RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 C16orf92Q96LL3 132 aa4.74□□□□□ -1.65
LTBR-212ENST00000543542 ARPC5LQ9BPX5 153 aa4.74□□□□□ -1.65
LTBR-212ENST00000543542 SHANK2-AS3Q9BTD1 123 aa4.74□□□□□ -1.65
LTBR-212ENST00000543542 PARD6GQ9BYG4 376 aaPredicted RBP4.74□□□□□ -1.65
LTBR-212ENST00000543542 SLC25A32Q9H2D1 315 aa4.74□□□□□ -1.65
LTBR-212ENST00000543542 NRN1Q9NPD7 142 aa4.74□□□□□ -1.65
LTBR-212ENST00000543542 U3KQE9 123 aa4.74□□□□□ -1.65
LTBR-212ENST00000543542 TRAV2A0A0B4J234 112 aa4.73□□□□□ -1.65
LTBR-212ENST00000543542 A0A1W2PPV4 95 aa4.73□□□□□ -1.65
LTBR-212ENST00000543542 G3V3Q6 166 aa4.73□□□□□ -1.65
LTBR-212ENST00000543542 JTBO76095 146 aa4.73□□□□□ -1.65
LTBR-212ENST00000543542 C1QBP02746 253 aa4.73□□□□□ -1.65
LTBR-212ENST00000543542 ZNF688P0C7X2 276 aa4.73□□□□□ -1.65
LTBR-212ENST00000543542 C4BPBP20851 252 aa4.73□□□□□ -1.65
LTBR-212ENST00000543542 ATP6V0CP27449 155 aa4.73□□□□□ -1.65
LTBR-212ENST00000543542 MEOX2P50222 304 aa4.73□□□□□ -1.65
LTBR-212ENST00000543542 DEFB131AP59861 70 aa4.73□□□□□ -1.65
LTBR-212ENST00000543542 RHOBP62745 196 aa4.73□□□□□ -1.65
LTBR-212ENST00000543542 ZNF345Q14585 488 aa4.73□□□□□ -1.65
LTBR-212ENST00000543542 ZFP69Q49AA0 526 aa4.73□□□□□ -1.65
LTBR-212ENST00000543542 RPL7L1Q6DKI1 246 aaKnown RBP4.73□□□□□ -1.65
LTBR-212ENST00000543542 FAM122CQ6P4D5 195 aa4.73□□□□□ -1.65
LTBR-212ENST00000543542 KCNRGQ8N5I3 272 aa4.73□□□□□ -1.65
LTBR-212ENST00000543542 DEFB125Q8N687 156 aa4.73□□□□□ -1.65
LTBR-212ENST00000543542 OR11H4Q8NGC9 324 aa4.73□□□□□ -1.65
LTBR-212ENST00000543542 OR2G3Q8NGZ4 309 aa4.73□□□□□ -1.65
LTBR-212ENST00000543542 TMEM37Q8WXS4 190 aa4.73□□□□□ -1.65
LTBR-212ENST00000543542 GNPNAT1Q96EK6 184 aaPredicted RBP4.73□□□□□ -1.65
LTBR-212ENST00000543542 HYLS1Q96M11 299 aa4.73□□□□□ -1.65
LTBR-212ENST00000543542 LINC00052Q96N35 136 aa4.73□□□□□ -1.65
LTBR-212ENST00000543542 ZNF471Q9BX82 626 aaPredicted RBP4.73□□□□□ -1.65
LTBR-212ENST00000543542 SRD5A3Q9H8P0 318 aa4.73□□□□□ -1.65
LTBR-212ENST00000543542 TIMM9Q9Y5J7 89 aa4.73□□□□□ -1.65
LTBR-212ENST00000543542 TRAV5A0A0B4J249 113 aa4.72□□□□□ -1.65
LTBR-212ENST00000543542 K7EQG2 157 aa4.72□□□□□ -1.65
LTBR-212ENST00000543542 BCL2L11O43521 198 aa4.72□□□□□ -1.65
LTBR-212ENST00000543542 OR7C2O60412 319 aa4.72□□□□□ -1.65
LTBR-212ENST00000543542 MBP02144 154 aa4.72□□□□□ -1.65
LTBR-212ENST00000543542 SNRPCP09234 159 aaKnown RBP4.72□□□□□ -1.65
LTBR-212ENST00000543542 IGHV4-30-4P0DP06 118 aa4.72□□□□□ -1.65
LTBR-212ENST00000543542 CXCL2P19875 107 aa4.72□□□□□ -1.65
LTBR-212ENST00000543542 M6PRP20645 277 aa4.72□□□□□ -1.65
LTBR-212ENST00000543542 TAS2R45P59539 299 aa4.72□□□□□ -1.65
LTBR-212ENST00000543542 EIF5AP63241 154 aaKnown RBP4.72□□□□□ -1.65
LTBR-212ENST00000543542 GCSAMLQ5JQS6 135 aa4.72□□□□□ -1.65
LTBR-212ENST00000543542 PSMG4Q5JS54 123 aa4.72□□□□□ -1.65
LTBR-212ENST00000543542 AKR1C8PQ5T2L2 129 aa4.72□□□□□ -1.65
LTBR-212ENST00000543542 SAMD13Q5VXD3 122 aa4.72□□□□□ -1.65
LTBR-212ENST00000543542 TMUB2Q71RG4 321 aa4.72□□□□□ -1.65
LTBR-212ENST00000543542 MIR17HGQ75NE6 70 aa4.72□□□□□ -1.65
LTBR-212ENST00000543542 APRG1Q8IVJ8 170 aa4.72□□□□□ -1.65
LTBR-212ENST00000543542 STHQ8IWL8 128 aa4.72□□□□□ -1.65
LTBR-212ENST00000543542 Q8N1Y9 231 aa4.72□□□□□ -1.65
LTBR-212ENST00000543542 OR10G4Q8NGN3 311 aa4.72□□□□□ -1.65
LTBR-212ENST00000543542 OR10G9Q8NGN4 311 aa4.72□□□□□ -1.65
LTBR-212ENST00000543542 OR10G7Q8NGN6 311 aa4.72□□□□□ -1.65
LTBR-212ENST00000543542 BLNKQ8WV28 456 aa4.72□□□□□ -1.65
LTBR-212ENST00000543542 PSMG3Q9BT73 122 aaPredicted RBP4.72□□□□□ -1.65
LTBR-212ENST00000543542 MRPL32Q9BYC8 188 aaKnown RBP4.72□□□□□ -1.65
LTBR-212ENST00000543542 WFDC10AQ9H1F0 79 aa4.72□□□□□ -1.65
LTBR-212ENST00000543542 MAP6D1Q9H9H5 199 aa4.72□□□□□ -1.65
LTBR-212ENST00000543542 FUT9Q9Y231 359 aa4.72□□□□□ -1.65
LTBR-212ENST00000543542 RFNGQ9Y644 331 aa4.72□□□□□ -1.65
LTBR-212ENST00000543542 NBEAL1Q6ZS30 2694 aa4.72□□□□□ -1.65
LTBR-212ENST00000543542 LOC102724200A0A096LPH7 203 aaPredicted RBP4.71□□□□□ -1.66
LTBR-212ENST00000543542 H3BTX0 84 aa4.71□□□□□ -1.66
LTBR-212ENST00000543542 FRMD6-AS1P0C7T7 363 aa4.71□□□□□ -1.66
LTBR-212ENST00000543542 RPL35AP18077 110 aaKnown RBP4.71□□□□□ -1.66
LTBR-212ENST00000543542 CDC34P49427 236 aaPredicted RBP4.71□□□□□ -1.66
LTBR-212ENST00000543542 PSMB3P49720 205 aa4.71□□□□□ -1.66
LTBR-212ENST00000543542 RAB2AP61019 212 aa4.71□□□□□ -1.66
LTBR-212ENST00000543542 SERF2P84101 59 aa4.71□□□□□ -1.66
LTBR-212ENST00000543542 ODF3L2Q3SX64 289 aa4.71□□□□□ -1.66
LTBR-212ENST00000543542 KHDC3LQ587J8 217 aa4.71□□□□□ -1.66
LTBR-212ENST00000543542 MORN5Q5VZ52 161 aa4.71□□□□□ -1.66
LTBR-212ENST00000543542 SPATA31B1PQ5VZV4 182 aa4.71□□□□□ -1.66
LTBR-212ENST00000543542 LCN15Q6UWW0 184 aa4.71□□□□□ -1.66
LTBR-212ENST00000543542 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.71□□□□□ -1.66
LTBR-212ENST00000543542 IQCF2Q8IXL9 164 aa4.71□□□□□ -1.66
LTBR-212ENST00000543542 FAM24BQ8N5W8 94 aa4.71□□□□□ -1.66
LTBR-212ENST00000543542 DCANP1Q8TF63 244 aa4.71□□□□□ -1.66
LTBR-212ENST00000543542 ASCL2Q99929 193 aa4.71□□□□□ -1.66
LTBR-212ENST00000543542 PAXXQ9BUH6 204 aa4.71□□□□□ -1.66
LTBR-212ENST00000543542 ACTR3CQ9C0K3 210 aaPredicted RBP4.71□□□□□ -1.66
LTBR-212ENST00000543542 SH3BGRL3Q9H299 93 aa4.71□□□□□ -1.66
LTBR-212ENST00000543542 SEPSECSQ9HD40 501 aaKnown RBP4.71□□□□□ -1.66
LTBR-212ENST00000543542 RPRMQ9NS64 109 aa4.71□□□□□ -1.66
LTBR-212ENST00000543542 DNAH3Q8TD57 4116 aa4.7□□□□□ -1.66
LTBR-212ENST00000543542 A0A087X0K7 114 aa4.7□□□□□ -1.66
LTBR-212ENST00000543542 KNCNA6PVL3 124 aa4.7□□□□□ -1.66
LTBR-212ENST00000543542 ISLRO14498 428 aa4.7□□□□□ -1.66
LTBR-212ENST00000543542 HMGB3O15347 200 aaKnown RBP4.7□□□□□ -1.66
LTBR-212ENST00000543542 OR10J4P0C629 311 aa4.7□□□□□ -1.66
LTBR-212ENST00000543542 PYYP10082 97 aa4.7□□□□□ -1.66
LTBR-212ENST00000543542 SPP1P10451 314 aa4.7□□□□□ -1.66
LTBR-212ENST00000543542 TPT1P13693 172 aaKnown RBP4.7□□□□□ -1.66
LTBR-212ENST00000543542 UBE2L3P68036 154 aaKnown RBP4.7□□□□□ -1.66
LTBR-212ENST00000543542 CD300CQ08708 224 aa4.7□□□□□ -1.66
LTBR-212ENST00000543542 ZNF124Q15973 351 aa4.7□□□□□ -1.66
LTBR-212ENST00000543542 GUK1Q16774 197 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms