ -0.62
VPS33A-209ENST00000544349 FAM110DQ8TAY7 271 aaPredicted RBP11.2□□□□□ -0.62
VPS33A-209ENST00000544349 TMEM68Q96MH6 324 aa11.2□□□□□ -0.62
VPS33A-209ENST00000544349 TMUB1Q9BVT8 246 aa11.2□□□□□ -0.62
VPS33A-209ENST00000544349 GP9P14770 177 aa11.2□□□□□ -0.62
VPS33A-209ENST00000544349 TAS2R60P59551 318 aa11.2□□□□□ -0.62
VPS33A-209ENST00000544349 ECSCRQ19T08 205 aa11.2□□□□□ -0.62
VPS33A-209ENST00000544349 KIAA1644Q3SXP7 199 aa11.2□□□□□ -0.62
VPS33A-209ENST00000544349 Q6ZWC4 215 aa11.2□□□□□ -0.62
VPS33A-209ENST00000544349 GNB1LQ9BYB4 327 aa11.2□□□□□ -0.62
VPS33A-209ENST00000544349 THYN1Q9P016 225 aa11.2□□□□□ -0.62
VPS33A-209ENST00000544349 NAT8BQ9UHF3 227 aa11.2□□□□□ -0.62
VPS33A-209ENST00000544349 REC114Q7Z4M0 266 aa11.19□□□□□ -0.62
VPS33A-209ENST00000544349 BCL6BQ8N143 479 aaPredicted RBP11.19□□□□□ -0.62
VPS33A-209ENST00000544349 MS4A10Q96PG2 267 aa11.19□□□□□ -0.62
VPS33A-209ENST00000544349 GNB4Q9HAV0 340 aa11.19□□□□□ -0.62
VPS33A-209ENST00000544349 RPH3ALQ9UNE2 315 aa11.19□□□□□ -0.62
VPS33A-209ENST00000544349 RNF114Q9Y508 228 aa11.19□□□□□ -0.62
VPS33A-209ENST00000544349 ABCA12Q86UK0 2595 aa11.19□□□□□ -0.62
VPS33A-209ENST00000544349 TRBV9A0A0B4J1U6 114 aa11.18□□□□□ -0.62
VPS33A-209ENST00000544349 A8MWP6 167 aa11.18□□□□□ -0.62
VPS33A-209ENST00000544349 NDUFB8O95169 186 aa11.18□□□□□ -0.62
VPS33A-209ENST00000544349 FSHBP01225 129 aa11.18□□□□□ -0.62
VPS33A-209ENST00000544349 KLK9Q2XQG4 91 aa11.18□□□□□ -0.62
VPS33A-209ENST00000544349 CYB5R2Q6BCY4 276 aa11.18□□□□□ -0.62
VPS33A-209ENST00000544349 PRR27Q6MZM9 219 aa11.18□□□□□ -0.62
VPS33A-209ENST00000544349 LURAP1LQ8IV03 231 aa11.18□□□□□ -0.62
VPS33A-209ENST00000544349 WFDC11Q8NEX6 87 aa11.18□□□□□ -0.62
VPS33A-209ENST00000544349 KLK9Q9UKQ9 250 aa11.18□□□□□ -0.62
VPS33A-209ENST00000544349 PRRC2AP48634 2157 aaKnown RBP11.18□□□□□ -0.62
VPS33A-209ENST00000544349 NAV2Q8IVL1 2488 aa11.18□□□□□ -0.62
VPS33A-209ENST00000544349 OR2J3O76001 311 aa11.18□□□□□ -0.62
VPS33A-209ENST00000544349 SCGB1D1O95968 90 aa11.18□□□□□ -0.62
VPS33A-209ENST00000544349 IGKV1-17P01599 117 aa11.18□□□□□ -0.62
VPS33A-209ENST00000544349 ESDP10768 282 aa11.18□□□□□ -0.62
VPS33A-209ENST00000544349 PSG1P11464 419 aa11.18□□□□□ -0.62
VPS33A-209ENST00000544349 PLP1P60201 277 aa11.18□□□□□ -0.62
VPS33A-209ENST00000544349 IQCJQ1A5X6 159 aa11.18□□□□□ -0.62
VPS33A-209ENST00000544349 DEFB112Q30KQ8 113 aa11.18□□□□□ -0.62
VPS33A-209ENST00000544349 BAGE2Q86Y30 109 aa11.18□□□□□ -0.62
VPS33A-209ENST00000544349 S4R3C0 116 aa11.18□□□□□ -0.62
VPS33A-209ENST00000544349 CENPEQ02224 2701 aa11.17□□□□□ -0.62
VPS33A-209ENST00000544349 G3V318 75 aa11.17□□□□□ -0.62
VPS33A-209ENST00000544349 SLC25A5P05141 298 aaKnown RBP11.17□□□□□ -0.62
VPS33A-209ENST00000544349 MFAP4P55083 255 aa11.17□□□□□ -0.62
VPS33A-209ENST00000544349 Q71RC1 249 aaPredicted RBP11.17□□□□□ -0.62
VPS33A-209ENST00000544349 ZNF48Q96MX3 618 aaPredicted RBP11.17□□□□□ -0.62
VPS33A-209ENST00000544349 RCHY1Q96PM5 261 aa11.17□□□□□ -0.62
VPS33A-209ENST00000544349 NAGKQ9UJ70 344 aa11.17□□□□□ -0.62
VPS33A-209ENST00000544349 APCP25054 2843 aa11.17□□□□□ -0.62
VPS33A-209ENST00000544349 M0QZK8 103 aa11.17□□□□□ -0.62
VPS33A-209ENST00000544349 BMPR1BO00238 502 aa11.17□□□□□ -0.62
VPS33A-209ENST00000544349 HYPMO75409 117 aa11.17□□□□□ -0.62
VPS33A-209ENST00000544349 BAGE3Q86Y29 109 aa11.17□□□□□ -0.62
VPS33A-209ENST00000544349 NUDT10Q8NFP7 164 aa11.17□□□□□ -0.62
VPS33A-209ENST00000544349 NUDT11Q96G61 164 aa11.17□□□□□ -0.62
VPS33A-209ENST00000544349 C21orf62Q9NYP8 219 aa11.17□□□□□ -0.62
VPS33A-209ENST00000544349 FBXL7Q9UJT9 491 aa11.17□□□□□ -0.62
VPS33A-209ENST00000544349 NBPF19A0A087WUL8 3843 aa11.16□□□□□ -0.62
VPS33A-209ENST00000544349 TRAV30A0A087WSZ9 112 aa11.16□□□□□ -0.62
VPS33A-209ENST00000544349 IZUMO1RA6ND01 250 aa11.16□□□□□ -0.62
VPS33A-209ENST00000544349 F8W735 103 aaPredicted RBP11.16□□□□□ -0.62
VPS33A-209ENST00000544349 GNG7O60262 68 aa11.16□□□□□ -0.62
VPS33A-209ENST00000544349 CRIP2P52943 208 aaPredicted RBP11.16□□□□□ -0.62
VPS33A-209ENST00000544349 LYZP61626 148 aa11.16□□□□□ -0.62
VPS33A-209ENST00000544349 Q0VG73 95 aa11.16□□□□□ -0.62
VPS33A-209ENST00000544349 TMEM183BQ1AE95 376 aa11.16□□□□□ -0.62
VPS33A-209ENST00000544349 PRR31Q5SQ13 230 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms