RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 COX6A1P12074 109 aa7.17□□□□□ -1.26
VPS13D-212ENST00000543766 ZNF793Q6ZN11 406 aa7.17□□□□□ -1.26
VPS13D-212ENST00000543766 ZIC3O60481 467 aa7.16□□□□□ -1.26
VPS13D-212ENST00000543766 PLAUP00749 431 aa7.16□□□□□ -1.26
VPS13D-212ENST00000543766 EBLN2Q6P2I7 272 aa7.16□□□□□ -1.26
VPS13D-212ENST00000543766 PIP4P2Q8N4L2 257 aa7.16□□□□□ -1.26
VPS13D-212ENST00000543766 LINC00479Q96M42 142 aa7.16□□□□□ -1.26
VPS13D-212ENST00000543766 AMMECR1Q9Y4X0 333 aaPredicted RBP7.16□□□□□ -1.26
VPS13D-212ENST00000543766 LAMA1P25391 3075 aa7.16□□□□□ -1.26
VPS13D-212ENST00000543766 PSPNO60542 156 aa7.16□□□□□ -1.26
VPS13D-212ENST00000543766 LOXP28300 417 aaPredicted RBP7.16□□□□□ -1.26
VPS13D-212ENST00000543766 LY6DQ14210 128 aa7.16□□□□□ -1.26
VPS13D-212ENST00000543766 SS18Q15532 418 aa7.16□□□□□ -1.26
VPS13D-212ENST00000543766 ORMDL2Q53FV1 153 aa7.16□□□□□ -1.26
VPS13D-212ENST00000543766 WDR38Q5JTN6 314 aa7.16□□□□□ -1.26
VPS13D-212ENST00000543766 LINC00305Q7Z4B0 112 aa7.16□□□□□ -1.26
VPS13D-212ENST00000543766 SSMEM1Q8WWF3 244 aa7.16□□□□□ -1.26
VPS13D-212ENST00000543766 LEPROTL1O95214 131 aa7.16□□□□□ -1.26
VPS13D-212ENST00000543766 TNFP01375 233 aa7.16□□□□□ -1.26
VPS13D-212ENST00000543766 TMEM258P61165 79 aa7.16□□□□□ -1.26
VPS13D-212ENST00000543766 PCBD1P61457 104 aa7.16□□□□□ -1.26
VPS13D-212ENST00000543766 PLEKHB2Q96CS7 222 aa7.16□□□□□ -1.26
VPS13D-212ENST00000543766 LINC00526Q96FQ7 95 aa7.16□□□□□ -1.26
VPS13D-212ENST00000543766 MDFIQ99750 246 aa7.16□□□□□ -1.26
VPS13D-212ENST00000543766 CPAMD8Q8IZJ3 1885 aa7.16□□□□□ -1.26
VPS13D-212ENST00000543766 C4orf51C9J302 202 aa7.15□□□□□ -1.26
VPS13D-212ENST00000543766 LINC00310P59036 64 aa7.15□□□□□ -1.26
VPS13D-212ENST00000543766 NMNAT3Q96T66 252 aa7.15□□□□□ -1.26
VPS13D-212ENST00000543766 AGMATQ9BSE5 352 aa7.15□□□□□ -1.26
VPS13D-212ENST00000543766 SIT1Q9Y3P8 196 aa7.15□□□□□ -1.26
VPS13D-212ENST00000543766 VPS13AQ96RL7 3174 aa7.15□□□□□ -1.26
VPS13D-212ENST00000543766 ASIPP42127 132 aa7.15□□□□□ -1.26
VPS13D-212ENST00000543766 NPC2P61916 151 aa7.15□□□□□ -1.26
VPS13D-212ENST00000543766 SNRPD3P62318 126 aaKnown RBP7.15□□□□□ -1.26
VPS13D-212ENST00000543766 CYP2G1PQ6ZSU1 146 aa7.15□□□□□ -1.26
VPS13D-212ENST00000543766 TEN1Q86WV5 123 aa7.15□□□□□ -1.26
VPS13D-212ENST00000543766 GTSF1Q8WW33 167 aa7.15□□□□□ -1.26
VPS13D-212ENST00000543766 AP5S1Q9NUS5 200 aa7.15□□□□□ -1.26
VPS13D-212ENST00000543766 HIGD1BQ9P298 99 aa7.15□□□□□ -1.26
VPS13D-212ENST00000543766 SRSF10O75494 262 aaKnown RBP7.15□□□□□ -1.27
VPS13D-212ENST00000543766 PAX8Q06710 450 aa7.15□□□□□ -1.27
VPS13D-212ENST00000543766 OR9G1Q8NH87 305 aa7.15□□□□□ -1.27
VPS13D-212ENST00000543766 WFDC5Q8TCV5 224 aa7.15□□□□□ -1.27
VPS13D-212ENST00000543766 TMEM133Q9H2Q1 129 aa7.15□□□□□ -1.27
VPS13D-212ENST00000543766 PHF3Q92576 2039 aaKnown RBP7.14□□□□□ -1.27
VPS13D-212ENST00000543766 HAX1O00165 279 aa7.14□□□□□ -1.27
VPS13D-212ENST00000543766 PCP2Q8IVA1 136 aa7.14□□□□□ -1.27
VPS13D-212ENST00000543766 MPLKIPQ8TAP9 179 aa7.14□□□□□ -1.27
VPS13D-212ENST00000543766 SCRT2Q9NQ03 307 aa7.14□□□□□ -1.27
VPS13D-212ENST00000543766 SDK1Q7Z5N4 2213 aa7.14□□□□□ -1.27
VPS13D-212ENST00000543766 PLAC8L1A1L4L8 177 aa7.14□□□□□ -1.27
VPS13D-212ENST00000543766 TCL1BO95988 128 aa7.14□□□□□ -1.27
VPS13D-212ENST00000543766 COX8AP10176 69 aa7.14□□□□□ -1.27
VPS13D-212ENST00000543766 GFERP55789 205 aa7.14□□□□□ -1.27
VPS13D-212ENST00000543766 MORN3Q6PF18 240 aaPredicted RBP7.14□□□□□ -1.27
VPS13D-212ENST00000543766 DGAT2L6Q6ZPD8 337 aa7.14□□□□□ -1.27
VPS13D-212ENST00000543766 IGF2BP2-AS1Q96M15 143 aa7.14□□□□□ -1.27
VPS13D-212ENST00000543766 IGHV5-51A0A0C4DH38 117 aa7.14□□□□□ -1.27
VPS13D-212ENST00000543766 PGPA6NDG6 321 aa7.14□□□□□ -1.27
VPS13D-212ENST00000543766 FAM90A26D6RGX4 464 aa7.14□□□□□ -1.27
VPS13D-212ENST00000543766 DAD1P61803 113 aa7.14□□□□□ -1.27
VPS13D-212ENST00000543766 S1PR3Q99500 378 aa7.14□□□□□ -1.27
VPS13D-212ENST00000543766 DNAJB12Q9NXW2 375 aaKnown RBP7.14□□□□□ -1.27
VPS13D-212ENST00000543766 NCBP2LA6PVI3 153 aaKnown RBP7.13□□□□□ -1.27
VPS13D-212ENST00000543766 ARFRP1Q13795 201 aa7.13□□□□□ -1.27
VPS13D-212ENST00000543766 SLC48A1Q6P1K1 146 aa7.13□□□□□ -1.27
VPS13D-212ENST00000543766 BDP1A6H8Y1 2624 aa7.13□□□□□ -1.27
VPS13D-212ENST00000543766 SPTBN2O15020 2390 aa7.13□□□□□ -1.27
VPS13D-212ENST00000543766 A0A1B0GVT2 93 aa7.13□□□□□ -1.27
VPS13D-212ENST00000543766 IGLL5B9A064 214 aa7.13□□□□□ -1.27
VPS13D-212ENST00000543766 IGKCP01834 107 aa7.13□□□□□ -1.27
VPS13D-212ENST00000543766 IL4P05112 153 aa7.13□□□□□ -1.27
VPS13D-212ENST00000543766 OR5AL1P0C617 328 aa7.13□□□□□ -1.27
VPS13D-212ENST00000543766 UBE2L3P68036 154 aaKnown RBP7.13□□□□□ -1.27
VPS13D-212ENST00000543766 TAS2R4Q9NYW5 299 aa7.13□□□□□ -1.27
VPS13D-212ENST00000543766 HOXA3O43365 443 aaPredicted RBP7.13□□□□□ -1.27
VPS13D-212ENST00000543766 ATP6V0E2Q8NHE4 81 aa7.13□□□□□ -1.27
VPS13D-212ENST00000543766 AGPAT4-IT1Q9H0P7 198 aa7.13□□□□□ -1.27
VPS13D-212ENST00000543766 CALYQ9NYX4 217 aa7.13□□□□□ -1.27
VPS13D-212ENST00000543766 MUC22E2RYF6 1773 aaPredicted RBP7.13□□□□□ -1.27
VPS13D-212ENST00000543766 A0A0A6YYD4 124 aa7.12□□□□□ -1.27
VPS13D-212ENST00000543766 HOXD3P31249 432 aaPredicted RBP7.12□□□□□ -1.27
VPS13D-212ENST00000543766 FXYD2P54710 66 aa7.12□□□□□ -1.27
VPS13D-212ENST00000543766 PLPP4Q5VZY2 271 aa7.12□□□□□ -1.27
VPS13D-212ENST00000543766 Q6Q795 121 aa7.12□□□□□ -1.27
VPS13D-212ENST00000543766 SFTPA2Q8IWL1 248 aa7.12□□□□□ -1.27
VPS13D-212ENST00000543766 SFTPA1Q8IWL2 248 aa7.12□□□□□ -1.27
VPS13D-212ENST00000543766 ODF3L1Q8IXM7 274 aa7.12□□□□□ -1.27
VPS13D-212ENST00000543766 FOXB1Q99853 325 aa7.12□□□□□ -1.27
VPS13D-212ENST00000543766 C6orf106Q9H6K1 298 aaPredicted RBP7.12□□□□□ -1.27
VPS13D-212ENST00000543766 RPRMQ9NS64 109 aa7.12□□□□□ -1.27
VPS13D-212ENST00000543766 RBM12B-AS1Q9P1G2 102 aa7.12□□□□□ -1.27
VPS13D-212ENST00000543766 DNAJC13O75165 2243 aa7.12□□□□□ -1.27
VPS13D-212ENST00000543766 SSSCA1O60232 199 aa7.12□□□□□ -1.27
VPS13D-212ENST00000543766 HLA-DQA1P01909 254 aa7.12□□□□□ -1.27
VPS13D-212ENST00000543766 FHL5Q5TD97 284 aa7.12□□□□□ -1.27
VPS13D-212ENST00000543766 MIC13Q5XKP0 118 aa7.12□□□□□ -1.27
VPS13D-212ENST00000543766 A0A1B0GWA3 101 aa7.12□□□□□ -1.27
VPS13D-212ENST00000543766 TMEM14DPA8MWL7 114 aa7.12□□□□□ -1.27
VPS13D-212ENST00000543766 FBXL14Q8N1E6 418 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms