RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 HSD17B11Q8NBQ5 300 aa4.09□□□□□ -1.75
CPSF7-220ENST00000541963 OR51H1Q8NH63 302 aa4.09□□□□□ -1.75
CPSF7-220ENST00000541963 CASTOR1Q8WTX7 329 aa4.09□□□□□ -1.75
CPSF7-220ENST00000541963 DCUN1D4Q92564 292 aa4.09□□□□□ -1.75
CPSF7-220ENST00000541963 BTF3L4Q96K17 158 aa4.09□□□□□ -1.75
CPSF7-220ENST00000541963 SMIM8Q96KF7 97 aa4.09□□□□□ -1.75
CPSF7-220ENST00000541963 OR4C12Q96R67 309 aa4.09□□□□□ -1.75
CPSF7-220ENST00000541963 GGACTQ9BVM4 153 aa4.09□□□□□ -1.75
CPSF7-220ENST00000541963 NMES1Q9C002 83 aa4.09□□□□□ -1.75
CPSF7-220ENST00000541963 TREM1Q9NP99 234 aa4.09□□□□□ -1.75
CPSF7-220ENST00000541963 SLC2A9Q9NRM0 540 aa4.09□□□□□ -1.75
CPSF7-220ENST00000541963 FAM212BQ9NTI7 297 aaPredicted RBP4.09□□□□□ -1.75
CPSF7-220ENST00000541963 FKBP11Q9NYL4 201 aa4.09□□□□□ -1.75
CPSF7-220ENST00000541963 THYN1Q9P016 225 aa4.09□□□□□ -1.75
CPSF7-220ENST00000541963 PEF1Q9UBV8 284 aaKnown RBP4.09□□□□□ -1.75
CPSF7-220ENST00000541963 ZNF257Q9Y2Q1 563 aa4.09□□□□□ -1.75
CPSF7-220ENST00000541963 A0A087WZ39 114 aa4.08□□□□□ -1.76
CPSF7-220ENST00000541963 PIGBOS1A0A0B4J2F0 54 aa4.08□□□□□ -1.76
CPSF7-220ENST00000541963 C15orf61A6NNL5 157 aa4.08□□□□□ -1.76
CPSF7-220ENST00000541963 KRTAP29-1A8MX34 341 aaPredicted RBP4.08□□□□□ -1.76
CPSF7-220ENST00000541963 B4DEV8 164 aa4.08□□□□□ -1.76
CPSF7-220ENST00000541963 PPP1R2P9O14990 202 aa4.08□□□□□ -1.76
CPSF7-220ENST00000541963 SAP30O75446 220 aa4.08□□□□□ -1.76
CPSF7-220ENST00000541963 SIX6O95475 246 aa4.08□□□□□ -1.76
CPSF7-220ENST00000541963 RAB3DO95716 219 aa4.08□□□□□ -1.76
CPSF7-220ENST00000541963 PRB2P02812 416 aaPredicted RBP4.08□□□□□ -1.76
CPSF7-220ENST00000541963 CD74P04233 296 aa4.08□□□□□ -1.76
CPSF7-220ENST00000541963 CD5P06127 495 aa4.08□□□□□ -1.76
CPSF7-220ENST00000541963 SERPINE2P07093 398 aa4.08□□□□□ -1.76
CPSF7-220ENST00000541963 CRYGCP07315 174 aa4.08□□□□□ -1.76
CPSF7-220ENST00000541963 METTL15P1P0C7V9 234 aa4.08□□□□□ -1.76
CPSF7-220ENST00000541963 ZNF735P0CB33 412 aa4.08□□□□□ -1.76
CPSF7-220ENST00000541963 APELAP0DMC3 54 aa4.08□□□□□ -1.76
CPSF7-220ENST00000541963 PGAM2P15259 253 aa4.08□□□□□ -1.76
CPSF7-220ENST00000541963 PSMB6P28072 239 aa4.08□□□□□ -1.76
CPSF7-220ENST00000541963 DDTP30046 118 aa4.08□□□□□ -1.76
CPSF7-220ENST00000541963 GPX4P36969 197 aaPredicted RBP4.08□□□□□ -1.76
CPSF7-220ENST00000541963 LPAR6P43657 344 aa4.08□□□□□ -1.76
CPSF7-220ENST00000541963 RHOGP84095 191 aa4.08□□□□□ -1.76
CPSF7-220ENST00000541963 SRSF9Q13242 221 aaKnown RBP eCLIP4.08□□□□□ -1.76
CPSF7-220ENST00000541963 POU2AF1Q16633 256 aa4.08□□□□□ -1.76
CPSF7-220ENST00000541963 MRGPRG-AS1Q2M3A8 158 aa4.08□□□□□ -1.76
CPSF7-220ENST00000541963 RPEL1Q2QD12 228 aa4.08□□□□□ -1.76
CPSF7-220ENST00000541963 LRRC37A5PQ49AS3 106 aa4.08□□□□□ -1.76
CPSF7-220ENST00000541963 FAM106AQ4KMX7 169 aa4.08□□□□□ -1.76
CPSF7-220ENST00000541963 SAPCD1Q5SSQ6 148 aa4.08□□□□□ -1.76
CPSF7-220ENST00000541963 LCE1AQ5T7P2 110 aa4.08□□□□□ -1.76
CPSF7-220ENST00000541963 ZNF343Q6P1L6 599 aa4.08□□□□□ -1.76
CPSF7-220ENST00000541963 SIGLEC15Q6ZMC9 328 aa4.08□□□□□ -1.76
CPSF7-220ENST00000541963 CCDC71LQ8N9Z2 235 aa4.08□□□□□ -1.76
CPSF7-220ENST00000541963 NECAP1Q8NC96 275 aa4.08□□□□□ -1.76
CPSF7-220ENST00000541963 ADAD2Q8NCV1 583 aaKnown RBP4.08□□□□□ -1.76
CPSF7-220ENST00000541963 OR1L6Q8NGR2 347 aa4.08□□□□□ -1.76
CPSF7-220ENST00000541963 OR1L8Q8NGR8 309 aa4.08□□□□□ -1.76
CPSF7-220ENST00000541963 DLX4Q92988 240 aaPredicted RBP4.08□□□□□ -1.76
CPSF7-220ENST00000541963 HIST1H2BAQ96A08 127 aa4.08□□□□□ -1.76
CPSF7-220ENST00000541963 TMEM56Q96MV1 263 aa4.08□□□□□ -1.76
CPSF7-220ENST00000541963 WNK1Q9H4A3 2382 aa4.08□□□□□ -1.76
CPSF7-220ENST00000541963 KLK11Q9UBX7 282 aa4.08□□□□□ -1.76
CPSF7-220ENST00000541963 PRNDQ9UKY0 176 aa4.08□□□□□ -1.76
CPSF7-220ENST00000541963 STRAPQ9Y3F4 350 aaKnown RBP4.08□□□□□ -1.76
CPSF7-220ENST00000541963 TRBV9A0A0B4J1U6 114 aa4.07□□□□□ -1.76
CPSF7-220ENST00000541963 H0Y980 276 aa4.07□□□□□ -1.76
CPSF7-220ENST00000541963 TCAPO15273 167 aa4.07□□□□□ -1.76
CPSF7-220ENST00000541963 NDUFS6O75380 124 aaKnown RBP4.07□□□□□ -1.76
CPSF7-220ENST00000541963 OR2J3O76001 311 aa4.07□□□□□ -1.76
CPSF7-220ENST00000541963 S1PR2O95136 353 aa4.07□□□□□ -1.76
CPSF7-220ENST00000541963 KRASP01116 189 aa4.07□□□□□ -1.76
CPSF7-220ENST00000541963 CD3DP04234 171 aa4.07□□□□□ -1.76
CPSF7-220ENST00000541963 OR5AC1P0C628 307 aa4.07□□□□□ -1.76
CPSF7-220ENST00000541963 OR4E1P0C645 316 aa4.07□□□□□ -1.76
CPSF7-220ENST00000541963 H2BFSP57053 126 aa4.07□□□□□ -1.76
CPSF7-220ENST00000541963 OR2B8PP59922 312 aa4.07□□□□□ -1.76
CPSF7-220ENST00000541963 RND3P61587 244 aa4.07□□□□□ -1.76
CPSF7-220ENST00000541963 SCGB2B2Q4G0G5 96 aa4.07□□□□□ -1.76
CPSF7-220ENST00000541963 FAM74A1Q5RGS3 127 aa4.07□□□□□ -1.76
CPSF7-220ENST00000541963 STEAP1BQ6NZ63 245 aa4.07□□□□□ -1.76
CPSF7-220ENST00000541963 CD164L2Q6UWJ8 174 aa4.07□□□□□ -1.76
CPSF7-220ENST00000541963 SLC16A13Q7RTY0 426 aa4.07□□□□□ -1.76
CPSF7-220ENST00000541963 H2BFWTQ7Z2G1 175 aa4.07□□□□□ -1.76
CPSF7-220ENST00000541963 CBLN2Q8IUK8 224 aa4.07□□□□□ -1.76
CPSF7-220ENST00000541963 OR1S2Q8NGQ3 325 aa4.07□□□□□ -1.76
CPSF7-220ENST00000541963 OR4A16Q8NH70 328 aa4.07□□□□□ -1.76
CPSF7-220ENST00000541963 LYPD6BQ8NI32 183 aa4.07□□□□□ -1.76
CPSF7-220ENST00000541963 RNASEH2CQ8TDP1 164 aaKnown RBP4.07□□□□□ -1.76
CPSF7-220ENST00000541963 MITD1Q8WV92 249 aa4.07□□□□□ -1.76
CPSF7-220ENST00000541963 EEF1AKMT3Q96AZ1 226 aa4.07□□□□□ -1.76
CPSF7-220ENST00000541963 C2orf48Q96LS8 159 aa4.07□□□□□ -1.76
CPSF7-220ENST00000541963 AQP10Q96PS8 301 aa4.07□□□□□ -1.76
CPSF7-220ENST00000541963 NDUFAF3Q9BU61 184 aa4.07□□□□□ -1.76
CPSF7-220ENST00000541963 C14orf166Q9Y224 244 aaKnown RBP4.07□□□□□ -1.76
CPSF7-220ENST00000541963 ZNF256Q9Y2P7 627 aaPredicted RBP4.07□□□□□ -1.76
CPSF7-220ENST00000541963 OR51B2Q9Y5P1 312 aa4.07□□□□□ -1.76
CPSF7-220ENST00000541963 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.06□□□□□ -1.76
CPSF7-220ENST00000541963 TRBV7-1A0A0A6YYK4 115 aa4.06□□□□□ -1.76
CPSF7-220ENST00000541963 C3orf85A0A1B0GTC6 90 aa4.06□□□□□ -1.76
CPSF7-220ENST00000541963 TEX50A0A1B0GTY4 177 aa4.06□□□□□ -1.76
CPSF7-220ENST00000541963 WI2-2373I1.2A0A1W2PRP0 233 aa4.06□□□□□ -1.76
CPSF7-220ENST00000541963 ZNF705EA8MWA4 302 aaPredicted RBP4.06□□□□□ -1.76
CPSF7-220ENST00000541963 PPP5D1E7EU14 171 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms