RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 COPS9Q8WXC6 57 aa5.64□□□□□ -1.51
SRGAP1-206ENST00000543397 HSPB9Q9BQS6 159 aa5.64□□□□□ -1.51
SRGAP1-206ENST00000543397 OTORQ9NRC9 128 aa5.64□□□□□ -1.51
SRGAP1-206ENST00000543397 ANAPC1Q9H1A4 1944 aa5.64□□□□□ -1.51
SRGAP1-206ENST00000543397 LINC00862A6NCI5 91 aa5.64□□□□□ -1.51
SRGAP1-206ENST00000543397 MPTX1A8MV57 137 aa5.64□□□□□ -1.51
SRGAP1-206ENST00000543397 J3QLI3 93 aa5.64□□□□□ -1.51
SRGAP1-206ENST00000543397 MDKP21741 143 aaPredicted RBP5.64□□□□□ -1.51
SRGAP1-206ENST00000543397 RUSC1-AS1Q66K80 236 aa5.64□□□□□ -1.51
SRGAP1-206ENST00000543397 FMC1Q96HJ9 113 aa5.64□□□□□ -1.51
SRGAP1-206ENST00000543397 REG4Q9BYZ8 158 aa5.64□□□□□ -1.51
SRGAP1-206ENST00000543397 IGHV1-69DA0A0B4J2H0 117 aa5.63□□□□□ -1.51
SRGAP1-206ENST00000543397 TRGV4A0A0C4DH28 118 aa5.63□□□□□ -1.51
SRGAP1-206ENST00000543397 NPIPB5A8MRT5 1133 aa5.63□□□□□ -1.51
SRGAP1-206ENST00000543397 H0YJW9 148 aa5.63□□□□□ -1.51
SRGAP1-206ENST00000543397 K7EM74 188 aa5.63□□□□□ -1.51
SRGAP1-206ENST00000543397 IGHV1-69P01742 117 aa5.63□□□□□ -1.51
SRGAP1-206ENST00000543397 CDPF1Q6NVV7 123 aa5.63□□□□□ -1.51
SRGAP1-206ENST00000543397 MDFIQ99750 246 aa5.63□□□□□ -1.51
SRGAP1-206ENST00000543397 TSC2P49815 1807 aa5.63□□□□□ -1.51
SRGAP1-206ENST00000543397 FABP5P3A8MUU1 101 aa5.63□□□□□ -1.51
SRGAP1-206ENST00000543397 PTPRDP23468 1912 aa5.63□□□□□ -1.51
SRGAP1-206ENST00000543397 TRBV7-1A0A0A6YYK4 115 aa5.63□□□□□ -1.51
SRGAP1-206ENST00000543397 TRAV21A0A0B4J279 112 aa5.63□□□□□ -1.51
SRGAP1-206ENST00000543397 GRIFINA4D1Z8 144 aa5.63□□□□□ -1.51
SRGAP1-206ENST00000543397 NMUP48645 174 aa5.63□□□□□ -1.51
SRGAP1-206ENST00000543397 ERVK11-1P61568 191 aa5.63□□□□□ -1.51
SRGAP1-206ENST00000543397 GAGE1Q13065 139 aa5.63□□□□□ -1.51
SRGAP1-206ENST00000543397 MEIG1Q5JSS6 88 aa5.63□□□□□ -1.51
SRGAP1-206ENST00000543397 KLF17Q5JT82 389 aaPredicted RBP5.63□□□□□ -1.51
SRGAP1-206ENST00000543397 C18orf12Q96KH6 178 aa5.63□□□□□ -1.51
SRGAP1-206ENST00000543397 SMIM9A6NGZ8 99 aa5.63□□□□□ -1.51
SRGAP1-206ENST00000543397 IFITM10A6NMD0 228 aa5.63□□□□□ -1.51
SRGAP1-206ENST00000543397 GATA4P43694 442 aa5.63□□□□□ -1.51
SRGAP1-206ENST00000543397 HBBP68871 147 aa5.63□□□□□ -1.51
SRGAP1-206ENST00000543397 CIRBPQ14011 172 aaKnown RBP5.63□□□□□ -1.51
SRGAP1-206ENST00000543397 Q5BKY6 102 aa5.63□□□□□ -1.51
SRGAP1-206ENST00000543397 Q6P435 159 aa5.63□□□□□ -1.51
SRGAP1-206ENST00000543397 UBE2DNLQ8IWF7 75 aa5.63□□□□□ -1.51
SRGAP1-206ENST00000543397 SIGLEC9Q9Y336 463 aa5.63□□□□□ -1.51
SRGAP1-206ENST00000543397 LRRK1Q38SD2 2015 aa5.63□□□□□ -1.51
SRGAP1-206ENST00000543397 CENPVL3A0A0U1RRI6 287 aa5.63□□□□□ -1.51
SRGAP1-206ENST00000543397 OVOL1O14753 267 aa5.63□□□□□ -1.51
SRGAP1-206ENST00000543397 LEPROTL1O95214 131 aa5.63□□□□□ -1.51
SRGAP1-206ENST00000543397 ZFAND6Q6FIF0 208 aa5.63□□□□□ -1.51
SRGAP1-206ENST00000543397 CCDC168Q8NDH2 2452 aa5.62□□□□□ -1.51
SRGAP1-206ENST00000543397 NLRC5Q86WI3 1866 aa5.62□□□□□ -1.51
SRGAP1-206ENST00000543397 IGHV2-70DA0A0C4DH43 119 aa5.62□□□□□ -1.51
SRGAP1-206ENST00000543397 OR11H12B2RN74 326 aa5.62□□□□□ -1.51
SRGAP1-206ENST00000543397 PRSS2P07478 247 aa5.62□□□□□ -1.51
SRGAP1-206ENST00000543397 ZNF688P0C7X2 276 aa5.62□□□□□ -1.51
SRGAP1-206ENST00000543397 MRPL18Q9H0U6 180 aaKnown RBP5.62□□□□□ -1.51
SRGAP1-206ENST00000543397 A0A1B0GUT8 65 aa5.62□□□□□ -1.51
SRGAP1-206ENST00000543397 FAM240AA0A1B0GVK7 77 aa5.62□□□□□ -1.51
SRGAP1-206ENST00000543397 Q6AWC8 147 aa5.62□□□□□ -1.51
SRGAP1-206ENST00000543397 FAM231DQ6ZW35 169 aa5.62□□□□□ -1.51
SRGAP1-206ENST00000543397 LRTM2Q8N967 370 aa5.62□□□□□ -1.51
SRGAP1-206ENST00000543397 FER1L6-AS1Q8NA97 138 aa5.62□□□□□ -1.51
SRGAP1-206ENST00000543397 Q8TCH9 128 aa5.62□□□□□ -1.51
SRGAP1-206ENST00000543397 YLPM1P49750 1951 aaKnown RBP5.62□□□□□ -1.51
SRGAP1-206ENST00000543397 TRGV11A0A075B6L2 103 aa5.62□□□□□ -1.51
SRGAP1-206ENST00000543397 MUC21A0A0G2JKD1 596 aa5.62□□□□□ -1.51
SRGAP1-206ENST00000543397 A0A0U1RQV1 116 aa5.62□□□□□ -1.51
SRGAP1-206ENST00000543397 MUC21A0A140T8X8 626 aa5.62□□□□□ -1.51
SRGAP1-206ENST00000543397 CDX1P47902 265 aaPredicted RBP5.62□□□□□ -1.51
SRGAP1-206ENST00000543397 OCIAD2Q56VL3 154 aa5.62□□□□□ -1.51
SRGAP1-206ENST00000543397 OR2K2Q8NGT1 345 aa5.62□□□□□ -1.51
SRGAP1-206ENST00000543397 OR10AG1Q8NH19 301 aa5.62□□□□□ -1.51
SRGAP1-206ENST00000543397 TRBV6-6A0A0A6YYG2 114 aa5.62□□□□□ -1.51
SRGAP1-206ENST00000543397 FAM223BA6NKX1 122 aa5.62□□□□□ -1.51
SRGAP1-206ENST00000543397 LYRM9A8MSI8 78 aa5.62□□□□□ -1.51
SRGAP1-206ENST00000543397 CD55P08174 381 aa5.62□□□□□ -1.51
SRGAP1-206ENST00000543397 SRIP30626 198 aa5.62□□□□□ -1.51
SRGAP1-206ENST00000543397 IGFL2Q6UWQ7 119 aa5.62□□□□□ -1.51
SRGAP1-206ENST00000543397 FAM223AQ8IWN6 122 aa5.62□□□□□ -1.51
SRGAP1-206ENST00000543397 GFI1Q99684 422 aa5.62□□□□□ -1.51
SRGAP1-206ENST00000543397 C1QTNF4Q9BXJ3 329 aa5.62□□□□□ -1.51
SRGAP1-206ENST00000543397 PRO3102Q9H379 93 aa5.62□□□□□ -1.51
SRGAP1-206ENST00000543397 CYSLTR1Q9Y271 337 aa5.62□□□□□ -1.51
SRGAP1-206ENST00000543397 SELENOKQ9Y6D0 94 aa5.62□□□□□ -1.51
SRGAP1-206ENST00000543397 TP53BP1Q12888 1972 aaPredicted RBP5.62□□□□□ -1.51
SRGAP1-206ENST00000543397 A0A1B0GUS0 222 aa5.61□□□□□ -1.51
SRGAP1-206ENST00000543397 SCO2A0A1W2PP80 73 aa5.61□□□□□ -1.51
SRGAP1-206ENST00000543397 GAGE12JA6NER3 117 aa5.61□□□□□ -1.51
SRGAP1-206ENST00000543397 GAGE7O76087 117 aa5.61□□□□□ -1.51
SRGAP1-206ENST00000543397 GAGE12FP0CL80 117 aa5.61□□□□□ -1.51
SRGAP1-206ENST00000543397 GAGE12GP0CL81 117 aa5.61□□□□□ -1.51
SRGAP1-206ENST00000543397 GAGE12IP0CL82 117 aa5.61□□□□□ -1.51
SRGAP1-206ENST00000543397 LGALS3P17931 250 aaKnown RBP5.61□□□□□ -1.51
SRGAP1-206ENST00000543397 GAGE4Q13068 117 aa5.61□□□□□ -1.51
SRGAP1-206ENST00000543397 IL17RELQ6ZVW7 336 aa5.61□□□□□ -1.51
SRGAP1-206ENST00000543397 GBF1Q92538 1859 aa5.61□□□□□ -1.51
SRGAP1-206ENST00000543397 SDHCQ99643 169 aaPredicted RBP5.61□□□□□ -1.51
SRGAP1-206ENST00000543397 C7orf71A4D174 169 aa5.61□□□□□ -1.51
SRGAP1-206ENST00000543397 A8MZ25 164 aa5.61□□□□□ -1.51
SRGAP1-206ENST00000543397 PYYP10082 97 aa5.61□□□□□ -1.51
SRGAP1-206ENST00000543397 KIAA1644Q3SXP7 199 aa5.61□□□□□ -1.51
SRGAP1-206ENST00000543397 FOXC2Q99958 501 aa5.61□□□□□ -1.51
SRGAP1-206ENST00000543397 NDUFAF3Q9BU61 184 aa5.61□□□□□ -1.51
SRGAP1-206ENST00000543397 WDR83OSQ9Y284 106 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms