RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 V9GYV3 84 aa6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 TRGV10A0A0A0MS01 117 aa6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 A6NDN8 102 aa6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 SH2D7A6NKC9 451 aaPredicted RBP6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 RRHO14718 337 aa6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 EVI2AP22794 236 aa6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 EMP1P54849 157 aa6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 PQLC2Q6ZP29 291 aa6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 FAM90A1Q86YD7 464 aa6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 ZNF808Q8N4W9 903 aaPredicted RBP6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 VSTM2AQ8TAG5 236 aa6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 ADTRPQ96IZ2 230 aa6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 ZNF331Q9NQX6 463 aaPredicted RBP6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 ACACAQ13085 2346 aa6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 PIGBOS1A0A0B4J2F0 54 aa6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 TMEM30CPA0ZSE6 113 aa6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 C12orf77C9JDV5 145 aa6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 H3BUT2 72 aa6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 J3KT08 172 aa6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 IGHV1-46P01743 117 aa6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 C8orf88P0DMB2 117 aa6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 GNG5P63218 68 aa6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 CX3CL1P78423 397 aa6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 C18orf32Q8TCD1 76 aa6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 ITLN1Q8WWA0 313 aa6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 SSMEM1Q8WWF3 244 aa6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 LIN7CQ9NUP9 197 aaKnown RBP6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 SPRY3O43610 288 aa6.44□□□□□ -1.38
PDLIM5-221ENST00000542407 AMY1AP04745 511 aa6.44□□□□□ -1.38
PDLIM5-221ENST00000542407 VDAC2P45880 294 aaPredicted RBP6.44□□□□□ -1.38
PDLIM5-221ENST00000542407 BSPH1Q075Z2 132 aa6.44□□□□□ -1.38
PDLIM5-221ENST00000542407 DIAPH2-AS1Q14236 149 aa6.44□□□□□ -1.38
PDLIM5-221ENST00000542407 CENPWQ5EE01 88 aa6.44□□□□□ -1.38
PDLIM5-221ENST00000542407 MIC13Q5XKP0 118 aa6.44□□□□□ -1.38
PDLIM5-221ENST00000542407 Q6AWC8 147 aa6.44□□□□□ -1.38
PDLIM5-221ENST00000542407 RND1Q92730 232 aa6.44□□□□□ -1.38
PDLIM5-221ENST00000542407 SLC25A33Q9BSK2 321 aa6.44□□□□□ -1.38
PDLIM5-221ENST00000542407 SSBP3Q9BWW4 388 aaPredicted RBP6.44□□□□□ -1.38
PDLIM5-221ENST00000542407 TMEM133Q9H2Q1 129 aa6.44□□□□□ -1.38
PDLIM5-221ENST00000542407 ZZEF1O43149 2961 aa6.44□□□□□ -1.38
PDLIM5-221ENST00000542407 PIEZO2Q9H5I5 2752 aa6.44□□□□□ -1.38
PDLIM5-221ENST00000542407 C9JAW5 83 aa6.44□□□□□ -1.38
PDLIM5-221ENST00000542407 FNDC10F2Z333 226 aa6.44□□□□□ -1.38
PDLIM5-221ENST00000542407 H3BRM9 83 aa6.44□□□□□ -1.38
PDLIM5-221ENST00000542407 HLA-DQA1P01909 254 aa6.44□□□□□ -1.38
PDLIM5-221ENST00000542407 KLRB1Q12918 225 aa6.44□□□□□ -1.38
PDLIM5-221ENST00000542407 KLRD1Q13241 179 aa6.44□□□□□ -1.38
PDLIM5-221ENST00000542407 EIF4EBP1Q13541 118 aaPredicted RBP6.44□□□□□ -1.38
PDLIM5-221ENST00000542407 FAM53AQ6NSI3 398 aaPredicted RBP6.44□□□□□ -1.38
PDLIM5-221ENST00000542407 LCNL1Q6ZST4 164 aa6.44□□□□□ -1.38
PDLIM5-221ENST00000542407 OR13A1Q8NGR1 328 aa6.44□□□□□ -1.38
PDLIM5-221ENST00000542407 PMCHL2Q9BQD1 86 aa6.44□□□□□ -1.38
PDLIM5-221ENST00000542407 TMEM70Q9BUB7 260 aa6.44□□□□□ -1.38
PDLIM5-221ENST00000542407 FAM234AQ9H0X4 552 aa6.44□□□□□ -1.38
PDLIM5-221ENST00000542407 HIGD1AQ9Y241 93 aa6.44□□□□□ -1.38
PDLIM5-221ENST00000542407 CXorf1O96002 111 aa6.43□□□□□ -1.38
PDLIM5-221ENST00000542407 REG1AP05451 166 aa6.43□□□□□ -1.38
PDLIM5-221ENST00000542407 CRYBB3P26998 211 aa6.43□□□□□ -1.38
PDLIM5-221ENST00000542407 CAMPP49913 170 aa6.43□□□□□ -1.38
PDLIM5-221ENST00000542407 XGP55808 180 aa6.43□□□□□ -1.38
PDLIM5-221ENST00000542407 NDUFV3P56181 108 aaKnown RBP6.43□□□□□ -1.38
PDLIM5-221ENST00000542407 TMEM97Q5BJF2 176 aa6.43□□□□□ -1.38
PDLIM5-221ENST00000542407 OR8B3Q8NGG8 313 aa6.43□□□□□ -1.38
PDLIM5-221ENST00000542407 OSR1Q8TAX0 266 aaPredicted RBP6.43□□□□□ -1.38
PDLIM5-221ENST00000542407 SOX21Q9Y651 276 aaPredicted RBP6.43□□□□□ -1.38
PDLIM5-221ENST00000542407 IGHV3OR15-7A0A075B7D8 119 aa6.43□□□□□ -1.38
PDLIM5-221ENST00000542407 ISLRO14498 428 aa6.43□□□□□ -1.38
PDLIM5-221ENST00000542407 SEC11AP67812 179 aa6.43□□□□□ -1.38
PDLIM5-221ENST00000542407 ZNF415Q09FC8 603 aa6.43□□□□□ -1.38
PDLIM5-221ENST00000542407 RASL11AQ6T310 242 aa6.43□□□□□ -1.38
PDLIM5-221ENST00000542407 SSX8Q7RTT4 187 aa6.43□□□□□ -1.38
PDLIM5-221ENST00000542407 TPRX1Q8N7U7 411 aa6.43□□□□□ -1.38
PDLIM5-221ENST00000542407 LINC00477Q96M19 166 aa6.43□□□□□ -1.38
PDLIM5-221ENST00000542407 TECRQ9NZ01 308 aaKnown RBP6.43□□□□□ -1.38
PDLIM5-221ENST00000542407 IGF2RP11717 2491 aa6.42□□□□□ -1.38
PDLIM5-221ENST00000542407 LRRC30A6NM36 301 aa6.42□□□□□ -1.38
PDLIM5-221ENST00000542407 PMS2P5A8MQ11 134 aa6.42□□□□□ -1.38
PDLIM5-221ENST00000542407 SHISA9B4DS77 424 aa6.42□□□□□ -1.38
PDLIM5-221ENST00000542407 GHRHP01286 108 aa6.42□□□□□ -1.38
PDLIM5-221ENST00000542407 MFAP2P55001 183 aa6.42□□□□□ -1.38
PDLIM5-221ENST00000542407 CR1LQ2VPA4 569 aa6.42□□□□□ -1.38
PDLIM5-221ENST00000542407 C6orf226Q5I0X4 101 aa6.42□□□□□ -1.38
PDLIM5-221ENST00000542407 LINC00173Q6ZV60 143 aa6.42□□□□□ -1.38
PDLIM5-221ENST00000542407 RAB37Q96AX2 223 aa6.42□□□□□ -1.38
PDLIM5-221ENST00000542407 HSD17B10Q99714 261 aaKnown RBP6.42□□□□□ -1.38
PDLIM5-221ENST00000542407 ZGRF1Q86YA3 2104 aa6.42□□□□□ -1.38
PDLIM5-221ENST00000542407 TRGV8A0A0C4DH27 118 aa6.42□□□□□ -1.38
PDLIM5-221ENST00000542407 C2orf70A6NJV1 201 aa6.42□□□□□ -1.38
PDLIM5-221ENST00000542407 CSN3P07498 182 aa6.42□□□□□ -1.38
PDLIM5-221ENST00000542407 GCHFRP30047 84 aa6.42□□□□□ -1.38
PDLIM5-221ENST00000542407 TNFAIP6P98066 277 aaPredicted RBP6.42□□□□□ -1.38
PDLIM5-221ENST00000542407 TNP2Q05952 138 aa6.42□□□□□ -1.38
PDLIM5-221ENST00000542407 FBXL19-AS1Q494R0 122 aa6.42□□□□□ -1.38
PDLIM5-221ENST00000542407 FAM201AQ5SY85 155 aa6.42□□□□□ -1.38
PDLIM5-221ENST00000542407 DRAM1Q8N682 238 aa6.42□□□□□ -1.38
PDLIM5-221ENST00000542407 SYT8Q8NBV8 401 aa6.42□□□□□ -1.38
PDLIM5-221ENST00000542407 C20orf78Q9BR46 151 aa6.42□□□□□ -1.38
PDLIM5-221ENST00000542407 DCTN5Q9BTE1 182 aa6.42□□□□□ -1.38
PDLIM5-221ENST00000542407 PRORYQ9H606 182 aa6.42□□□□□ -1.38
PDLIM5-221ENST00000542407 TNFRSF19Q9NS68 423 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms