RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 OR2T8A6NH00 312 aa10.77□□□□□ -0.68
PTPN1-202ENST00000541713 HIST1H1EP10412 219 aaKnown RBP10.77□□□□□ -0.68
PTPN1-202ENST00000541713 HLA-DMBP28068 263 aa10.77□□□□□ -0.68
PTPN1-202ENST00000541713 PPIFP30405 207 aaKnown RBP10.77□□□□□ -0.68
PTPN1-202ENST00000541713 HNRNPA3P51991 378 aaKnown RBP10.77□□□□□ -0.68
PTPN1-202ENST00000541713 SELENOTP62341 195 aa10.77□□□□□ -0.68
PTPN1-202ENST00000541713 NIT1Q86X76 327 aa10.77□□□□□ -0.68
PTPN1-202ENST00000541713 GTSF1Q8WW33 167 aa10.77□□□□□ -0.68
PTPN1-202ENST00000541713 CSMD2Q7Z408 3487 aa10.77□□□□□ -0.68
PTPN1-202ENST00000541713 PKD1L2Q7Z442 2459 aa10.77□□□□□ -0.69
PTPN1-202ENST00000541713 IGKV3-7A0A075B6H7 116 aa10.77□□□□□ -0.69
PTPN1-202ENST00000541713 hDV102S1A0JD36 115 aa10.77□□□□□ -0.69
PTPN1-202ENST00000541713 GNG7O60262 68 aa10.77□□□□□ -0.69
PTPN1-202ENST00000541713 C2orf88Q9BSF0 95 aa10.77□□□□□ -0.69
PTPN1-202ENST00000541713 SLC25A39Q9BZJ4 359 aaPredicted RBP10.77□□□□□ -0.69
PTPN1-202ENST00000541713 ECSCRQ19T08 205 aa10.77□□□□□ -0.69
PTPN1-202ENST00000541713 MRGPRG-AS1Q2M3A8 158 aa10.77□□□□□ -0.69
PTPN1-202ENST00000541713 GPR82Q96P67 336 aa10.77□□□□□ -0.69
PTPN1-202ENST00000541713 RNF2Q99496 336 aa10.77□□□□□ -0.69
PTPN1-202ENST00000541713 SMIM27A0A1W2PRY6 76 aa10.76□□□□□ -0.69
PTPN1-202ENST00000541713 TCRAP04437 139 aa10.76□□□□□ -0.69
PTPN1-202ENST00000541713 EBLN2Q6P2I7 272 aa10.76□□□□□ -0.69
PTPN1-202ENST00000541713 HTR1DP28221 377 aa10.76□□□□□ -0.69
PTPN1-202ENST00000541713 LGALS7P47929 136 aa10.76□□□□□ -0.69
PTPN1-202ENST00000541713 COMPP49747 757 aaPredicted RBP10.76□□□□□ -0.69
PTPN1-202ENST00000541713 C8orf49Q96NF6 230 aa10.75□□□□□ -0.69
PTPN1-202ENST00000541713 MIEN1Q9BRT3 115 aa10.75□□□□□ -0.69
PTPN1-202ENST00000541713 TMUB1Q9BVT8 246 aa10.75□□□□□ -0.69
PTPN1-202ENST00000541713 CCDC168Q8NDH2 2452 aa10.75□□□□□ -0.69
PTPN1-202ENST00000541713 IGKV2-40A0A087WW87 121 aaPredicted RBP10.75□□□□□ -0.69
PTPN1-202ENST00000541713 IGKV2D-40P01614 121 aaPredicted RBP10.75□□□□□ -0.69
PTPN1-202ENST00000541713 DLX6P56179 175 aa10.75□□□□□ -0.69
PTPN1-202ENST00000541713 TMEM75Q8N9X5 138 aa10.75□□□□□ -0.69
PTPN1-202ENST00000541713 OR8B3Q8NGG8 313 aa10.75□□□□□ -0.69
PTPN1-202ENST00000541713 GRAMD2BQ96HH9 432 aa10.75□□□□□ -0.69
PTPN1-202ENST00000541713 PAX1P15863 534 aa10.75□□□□□ -0.69
PTPN1-202ENST00000541713 RAB4AP20338 218 aa10.75□□□□□ -0.69
PTPN1-202ENST00000541713 SPATA12Q7Z6I5 190 aa10.75□□□□□ -0.69
PTPN1-202ENST00000541713 DEFB104AQ8WTQ1 72 aa10.75□□□□□ -0.69
PTPN1-202ENST00000541713 RPP21Q9H633 154 aaKnown RBP10.75□□□□□ -0.69
PTPN1-202ENST00000541713 ZANQ9Y493 2812 aa10.75□□□□□ -0.69
PTPN1-202ENST00000541713 B9A039 149 aa10.74□□□□□ -0.69
PTPN1-202ENST00000541713 ARMS2P0C7Q2 107 aa10.74□□□□□ -0.69
PTPN1-202ENST00000541713 ZC2HC1AQ96GY0 325 aa10.74□□□□□ -0.69
PTPN1-202ENST00000541713 F11RQ9Y624 299 aaKnown RBP10.74□□□□□ -0.69
PTPN1-202ENST00000541713 IGKV1-17P01599 117 aa10.74□□□□□ -0.69
PTPN1-202ENST00000541713 MT-ND6P03923 174 aa10.74□□□□□ -0.69
PTPN1-202ENST00000541713 ETFRF1Q6IPR1 90 aa10.74□□□□□ -0.69
PTPN1-202ENST00000541713 UNQ5815/PRO19632Q6UWF5 114 aa10.74□□□□□ -0.69
PTPN1-202ENST00000541713 SMKR1H3BMG3 65 aa10.74□□□□□ -0.69
PTPN1-202ENST00000541713 TCF21O43680 179 aa10.74□□□□□ -0.69
PTPN1-202ENST00000541713 RPLP1P05386 114 aaKnown RBP10.74□□□□□ -0.69
PTPN1-202ENST00000541713 IGLC1P0CG04 106 aa10.74□□□□□ -0.69
PTPN1-202ENST00000541713 Q0VG73 95 aa10.74□□□□□ -0.69
PTPN1-202ENST00000541713 C21orf62-AS1Q17RA5 79 aa10.74□□□□□ -0.69
PTPN1-202ENST00000541713 C19orf24Q9BVV8 132 aa10.74□□□□□ -0.69
PTPN1-202ENST00000541713 TEX22C9J3V5 150 aa10.73□□□□□ -0.69
PTPN1-202ENST00000541713 SPRY2O43597 315 aa10.73□□□□□ -0.69
PTPN1-202ENST00000541713 FOSL1P15407 271 aa10.73□□□□□ -0.69
PTPN1-202ENST00000541713 DYNAPQ8N1N2 210 aa10.73□□□□□ -0.69
PTPN1-202ENST00000541713 STPG4Q8N801 248 aa10.73□□□□□ -0.69
PTPN1-202ENST00000541713 UBTD1Q9HAC8 227 aa10.73□□□□□ -0.69
PTPN1-202ENST00000541713 KIR2DL5BA0A0G2JN68 375 aa10.73□□□□□ -0.69
PTPN1-202ENST00000541713 KIR2DL5BA0A0G2JPC4 375 aa10.73□□□□□ -0.69
PTPN1-202ENST00000541713 KIR2DL5AQ8N109 375 aa10.73□□□□□ -0.69
PTPN1-202ENST00000541713 C5orf17Q8NAS9 161 aa10.73□□□□□ -0.69
PTPN1-202ENST00000541713 LINC00574Q9H8X3 128 aa10.73□□□□□ -0.69
PTPN1-202ENST00000541713 A8MWL6 223 aa10.72□□□□□ -0.69
PTPN1-202ENST00000541713 HBBP68871 147 aa10.72□□□□□ -0.69
PTPN1-202ENST00000541713 TMEM116Q8NCL8 245 aa10.72□□□□□ -0.69
PTPN1-202ENST00000541713 BEND2Q8NDZ0 799 aa10.72□□□□□ -0.69
PTPN1-202ENST00000541713 OR4F17Q8NGA8 305 aa10.72□□□□□ -0.69
PTPN1-202ENST00000541713 C8orf46Q8TAG6 207 aa10.72□□□□□ -0.69
PTPN1-202ENST00000541713 ALKBH7Q9BT30 221 aaPredicted RBP10.72□□□□□ -0.69
PTPN1-202ENST00000541713 TMEM208Q9BTX3 173 aa10.72□□□□□ -0.69
PTPN1-202ENST00000541713 ITPR1Q14643 2758 aa10.72□□□□□ -0.69
PTPN1-202ENST00000541713 FAM181BA6NEQ2 426 aa10.72□□□□□ -0.69
PTPN1-202ENST00000541713 IGLV1-47P01700 117 aa10.72□□□□□ -0.69
PTPN1-202ENST00000541713 GP9P14770 177 aa10.72□□□□□ -0.69
PTPN1-202ENST00000541713 TEX43Q6ZNM6 134 aa10.72□□□□□ -0.69
PTPN1-202ENST00000541713 MBD6Q96DN6 1003 aa10.72□□□□□ -0.69
PTPN1-202ENST00000541713 WNK1Q9H4A3 2382 aa10.72□□□□□ -0.69
PTPN1-202ENST00000541713 CFAP46Q8IYW2 2715 aa10.72□□□□□ -0.69
PTPN1-202ENST00000541713 TEX45Q8NA69 505 aa10.72□□□□□ -0.69
PTPN1-202ENST00000541713 LIPFP07098 398 aa10.71□□□□□ -0.69
PTPN1-202ENST00000541713 OR8A1Q8NGG7 326 aa10.71□□□□□ -0.69
PTPN1-202ENST00000541713 LY96Q9Y6Y9 160 aa10.71□□□□□ -0.69
PTPN1-202ENST00000541713 TMEM213A2RRL7 107 aa10.71□□□□□ -0.69
PTPN1-202ENST00000541713 NPIPB5A8MRT5 1133 aa10.71□□□□□ -0.69
PTPN1-202ENST00000541713 FSTL3O95633 263 aa10.71□□□□□ -0.69
PTPN1-202ENST00000541713 CA7P43166 264 aa10.71□□□□□ -0.69
PTPN1-202ENST00000541713 NDPQ00604 133 aa10.71□□□□□ -0.69
PTPN1-202ENST00000541713 ZNF124Q15973 351 aa10.71□□□□□ -0.69
PTPN1-202ENST00000541713 Q8N976 141 aa10.71□□□□□ -0.69
PTPN1-202ENST00000541713 NCOR1P1Q9H4R4 102 aa10.71□□□□□ -0.69
PTPN1-202ENST00000541713 LOC105371242A0A075B767 164 aa10.71□□□□□ -0.7
PTPN1-202ENST00000541713 NCR2O95944 276 aa10.71□□□□□ -0.7
PTPN1-202ENST00000541713 FAM106CPP0CH98 169 aa10.71□□□□□ -0.7
PTPN1-202ENST00000541713 FAM106AQ4KMX7 169 aa10.71□□□□□ -0.7
PTPN1-202ENST00000541713 TMEM219Q86XT9 240 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms