RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 NIPSNAP3BQ9BS92 247 aa9.4□□□□□ -0.9
RTN3-212ENST00000543123 LOC102723971A0A1B0GUV8 181 aa9.39□□□□□ -0.91
RTN3-212ENST00000543123 F6UB75 175 aa9.39□□□□□ -0.91
RTN3-212ENST00000543123 SSSCA1O60232 199 aa9.39□□□□□ -0.91
RTN3-212ENST00000543123 RPL7P18124 248 aaKnown RBP9.39□□□□□ -0.91
RTN3-212ENST00000543123 ID3Q02535 119 aa9.39□□□□□ -0.91
RTN3-212ENST00000543123 OXA1LQ15070 435 aa9.39□□□□□ -0.91
RTN3-212ENST00000543123 CYP2G1PQ6ZSU1 146 aa9.39□□□□□ -0.91
RTN3-212ENST00000543123 IGF2BP2-AS1Q96M15 143 aa9.39□□□□□ -0.91
RTN3-212ENST00000543123 SRRQ9GZT4 340 aa9.39□□□□□ -0.91
RTN3-212ENST00000543123 PSENENQ9NZ42 101 aa9.39□□□□□ -0.91
RTN3-212ENST00000543123 DKK2Q9UBU2 259 aa9.39□□□□□ -0.91
RTN3-212ENST00000543123 HIGD1AQ9Y241 93 aa9.39□□□□□ -0.91
RTN3-212ENST00000543123 A8MTW9 85 aa9.38□□□□□ -0.91
RTN3-212ENST00000543123 FNDC10F2Z333 226 aa9.38□□□□□ -0.91
RTN3-212ENST00000543123 HYPMO75409 117 aa9.38□□□□□ -0.91
RTN3-212ENST00000543123 ADAP1O75689 374 aa9.38□□□□□ -0.91
RTN3-212ENST00000543123 INSP01308 110 aa9.38□□□□□ -0.91
RTN3-212ENST00000543123 OR4E1P0C645 316 aa9.38□□□□□ -0.91
RTN3-212ENST00000543123 GATA2P23769 480 aaPredicted RBP9.38□□□□□ -0.91
RTN3-212ENST00000543123 B2MP61769 119 aa9.38□□□□□ -0.91
RTN3-212ENST00000543123 POLR2GP62487 172 aaKnown RBP eCLIP9.38□□□□□ -0.91
RTN3-212ENST00000543123 CNPY1Q3B7I2 92 aa9.38□□□□□ -0.91
RTN3-212ENST00000543123 C4orf46Q504U0 113 aa9.38□□□□□ -0.91
RTN3-212ENST00000543123 FAM222AQ5U5X8 452 aa9.38□□□□□ -0.91
RTN3-212ENST00000543123 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.38□□□□□ -0.91
RTN3-212ENST00000543123 SMIM8Q96KF7 97 aa9.38□□□□□ -0.91
RTN3-212ENST00000543123 SHANK2-AS3Q9BTD1 123 aa9.38□□□□□ -0.91
RTN3-212ENST00000543123 SCRT1Q9BWW7 348 aa9.38□□□□□ -0.91
RTN3-212ENST00000543123 MGAT4CQ9UBM8 478 aa9.38□□□□□ -0.91
RTN3-212ENST00000543123 H3BRN7 92 aa9.37□□□□□ -0.91
RTN3-212ENST00000543123 LINC00869P0C866 280 aa9.37□□□□□ -0.91
RTN3-212ENST00000543123 DLK1P80370 383 aa9.37□□□□□ -0.91
RTN3-212ENST00000543123 FGL1Q08830 312 aa9.37□□□□□ -0.91
RTN3-212ENST00000543123 UBE2DNLQ8IWF7 75 aa9.37□□□□□ -0.91
RTN3-212ENST00000543123 C1orf158Q8N1D5 194 aa9.37□□□□□ -0.91
RTN3-212ENST00000543123 ZNF738Q8NE65 137 aa9.37□□□□□ -0.91
RTN3-212ENST00000543123 OR10P1Q8NGE3 313 aa9.37□□□□□ -0.91
RTN3-212ENST00000543123 C20orf173Q96LM9 149 aa9.37□□□□□ -0.91
RTN3-212ENST00000543123 SLC25A39Q9BZJ4 359 aaPredicted RBP9.37□□□□□ -0.91
RTN3-212ENST00000543123 RBM38Q9H0Z9 239 aaKnown RBP9.37□□□□□ -0.91
RTN3-212ENST00000543123 YTHDF2Q9Y5A9 579 aaKnown RBP9.37□□□□□ -0.91
RTN3-212ENST00000543123 OR5G3P0C626 314 aa9.36□□□□□ -0.91
RTN3-212ENST00000543123 CNN1P51911 297 aaKnown RBP9.36□□□□□ -0.91
RTN3-212ENST00000543123 TAS2R30P59541 319 aa9.36□□□□□ -0.91
RTN3-212ENST00000543123 PLP1P60201 277 aa9.36□□□□□ -0.91
RTN3-212ENST00000543123 DAD1P61803 113 aa9.36□□□□□ -0.91
RTN3-212ENST00000543123 IAH1Q2TAA2 248 aaPredicted RBP9.36□□□□□ -0.91
RTN3-212ENST00000543123 PXDC1Q5TGL8 231 aa9.36□□□□□ -0.91
RTN3-212ENST00000543123 LRRC20Q8TCA0 184 aa9.36□□□□□ -0.91
RTN3-212ENST00000543123 NPVFQ9HCQ7 196 aa9.36□□□□□ -0.91
RTN3-212ENST00000543123 K7EPK0 472 aa9.35□□□□□ -0.91
RTN3-212ENST00000543123 TSC22D2O75157 780 aa9.35□□□□□ -0.91
RTN3-212ENST00000543123 SCGB1D2O95969 90 aa9.35□□□□□ -0.91
RTN3-212ENST00000543123 METTL15P1P0C7V9 234 aa9.35□□□□□ -0.91
RTN3-212ENST00000543123 HTN3P15516 51 aa9.35□□□□□ -0.91
RTN3-212ENST00000543123 BAK1Q16611 211 aa9.35□□□□□ -0.91
RTN3-212ENST00000543123 TEPPQ6URK8 271 aa9.35□□□□□ -0.91
RTN3-212ENST00000543123 AMTNQ6UX39 209 aa9.35□□□□□ -0.91
RTN3-212ENST00000543123 TMEM14EPQ6UXP3 125 aa9.35□□□□□ -0.91
RTN3-212ENST00000543123 TMEM182Q6ZP80 229 aaPredicted RBP9.35□□□□□ -0.91
RTN3-212ENST00000543123 ZNF546Q86UE3 836 aa9.35□□□□□ -0.91
RTN3-212ENST00000543123 OR11H7Q8NGC8 314 aa9.35□□□□□ -0.91
RTN3-212ENST00000543123 GGACTQ9BVM4 153 aa9.35□□□□□ -0.91
RTN3-212ENST00000543123 PPP1R14DQ9NXH3 145 aa9.35□□□□□ -0.91
RTN3-212ENST00000543123 HERC2O95714 4834 aa9.35□□□□□ -0.91
RTN3-212ENST00000543123 A0A087X0K7 114 aa9.34□□□□□ -0.91
RTN3-212ENST00000543123 LINC00854A0A1B0GVQ3 168 aa9.34□□□□□ -0.91
RTN3-212ENST00000543123 LYRM9A8MSI8 78 aa9.34□□□□□ -0.91
RTN3-212ENST00000543123 BOLA2-SMG1P6H3BVE0 249 aa9.34□□□□□ -0.91
RTN3-212ENST00000543123 CXCL2P19875 107 aa9.34□□□□□ -0.91
RTN3-212ENST00000543123 ANXA7P20073 488 aaKnown RBP9.34□□□□□ -0.91
RTN3-212ENST00000543123 TSPOP30536 169 aa9.34□□□□□ -0.91
RTN3-212ENST00000543123 RRAS2P62070 204 aaPredicted RBP9.34□□□□□ -0.91
RTN3-212ENST00000543123 ZNF846Q147U1 533 aa9.34□□□□□ -0.91
RTN3-212ENST00000543123 SPINK13Q1W4C9 94 aa9.34□□□□□ -0.91
RTN3-212ENST00000543123 RNF212Q495C1 297 aa9.34□□□□□ -0.91
RTN3-212ENST00000543123 TMEM256Q8N2U0 113 aa9.34□□□□□ -0.91
RTN3-212ENST00000543123 RNF182Q8N6D2 247 aa9.34□□□□□ -0.91
RTN3-212ENST00000543123 ARL6Q9H0F7 186 aa9.34□□□□□ -0.91
RTN3-212ENST00000543123 GSKIPQ9P0R6 139 aa9.34□□□□□ -0.91
RTN3-212ENST00000543123 FLVCR2Q9UPI3 526 aa9.34□□□□□ -0.91
RTN3-212ENST00000543123 TRAV8-2A0A0B4J237 113 aa9.33□□□□□ -0.92
RTN3-212ENST00000543123 PMS2P5A8MQ11 134 aa9.33□□□□□ -0.92
RTN3-212ENST00000543123 M0R2Z0 102 aa9.33□□□□□ -0.92
RTN3-212ENST00000543123 GOSR2O14653 212 aa9.33□□□□□ -0.92
RTN3-212ENST00000543123 RHOBP62745 196 aa9.33□□□□□ -0.92
RTN3-212ENST00000543123 LGALS9BQ3B8N2 356 aa9.33□□□□□ -0.92
RTN3-212ENST00000543123 SOHLH1Q5JUK2 328 aa9.33□□□□□ -0.92
RTN3-212ENST00000543123 GSG1LQ6UXU4 331 aa9.33□□□□□ -0.92
RTN3-212ENST00000543123 C15orf53Q8NAA6 179 aa9.33□□□□□ -0.92
RTN3-212ENST00000543123 ZBTB8BQ8NAP8 495 aaPredicted RBP9.33□□□□□ -0.92
RTN3-212ENST00000543123 MITD1Q8WV92 249 aa9.33□□□□□ -0.92
RTN3-212ENST00000543123 C17orf77Q96MU5 243 aa9.33□□□□□ -0.92
RTN3-212ENST00000543123 UHRF2Q96PU4 802 aa9.33□□□□□ -0.92
RTN3-212ENST00000543123 NDUFA13Q9P0J0 144 aa9.33□□□□□ -0.92
RTN3-212ENST00000543123 DNAH2Q9P225 4427 aa9.33□□□□□ -0.92
RTN3-212ENST00000543123 FAT2Q9NYQ8 4349 aa9.32□□□□□ -0.92
RTN3-212ENST00000543123 PKHD1P08F94 4074 aa9.32□□□□□ -0.92
RTN3-212ENST00000543123 L7N2F9 121 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms