RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 MRPS16Q9Y3D3 137 aaKnown RBP12.26□□□□□ -0.45
CNOT9-208ENST00000542068 HIVEP3Q5T1R4 2406 aa12.26□□□□□ -0.45
CNOT9-208ENST00000542068 IGLC7A0M8Q6 106 aa12.26□□□□□ -0.45
CNOT9-208ENST00000542068 FCN3O75636 299 aa12.26□□□□□ -0.45
CNOT9-208ENST00000542068 ZNF833PQ6ZTB9 187 aa12.26□□□□□ -0.45
CNOT9-208ENST00000542068 TMUB1Q9BVT8 246 aa12.26□□□□□ -0.45
CNOT9-208ENST00000542068 INSIG2Q9Y5U4 225 aa12.26□□□□□ -0.45
CNOT9-208ENST00000542068 E7EQL1 145 aa12.26□□□□□ -0.45
CNOT9-208ENST00000542068 SYS1-DBNDD2H3BUS1 97 aa12.26□□□□□ -0.45
CNOT9-208ENST00000542068 S100A7P31151 101 aa12.26□□□□□ -0.45
CNOT9-208ENST00000542068 NGBQ9NPG2 151 aa12.26□□□□□ -0.45
CNOT9-208ENST00000542068 IGHV1-69-2A0A0G2JMI3 117 aa12.25□□□□□ -0.45
CNOT9-208ENST00000542068 SERTM2A0A1B0GWG4 89 aa12.25□□□□□ -0.45
CNOT9-208ENST00000542068 UQCRFS1P47985 274 aa12.25□□□□□ -0.45
CNOT9-208ENST00000542068 VMA21Q3ZAQ7 101 aa12.25□□□□□ -0.45
CNOT9-208ENST00000542068 TEX45Q8NA69 505 aa12.25□□□□□ -0.45
CNOT9-208ENST00000542068 SRSF12Q8WXF0 261 aaKnown RBP12.25□□□□□ -0.45
CNOT9-208ENST00000542068 NAA38Q9BRA0 125 aaKnown RBP12.25□□□□□ -0.45
CNOT9-208ENST00000542068 DCHS2Q6V1P9 2916 aa12.25□□□□□ -0.45
CNOT9-208ENST00000542068 LOC105371242A0A075B767 164 aa12.25□□□□□ -0.45
CNOT9-208ENST00000542068 FAM231DQ6ZW35 169 aa12.25□□□□□ -0.45
CNOT9-208ENST00000542068 OR5AN1Q8NGI8 311 aa12.25□□□□□ -0.45
CNOT9-208ENST00000542068 FAM222BQ8WU58 562 aa12.25□□□□□ -0.45
CNOT9-208ENST00000542068 FBXL15Q9H469 300 aa12.25□□□□□ -0.45
CNOT9-208ENST00000542068 FOXE3Q13461 319 aa12.24□□□□□ -0.45
CNOT9-208ENST00000542068 TMEM116Q8NCL8 245 aa12.24□□□□□ -0.45
CNOT9-208ENST00000542068 WIPF2Q8TF74 440 aaPredicted RBP12.24□□□□□ -0.45
CNOT9-208ENST00000542068 C22orf15Q8WYQ4 148 aa12.24□□□□□ -0.45
CNOT9-208ENST00000542068 C17orf77Q96MU5 243 aa12.24□□□□□ -0.45
CNOT9-208ENST00000542068 CD3EP07766 207 aa12.24□□□□□ -0.45
CNOT9-208ENST00000542068 TMEM167AQ8TBQ9 72 aa12.24□□□□□ -0.45
CNOT9-208ENST00000542068 CHRDL1Q9BU40 450 aa12.24□□□□□ -0.45
CNOT9-208ENST00000542068 TCRAP04437 139 aa12.24□□□□□ -0.45
CNOT9-208ENST00000542068 ARF6P62330 175 aa12.24□□□□□ -0.45
CNOT9-208ENST00000542068 MUC15Q8N387 334 aa12.24□□□□□ -0.45
CNOT9-208ENST00000542068 RPEQ96AT9 228 aa12.24□□□□□ -0.45
CNOT9-208ENST00000542068 PSG1P11464 419 aa12.23□□□□□ -0.45
CNOT9-208ENST00000542068 RBPJQ06330 500 aa12.23□□□□□ -0.45
CNOT9-208ENST00000542068 KLF5Q13887 457 aaPredicted RBP12.23□□□□□ -0.45
CNOT9-208ENST00000542068 AMMECR1LQ6DCA0 310 aa12.23□□□□□ -0.45
CNOT9-208ENST00000542068 SLC25A34Q6PIV7 304 aa12.23□□□□□ -0.45
CNOT9-208ENST00000542068 FAM120AOSQ5T036 256 aa12.23□□□□□ -0.45
CNOT9-208ENST00000542068 ASCL5Q7RTU5 278 aa12.23□□□□□ -0.45
CNOT9-208ENST00000542068 Q8NA96 180 aa12.23□□□□□ -0.45
CNOT9-208ENST00000542068 VSTM2AQ8TAG5 236 aa12.23□□□□□ -0.45
CNOT9-208ENST00000542068 C7orf69Q9H7B7 122 aa12.23□□□□□ -0.45
CNOT9-208ENST00000542068 A0A1B0GXF2 115 aa12.22□□□□□ -0.45
CNOT9-208ENST00000542068 RPL27AP46776 148 aaKnown RBP12.22□□□□□ -0.45
CNOT9-208ENST00000542068 RBX1P62877 108 aa12.22□□□□□ -0.45
CNOT9-208ENST00000542068 LDLRAD2Q5SZI1 272 aa12.22□□□□□ -0.45
CNOT9-208ENST00000542068 OR8A1Q8NGG7 326 aa12.22□□□□□ -0.45
CNOT9-208ENST00000542068 VPS25Q9BRG1 176 aa12.22□□□□□ -0.45
CNOT9-208ENST00000542068 MAP1LC3CQ9BXW4 147 aa12.22□□□□□ -0.45
CNOT9-208ENST00000542068 CSPG4Q6UVK1 2322 aa12.22□□□□□ -0.45
CNOT9-208ENST00000542068 FAM208BQ5VWN6 2430 aa12.22□□□□□ -0.45
CNOT9-208ENST00000542068 OR2J3O76001 311 aa12.22□□□□□ -0.45
CNOT9-208ENST00000542068 RBPMS2Q6ZRY4 209 aaKnown RBP12.22□□□□□ -0.45
CNOT9-208ENST00000542068 WFDC3Q8IUB2 231 aa12.22□□□□□ -0.45
CNOT9-208ENST00000542068 TMEM191AQ9H0A3 160 aa12.22□□□□□ -0.45
CNOT9-208ENST00000542068 FSTL3O95633 263 aa12.22□□□□□ -0.45
CNOT9-208ENST00000542068 IGLV2-23P01705 113 aa12.22□□□□□ -0.45
CNOT9-208ENST00000542068 ARMS2P0C7Q2 107 aa12.22□□□□□ -0.45
CNOT9-208ENST00000542068 LOXP28300 417 aaPredicted RBP12.22□□□□□ -0.45
CNOT9-208ENST00000542068 C5orf17Q8NAS9 161 aa12.22□□□□□ -0.45
CNOT9-208ENST00000542068 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.21□□□□□ -0.45
CNOT9-208ENST00000542068 CCL21O00585 134 aa12.21□□□□□ -0.45
CNOT9-208ENST00000542068 APOHP02749 345 aaPredicted RBP12.21□□□□□ -0.45
CNOT9-208ENST00000542068 RASL11AQ6T310 242 aa12.21□□□□□ -0.45
CNOT9-208ENST00000542068 PRSS3P2Q8NHM4 247 aa12.21□□□□□ -0.45
CNOT9-208ENST00000542068 IGHV3-35A0A0C4DH35 117 aa12.21□□□□□ -0.46
CNOT9-208ENST00000542068 IGHV1-8P0DP01 117 aa12.21□□□□□ -0.46
CNOT9-208ENST00000542068 TEX36Q5VZQ5 186 aa12.21□□□□□ -0.46
CNOT9-208ENST00000542068 NUP37Q8NFH4 326 aa12.21□□□□□ -0.46
CNOT9-208ENST00000542068 HIGD1AQ9Y241 93 aa12.21□□□□□ -0.46
CNOT9-208ENST00000542068 IGHV3OR16-8A0A075B7F1 116 aa12.2□□□□□ -0.46
CNOT9-208ENST00000542068 M0R3E3 92 aa12.2□□□□□ -0.46
CNOT9-208ENST00000542068 FAM106CPP0CH98 169 aa12.2□□□□□ -0.46
CNOT9-208ENST00000542068 FAM106AQ4KMX7 169 aa12.2□□□□□ -0.46
CNOT9-208ENST00000542068 KLF17Q5JT82 389 aaPredicted RBP12.2□□□□□ -0.46
CNOT9-208ENST00000542068 CENPEQ02224 2701 aa12.2□□□□□ -0.46
CNOT9-208ENST00000542068 ACACBO00763 2458 aa12.2□□□□□ -0.46
CNOT9-208ENST00000542068 TMEM186Q96B77 213 aa12.2□□□□□ -0.46
CNOT9-208ENST00000542068 PPIAL4CA0A0B4J2A2 164 aa12.19□□□□□ -0.46
CNOT9-208ENST00000542068 NCR2O95944 276 aa12.19□□□□□ -0.46
CNOT9-208ENST00000542068 PPIAL4GP0DN37 164 aa12.19□□□□□ -0.46
CNOT9-208ENST00000542068 MYCNOSP40205 109 aa12.19□□□□□ -0.46
CNOT9-208ENST00000542068 ATP5IP56385 69 aaPredicted RBP12.19□□□□□ -0.46
CNOT9-208ENST00000542068 ATP5L2Q7Z4Y8 100 aa12.19□□□□□ -0.46
CNOT9-208ENST00000542068 TOMM40O96008 361 aa12.19□□□□□ -0.46
CNOT9-208ENST00000542068 MEF2CQ06413 473 aaPredicted RBP12.19□□□□□ -0.46
CNOT9-208ENST00000542068 BVES-AS1Q5T3Y7 98 aa12.19□□□□□ -0.46
CNOT9-208ENST00000542068 TAX1BP3O14907 124 aa12.19□□□□□ -0.46
CNOT9-208ENST00000542068 THAP8Q8NA92 274 aa12.19□□□□□ -0.46
CNOT9-208ENST00000542068 STXBP6Q8NFX7 210 aa12.19□□□□□ -0.46
CNOT9-208ENST00000542068 MLST8Q9BVC4 326 aa12.19□□□□□ -0.46
CNOT9-208ENST00000542068 PIEZO1Q92508 2521 aa12.18□□□□□ -0.46
CNOT9-208ENST00000542068 OR5AL1P0C617 328 aa12.18□□□□□ -0.46
CNOT9-208ENST00000542068 GP9P14770 177 aa12.18□□□□□ -0.46
CNOT9-208ENST00000542068 FA2HQ7L5A8 372 aa12.18□□□□□ -0.46
CNOT9-208ENST00000542068 FMC1Q96HJ9 113 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms