RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 TRAV12-1A0A0B4J245 112 aa8.51□□□□□ -1.05
PCDH9-204ENST00000544246 C22orf46C9J442 243 aa8.51□□□□□ -1.05
PCDH9-204ENST00000544246 GAGE1Q13065 139 aa8.51□□□□□ -1.05
PCDH9-204ENST00000544246 LYPD1Q8N2G4 141 aa8.51□□□□□ -1.05
PCDH9-204ENST00000544246 MGAMO43451 1857 aa8.51□□□□□ -1.05
PCDH9-204ENST00000544246 LYZL4Q96KX0 146 aa8.51□□□□□ -1.05
PCDH9-204ENST00000544246 RP1L1Q8IWN7 2480 aaPredicted RBP8.51□□□□□ -1.05
PCDH9-204ENST00000544246 OOSP1A8MZH6 123 aa8.51□□□□□ -1.05
PCDH9-204ENST00000544246 IGHV1-46P01743 117 aa8.51□□□□□ -1.05
PCDH9-204ENST00000544246 MSRB2Q9Y3D2 182 aa8.51□□□□□ -1.05
PCDH9-204ENST00000544246 SHISA3A0PJX4 238 aa8.51□□□□□ -1.05
PCDH9-204ENST00000544246 NBL1P41271 181 aa8.51□□□□□ -1.05
PCDH9-204ENST00000544246 DAD1P61803 113 aa8.51□□□□□ -1.05
PCDH9-204ENST00000544246 F5H768 121 aa8.51□□□□□ -1.05
PCDH9-204ENST00000544246 AGMATQ9BSE5 352 aa8.51□□□□□ -1.05
PCDH9-204ENST00000544246 RPUSD1Q9UJJ7 312 aaKnown RBP8.51□□□□□ -1.05
PCDH9-204ENST00000544246 TP53TG1Q9Y2A0 90 aa8.51□□□□□ -1.05
PCDH9-204ENST00000544246 GAGE12JA6NER3 117 aa8.5□□□□□ -1.05
PCDH9-204ENST00000544246 EGR2P11161 476 aaPredicted RBP8.5□□□□□ -1.05
PCDH9-204ENST00000544246 GAGE4Q13068 117 aa8.5□□□□□ -1.05
PCDH9-204ENST00000544246 GAGE5Q13069 117 aa8.5□□□□□ -1.05
PCDH9-204ENST00000544246 KLRD1Q13241 179 aa8.5□□□□□ -1.05
PCDH9-204ENST00000544246 ANXA2RQ3ZCQ2 193 aa8.5□□□□□ -1.05
PCDH9-204ENST00000544246 LINC01551Q86U37 167 aa8.5□□□□□ -1.05
PCDH9-204ENST00000544246 PCM1Q15154 2024 aa8.5□□□□□ -1.05
PCDH9-204ENST00000544246 GAGE6Q13070 117 aa8.5□□□□□ -1.05
PCDH9-204ENST00000544246 ZNF837Q96EG3 531 aaPredicted RBP8.5□□□□□ -1.05
PCDH9-204ENST00000544246 GFRA4Q9GZZ7 299 aa8.5□□□□□ -1.05
PCDH9-204ENST00000544246 I3L3M4 83 aa8.5□□□□□ -1.05
PCDH9-204ENST00000544246 IGHV1-8P0DP01 117 aa8.5□□□□□ -1.05
PCDH9-204ENST00000544246 MORN5Q5VZ52 161 aa8.5□□□□□ -1.05
PCDH9-204ENST00000544246 TMEM200BQ69YZ2 307 aa8.5□□□□□ -1.05
PCDH9-204ENST00000544246 AMN1Q8IY45 258 aa8.5□□□□□ -1.05
PCDH9-204ENST00000544246 RFNGQ9Y644 331 aa8.5□□□□□ -1.05
PCDH9-204ENST00000544246 CSRP1P21291 193 aaKnown RBP8.5□□□□□ -1.05
PCDH9-204ENST00000544246 EFNA4P52798 201 aa8.5□□□□□ -1.05
PCDH9-204ENST00000544246 FOXG1P55316 489 aaPredicted RBP8.5□□□□□ -1.05
PCDH9-204ENST00000544246 LY6G6FQ5SQ64 297 aa8.5□□□□□ -1.05
PCDH9-204ENST00000544246 ZNF329Q86UD4 541 aa8.5□□□□□ -1.05
PCDH9-204ENST00000544246 ZNF236Q9UL36 1845 aa8.49□□□□□ -1.05
PCDH9-204ENST00000544246 TMEM256Q8N2U0 113 aa8.49□□□□□ -1.05
PCDH9-204ENST00000544246 NUP205Q92621 2012 aa8.49□□□□□ -1.05
PCDH9-204ENST00000544246 TRAV1-1A0A0B4J248 108 aa8.49□□□□□ -1.05
PCDH9-204ENST00000544246 C10orf55Q5SWW7 151 aa8.49□□□□□ -1.05
PCDH9-204ENST00000544246 IGFL4Q6B9Z1 124 aa8.49□□□□□ -1.05
PCDH9-204ENST00000544246 COLCA2A8K830 154 aa8.49□□□□□ -1.05
PCDH9-204ENST00000544246 NDUFC2O95298 119 aa8.49□□□□□ -1.05
PCDH9-204ENST00000544246 RHPN1-AS1Q9BWJ2 59 aa8.49□□□□□ -1.05
PCDH9-204ENST00000544246 TSSC4Q9Y5U2 329 aaPredicted RBP8.49□□□□□ -1.05
PCDH9-204ENST00000544246 FAM231BA6NCW3 169 aa8.49□□□□□ -1.05
PCDH9-204ENST00000544246 CLPSP04118 112 aa8.49□□□□□ -1.05
PCDH9-204ENST00000544246 ZNF883P0CG24 379 aa8.49□□□□□ -1.05
PCDH9-204ENST00000544246 ZCCHC24Q8N2G6 241 aaKnown RBP8.49□□□□□ -1.05
PCDH9-204ENST00000544246 H0YIZ8 118 aa8.49□□□□□ -1.05
PCDH9-204ENST00000544246 H3BUX3 64 aa8.49□□□□□ -1.05
PCDH9-204ENST00000544246 RHODO00212 210 aa8.49□□□□□ -1.05
PCDH9-204ENST00000544246 ZNF672Q499Z4 452 aaPredicted RBP8.49□□□□□ -1.05
PCDH9-204ENST00000544246 TRAV13-2A0A0B4J235 113 aa8.48□□□□□ -1.05
PCDH9-204ENST00000544246 RBBP6Q7Z6E9 1792 aaKnown RBP8.48□□□□□ -1.05
PCDH9-204ENST00000544246 B4DSR2 109 aa8.48□□□□□ -1.05
PCDH9-204ENST00000544246 E9PLN8 166 aa8.48□□□□□ -1.05
PCDH9-204ENST00000544246 CFHR3Q02985 330 aa8.48□□□□□ -1.05
PCDH9-204ENST00000544246 A0A1W2PR77 199 aa8.48□□□□□ -1.05
PCDH9-204ENST00000544246 NXPH4O95158 308 aa8.48□□□□□ -1.05
PCDH9-204ENST00000544246 Q86TA4 180 aa8.48□□□□□ -1.05
PCDH9-204ENST00000544246 TRIP11Q15643 1979 aa8.48□□□□□ -1.05
PCDH9-204ENST00000544246 SCN3AQ9NY46 2000 aa8.48□□□□□ -1.05
PCDH9-204ENST00000544246 F8W1H4 67 aa8.48□□□□□ -1.05
PCDH9-204ENST00000544246 C3orf56Q8N813 242 aa8.48□□□□□ -1.05
PCDH9-204ENST00000544246 M0R1W7 72 aa8.48□□□□□ -1.05
PCDH9-204ENST00000544246 SLC25A16P16260 332 aa8.48□□□□□ -1.05
PCDH9-204ENST00000544246 BTCP35070 178 aa8.47□□□□□ -1.05
PCDH9-204ENST00000544246 LAIR2Q6ISS4 152 aa8.47□□□□□ -1.05
PCDH9-204ENST00000544246 LINC00114Q6XXX2 140 aa8.47□□□□□ -1.05
PCDH9-204ENST00000544246 GLRX5Q86SX6 157 aa8.47□□□□□ -1.05
PCDH9-204ENST00000544246 STPG4Q8N801 248 aa8.47□□□□□ -1.05
PCDH9-204ENST00000544246 MCRIP2Q9BUT9 160 aaKnown RBP8.47□□□□□ -1.05
PCDH9-204ENST00000544246 SCN5AQ14524 2016 aa8.47□□□□□ -1.05
PCDH9-204ENST00000544246 SCN1AP35498 2009 aa8.47□□□□□ -1.05
PCDH9-204ENST00000544246 A0A1W2PPI3 338 aa8.47□□□□□ -1.05
PCDH9-204ENST00000544246 C20orf204Q6ZNR8 217 aa8.47□□□□□ -1.05
PCDH9-204ENST00000544246 OR11H6Q8NGC7 330 aa8.47□□□□□ -1.05
PCDH9-204ENST00000544246 C9orf118A6NHY6 69 aa8.47□□□□□ -1.05
PCDH9-204ENST00000544246 FGF6P10767 208 aa8.47□□□□□ -1.05
PCDH9-204ENST00000544246 GAS1P54826 345 aa8.47□□□□□ -1.05
PCDH9-204ENST00000544246 C5orf64Q2M2E5 130 aa8.47□□□□□ -1.05
PCDH9-204ENST00000544246 CARD19Q96LW7 228 aa8.47□□□□□ -1.05
PCDH9-204ENST00000544246 PRSS29PA6NIE9 313 aa8.47□□□□□ -1.05
PCDH9-204ENST00000544246 DKK1O94907 266 aa8.47□□□□□ -1.05
PCDH9-204ENST00000544246 AZU1P20160 251 aa8.47□□□□□ -1.05
PCDH9-204ENST00000544246 SLAQ13239 276 aa8.47□□□□□ -1.05
PCDH9-204ENST00000544246 ANKRD29Q8N6D5 301 aa8.47□□□□□ -1.05
PCDH9-204ENST00000544246 DAZ1Q9NQZ3 744 aaKnown RBP8.47□□□□□ -1.05
PCDH9-204ENST00000544246 FOCADQ5VW36 1801 aa8.47□□□□□ -1.05
PCDH9-204ENST00000544246 A0A0A6YYD4 124 aa8.47□□□□□ -1.05
PCDH9-204ENST00000544246 TINCRA0A1B0GVN0 87 aa8.47□□□□□ -1.05
PCDH9-204ENST00000544246 H0YJW9 148 aa8.47□□□□□ -1.05
PCDH9-204ENST00000544246 MDS2Q8NDY4 140 aa8.47□□□□□ -1.05
PCDH9-204ENST00000544246 TMEM243Q9BU79 118 aa8.47□□□□□ -1.05
PCDH9-204ENST00000544246 ARMS2P0C7Q2 107 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms