RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 HILPDAQ9Y5L2 63 aa9.96□□□□□ -0.82
RNF4-222ENST00000541204 IGLV1-47P01700 117 aa9.95□□□□□ -0.82
RNF4-222ENST00000541204 P01737 135 aa9.95□□□□□ -0.82
RNF4-222ENST00000541204 CRYGCP07315 174 aa9.95□□□□□ -0.82
RNF4-222ENST00000541204 ETFRF1Q6IPR1 90 aa9.95□□□□□ -0.82
RNF4-222ENST00000541204 C8orf31Q8N9H6 132 aa9.95□□□□□ -0.82
RNF4-222ENST00000541204 RAB1BQ9H0U4 201 aa9.95□□□□□ -0.82
RNF4-222ENST00000541204 FBXL15Q9H469 300 aa9.95□□□□□ -0.82
RNF4-222ENST00000541204 GP9P14770 177 aa9.95□□□□□ -0.82
RNF4-222ENST00000541204 ZNF137PP52743 207 aa9.95□□□□□ -0.82
RNF4-222ENST00000541204 KLRD1Q13241 179 aa9.95□□□□□ -0.82
RNF4-222ENST00000541204 TRGV9Q99603 122 aa9.95□□□□□ -0.82
RNF4-222ENST00000541204 PRSS22Q9GZN4 317 aa9.95□□□□□ -0.82
RNF4-222ENST00000541204 Q9H3A6 140 aa9.95□□□□□ -0.82
RNF4-222ENST00000541204 A8MWL6 223 aa9.94□□□□□ -0.82
RNF4-222ENST00000541204 NDUFS7O75251 213 aa9.94□□□□□ -0.82
RNF4-222ENST00000541204 TOMM40O96008 361 aa9.94□□□□□ -0.82
RNF4-222ENST00000541204 LTAP01374 205 aa9.94□□□□□ -0.82
RNF4-222ENST00000541204 TCRAP04437 139 aa9.94□□□□□ -0.82
RNF4-222ENST00000541204 C5orf17Q8NAS9 161 aa9.94□□□□□ -0.82
RNF4-222ENST00000541204 SMIM12Q96EX1 92 aa9.94□□□□□ -0.82
RNF4-222ENST00000541204 FMC1Q96HJ9 113 aa9.94□□□□□ -0.82
RNF4-222ENST00000541204 TP73-AS1Q9UF72 201 aa9.94□□□□□ -0.82
RNF4-222ENST00000541204 TRAV8-1A0A0A6YYK1 113 aa9.94□□□□□ -0.82
RNF4-222ENST00000541204 C19orf71A6NCJ1 209 aa9.94□□□□□ -0.82
RNF4-222ENST00000541204 TOX4O94842 621 aa9.94□□□□□ -0.82
RNF4-222ENST00000541204 PLGLAQ15195 96 aa9.94□□□□□ -0.82
RNF4-222ENST00000541204 LDLRAD2Q5SZI1 272 aa9.94□□□□□ -0.82
RNF4-222ENST00000541204 C22orf15Q8WYQ4 148 aa9.94□□□□□ -0.82
RNF4-222ENST00000541204 MRPS16Q9Y3D3 137 aaKnown RBP9.94□□□□□ -0.82
RNF4-222ENST00000541204 PIEZO1Q92508 2521 aa9.94□□□□□ -0.82
RNF4-222ENST00000541204 MAP1AP78559 2803 aaPredicted RBP9.93□□□□□ -0.82
RNF4-222ENST00000541204 A0A1W2PPR1 153 aa9.93□□□□□ -0.82
RNF4-222ENST00000541204 RPL27AP46776 148 aaKnown RBP9.93□□□□□ -0.82
RNF4-222ENST00000541204 LGALS7P47929 136 aa9.93□□□□□ -0.82
RNF4-222ENST00000541204 FAM120AOSQ5T036 256 aa9.93□□□□□ -0.82
RNF4-222ENST00000541204 UNQ5815/PRO19632Q6UWF5 114 aa9.93□□□□□ -0.82
RNF4-222ENST00000541204 LINC00173Q6ZV60 143 aa9.93□□□□□ -0.82
RNF4-222ENST00000541204 Q71RC1 249 aaPredicted RBP9.93□□□□□ -0.82
RNF4-222ENST00000541204 TMEM116Q8NCL8 245 aa9.93□□□□□ -0.82
RNF4-222ENST00000541204 TMEM70Q9BUB7 260 aa9.93□□□□□ -0.82
RNF4-222ENST00000541204 PKD1L2Q7Z442 2459 aa9.93□□□□□ -0.82
RNF4-222ENST00000541204 WNK2Q9Y3S1 2297 aa9.93□□□□□ -0.82
RNF4-222ENST00000541204 UQCRFS1P47985 274 aa9.93□□□□□ -0.82
RNF4-222ENST00000541204 DAZAP1Q96EP5 407 aaKnown RBP9.93□□□□□ -0.82
RNF4-222ENST00000541204 RBM14Q96PK6 669 aaKnown RBP9.93□□□□□ -0.82
RNF4-222ENST00000541204 SIGLEC9Q9Y336 463 aa9.93□□□□□ -0.82
RNF4-222ENST00000541204 IGHV1-24A0A0C4DH33 117 aa9.92□□□□□ -0.82
RNF4-222ENST00000541204 CIARTQ8N365 385 aaPredicted RBP9.92□□□□□ -0.82
RNF4-222ENST00000541204 OR4F17Q8NGA8 305 aa9.92□□□□□ -0.82
RNF4-222ENST00000541204 C8orf46Q8TAG6 207 aa9.92□□□□□ -0.82
RNF4-222ENST00000541204 TIMD4Q96H15 378 aa9.92□□□□□ -0.82
RNF4-222ENST00000541204 TIMM23O14925 209 aa9.92□□□□□ -0.82
RNF4-222ENST00000541204 LIPFP07098 398 aa9.92□□□□□ -0.82
RNF4-222ENST00000541204 PRB4P10163 310 aaPredicted RBP9.92□□□□□ -0.82
RNF4-222ENST00000541204 LYZP61626 148 aa9.92□□□□□ -0.82
RNF4-222ENST00000541204 PVRIGQ6DKI7 326 aa9.92□□□□□ -0.82
RNF4-222ENST00000541204 PPP1R14DQ9NXH3 145 aa9.92□□□□□ -0.82
RNF4-222ENST00000541204 C20orf202A1L168 122 aa9.92□□□□□ -0.82
RNF4-222ENST00000541204 OR4C46A6NHA9 309 aa9.92□□□□□ -0.82
RNF4-222ENST00000541204 CT83Q5H943 113 aa9.92□□□□□ -0.82
RNF4-222ENST00000541204 RBPMS2Q6ZRY4 209 aaKnown RBP9.92□□□□□ -0.82
RNF4-222ENST00000541204 PPP1R27Q86WC6 154 aa9.92□□□□□ -0.82
RNF4-222ENST00000541204 EXOC3-AS1Q8N2X6 119 aa9.92□□□□□ -0.82
RNF4-222ENST00000541204 TEX45Q8NA69 505 aa9.92□□□□□ -0.82
RNF4-222ENST00000541204 ZNF492Q9P255 531 aa9.92□□□□□ -0.82
RNF4-222ENST00000541204 CCL25O15444 150 aa9.91□□□□□ -0.82
RNF4-222ENST00000541204 PSG1P11464 419 aa9.91□□□□□ -0.82
RNF4-222ENST00000541204 COL8A1P27658 744 aa9.91□□□□□ -0.82
RNF4-222ENST00000541204 ZNF138P52744 262 aa9.91□□□□□ -0.82
RNF4-222ENST00000541204 HIGD1AQ9Y241 93 aa9.91□□□□□ -0.82
RNF4-222ENST00000541204 PRNTQ86SH4 94 aa9.91□□□□□ -0.82
RNF4-222ENST00000541204 Q86TA4 180 aa9.91□□□□□ -0.82
RNF4-222ENST00000541204 ORAOV1Q8WV07 137 aa9.91□□□□□ -0.82
RNF4-222ENST00000541204 UBTD1Q9HAC8 227 aa9.91□□□□□ -0.82
RNF4-222ENST00000541204 SYS1-DBNDD2H3BUS1 97 aa9.9□□□□□ -0.82
RNF4-222ENST00000541204 CHEK1O14757 476 aa9.9□□□□□ -0.82
RNF4-222ENST00000541204 LEPROTL1O95214 131 aa9.9□□□□□ -0.82
RNF4-222ENST00000541204 CNIH1O95406 144 aa9.9□□□□□ -0.82
RNF4-222ENST00000541204 SFTPCP11686 197 aa9.9□□□□□ -0.82
RNF4-222ENST00000541204 PTTG1IPP53801 180 aa9.9□□□□□ -0.82
RNF4-222ENST00000541204 GOLT1AQ6ZVE7 132 aa9.9□□□□□ -0.82
RNF4-222ENST00000541204 TNFRSF14Q92956 283 aa9.9□□□□□ -0.82
RNF4-222ENST00000541204 ASCL2Q99929 193 aa9.9□□□□□ -0.82
RNF4-222ENST00000541204 SOX21Q9Y651 276 aaPredicted RBP9.9□□□□□ -0.82
RNF4-222ENST00000541204 LOC105371242A0A075B767 164 aa9.9□□□□□ -0.83
RNF4-222ENST00000541204 hDV102S1A0JD36 115 aa9.9□□□□□ -0.83
RNF4-222ENST00000541204 CRXO43186 299 aaPredicted RBP9.9□□□□□ -0.83
RNF4-222ENST00000541204 CRYGBP07316 175 aa9.9□□□□□ -0.83
RNF4-222ENST00000541204 HES1Q14469 280 aa9.9□□□□□ -0.83
RNF4-222ENST00000541204 FBLN7Q53RD9 439 aa9.9□□□□□ -0.83
RNF4-222ENST00000541204 CHCHD1Q96BP2 118 aaKnown RBP9.9□□□□□ -0.83
RNF4-222ENST00000541204 GFRA4Q9GZZ7 299 aa9.9□□□□□ -0.83
RNF4-222ENST00000541204 F11RQ9Y624 299 aaKnown RBP9.9□□□□□ -0.83
RNF4-222ENST00000541204 COX11Q9Y6N1 276 aa9.9□□□□□ -0.83
RNF4-222ENST00000541204 LOC102724200A0A096LPH7 203 aaPredicted RBP9.89□□□□□ -0.83
RNF4-222ENST00000541204 TEX22C9J3V5 150 aa9.89□□□□□ -0.83
RNF4-222ENST00000541204 PLP1P60201 277 aa9.89□□□□□ -0.83
RNF4-222ENST00000541204 RELQ04864 619 aaPredicted RBP9.89□□□□□ -0.83
RNF4-222ENST00000541204 FAM162BQ5T6X4 162 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms