RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 RSG1Q9BU20 258 aa6.79□□□□□ -1.32
SNHG1-215ENST00000540904 RNF126Q9BV68 326 aa6.79□□□□□ -1.32
SNHG1-215ENST00000540904 ARV1Q9H2C2 271 aa6.79□□□□□ -1.32
SNHG1-215ENST00000540904 EDA2RQ9HAV5 297 aa6.79□□□□□ -1.32
SNHG1-215ENST00000540904 WDR83OSQ9Y284 106 aa6.79□□□□□ -1.32
SNHG1-215ENST00000540904 SOCS3O14543 225 aa6.78□□□□□ -1.32
SNHG1-215ENST00000540904 COX7A2P2O60397 106 aa6.78□□□□□ -1.32
SNHG1-215ENST00000540904 MPC2O95563 127 aa6.78□□□□□ -1.32
SNHG1-215ENST00000540904 CA1P00915 261 aaPredicted RBP6.78□□□□□ -1.32
SNHG1-215ENST00000540904 CXCL3P19876 107 aa6.78□□□□□ -1.32
SNHG1-215ENST00000540904 FGF7P21781 194 aa6.78□□□□□ -1.32
SNHG1-215ENST00000540904 PSMB3P49720 205 aa6.78□□□□□ -1.32
SNHG1-215ENST00000540904 FGL1Q08830 312 aa6.78□□□□□ -1.32
SNHG1-215ENST00000540904 CLINT1Q14677 625 aa6.78□□□□□ -1.32
SNHG1-215ENST00000540904 ATP6V1FQ16864 119 aa6.78□□□□□ -1.32
SNHG1-215ENST00000540904 RGS21Q2M5E4 152 aa6.78□□□□□ -1.32
SNHG1-215ENST00000540904 PXDC1Q5TGL8 231 aa6.78□□□□□ -1.32
SNHG1-215ENST00000540904 MIC13Q5XKP0 118 aa6.78□□□□□ -1.32
SNHG1-215ENST00000540904 PATE2Q6UY27 113 aa6.78□□□□□ -1.32
SNHG1-215ENST00000540904 TRPT1Q86TN4 253 aaKnown RBP6.78□□□□□ -1.32
SNHG1-215ENST00000540904 OR5C1Q8NGR4 320 aa6.78□□□□□ -1.32
SNHG1-215ENST00000540904 MUC7Q8TAX7 377 aa6.78□□□□□ -1.32
SNHG1-215ENST00000540904 THAP6Q8TBB0 222 aa6.78□□□□□ -1.32
SNHG1-215ENST00000540904 MED28Q9H204 178 aa6.78□□□□□ -1.32
SNHG1-215ENST00000540904 SEPSECSQ9HD40 501 aaKnown RBP6.78□□□□□ -1.32
SNHG1-215ENST00000540904 TP53TG1Q9Y2A0 90 aa6.78□□□□□ -1.32
SNHG1-215ENST00000540904 ELOA3CA0A087WX78 387 aaPredicted RBP6.77□□□□□ -1.33
SNHG1-215ENST00000540904 ISLRO14498 428 aa6.77□□□□□ -1.33
SNHG1-215ENST00000540904 RPL7P18124 248 aaKnown RBP6.77□□□□□ -1.33
SNHG1-215ENST00000540904 ATF4P18848 351 aaPredicted RBP6.77□□□□□ -1.33
SNHG1-215ENST00000540904 MEOX2P50222 304 aa6.77□□□□□ -1.33
SNHG1-215ENST00000540904 DEFB1P60022 68 aa6.77□□□□□ -1.33
SNHG1-215ENST00000540904 FCN2Q15485 313 aa6.77□□□□□ -1.33
SNHG1-215ENST00000540904 SAMD13Q5VXD3 122 aa6.77□□□□□ -1.33
SNHG1-215ENST00000540904 C10orf113Q5VZT2 155 aa6.77□□□□□ -1.33
SNHG1-215ENST00000540904 Q6ZRG5 221 aa6.77□□□□□ -1.33
SNHG1-215ENST00000540904 LINC00305Q7Z4B0 112 aa6.77□□□□□ -1.33
SNHG1-215ENST00000540904 OR11H7Q8NGC8 314 aa6.77□□□□□ -1.33
SNHG1-215ENST00000540904 RNF183Q96D59 192 aa6.77□□□□□ -1.33
SNHG1-215ENST00000540904 C16orf92Q96LL3 132 aa6.77□□□□□ -1.33
SNHG1-215ENST00000540904 MBD2Q9UBB5 411 aa6.77□□□□□ -1.33
SNHG1-215ENST00000540904 H3BMM0 161 aa6.76□□□□□ -1.33
SNHG1-215ENST00000540904 C3orf84H3BNL1 204 aa6.76□□□□□ -1.33
SNHG1-215ENST00000540904 MPDU1O75352 247 aa6.76□□□□□ -1.33
SNHG1-215ENST00000540904 IGKV3-20P01619 116 aa6.76□□□□□ -1.33
SNHG1-215ENST00000540904 SPP1P10451 314 aa6.76□□□□□ -1.33
SNHG1-215ENST00000540904 LYL1P12980 280 aa6.76□□□□□ -1.33
SNHG1-215ENST00000540904 RPL29P47914 159 aaKnown RBP6.76□□□□□ -1.33
SNHG1-215ENST00000540904 B2MP61769 119 aa6.76□□□□□ -1.33
SNHG1-215ENST00000540904 GDF5OSQ5U4N7 250 aa6.76□□□□□ -1.33
SNHG1-215ENST00000540904 MORN5Q5VZ52 161 aa6.76□□□□□ -1.33
SNHG1-215ENST00000540904 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.76□□□□□ -1.33
SNHG1-215ENST00000540904 TMEM37Q8WXS4 190 aa6.76□□□□□ -1.33
SNHG1-215ENST00000540904 C20orf173Q96LM9 149 aa6.76□□□□□ -1.33
SNHG1-215ENST00000540904 C17orf77Q96MU5 243 aa6.76□□□□□ -1.33
SNHG1-215ENST00000540904 DNAJC4Q9NNZ3 241 aa6.76□□□□□ -1.33
SNHG1-215ENST00000540904 SLC39A9Q9NUM3 307 aa6.76□□□□□ -1.33
SNHG1-215ENST00000540904 RNF24Q9Y225 148 aa6.76□□□□□ -1.33
SNHG1-215ENST00000540904 PXMP4Q9Y6I8 212 aa6.76□□□□□ -1.33
SNHG1-215ENST00000540904 DNAH9Q9NYC9 4486 aa6.76□□□□□ -1.33
SNHG1-215ENST00000540904 NBEAL2Q6ZNJ1 2754 aa6.75□□□□□ -1.33
SNHG1-215ENST00000540904 A0A0J9YWU9 116 aa6.75□□□□□ -1.33
SNHG1-215ENST00000540904 SNRPCP09234 159 aaKnown RBP6.75□□□□□ -1.33
SNHG1-215ENST00000540904 GIG44P09565 113 aaPredicted RBP6.75□□□□□ -1.33
SNHG1-215ENST00000540904 HLA-DRB4P13762 266 aa6.75□□□□□ -1.33
SNHG1-215ENST00000540904 C4BPBP20851 252 aa6.75□□□□□ -1.33
SNHG1-215ENST00000540904 RPL12P30050 165 aaKnown RBP6.75□□□□□ -1.33
SNHG1-215ENST00000540904 NUTF2P61970 127 aaKnown RBP6.75□□□□□ -1.33
SNHG1-215ENST00000540904 OPCMLQ14982 345 aa6.75□□□□□ -1.33
SNHG1-215ENST00000540904 IGFL4Q6B9Z1 124 aa6.75□□□□□ -1.33
SNHG1-215ENST00000540904 ZFAND6Q6FIF0 208 aa6.75□□□□□ -1.33
SNHG1-215ENST00000540904 MORN3Q6PF18 240 aaPredicted RBP6.75□□□□□ -1.33
SNHG1-215ENST00000540904 FOXI2Q6ZQN5 318 aa6.75□□□□□ -1.33
SNHG1-215ENST00000540904 RNF182Q8N6D2 247 aa6.75□□□□□ -1.33
SNHG1-215ENST00000540904 ZNF709Q8N972 641 aa6.75□□□□□ -1.33
SNHG1-215ENST00000540904 OR1L4Q8NGR5 311 aa6.75□□□□□ -1.33
SNHG1-215ENST00000540904 LRRC20Q8TCA0 184 aa6.75□□□□□ -1.33
SNHG1-215ENST00000540904 GATAD1Q8WUU5 269 aa6.75□□□□□ -1.33
SNHG1-215ENST00000540904 CHAC2Q8WUX2 184 aa6.75□□□□□ -1.33
SNHG1-215ENST00000540904 PFDN5Q99471 154 aa6.75□□□□□ -1.33
SNHG1-215ENST00000540904 ATP5SQ99766 215 aa6.75□□□□□ -1.33
SNHG1-215ENST00000540904 RARRES2Q99969 163 aa6.75□□□□□ -1.33
SNHG1-215ENST00000540904 NPCDR1Q9BY65 106 aa6.75□□□□□ -1.33
SNHG1-215ENST00000540904 SMIM3Q9BZL3 60 aa6.75□□□□□ -1.33
SNHG1-215ENST00000540904 SAV1Q9H4B6 383 aaPredicted RBP6.75□□□□□ -1.33
SNHG1-215ENST00000540904 RPRMQ9NS64 109 aa6.75□□□□□ -1.33
SNHG1-215ENST00000540904 HSPB11Q9Y547 144 aa6.75□□□□□ -1.33
SNHG1-215ENST00000540904 HLA-DRB4X5D2U9 266 aa6.75□□□□□ -1.33
SNHG1-215ENST00000540904 TENM3Q9P273 2699 aa6.75□□□□□ -1.33
SNHG1-215ENST00000540904 STAB2Q8WWQ8 2551 aa6.75□□□□□ -1.33
SNHG1-215ENST00000540904 TRAV8-2A0A0B4J237 113 aa6.74□□□□□ -1.33
SNHG1-215ENST00000540904 F6UB75 175 aa6.74□□□□□ -1.33
SNHG1-215ENST00000540904 OXA1LQ15070 435 aa6.74□□□□□ -1.33
SNHG1-215ENST00000540904 TMEM41BQ5BJD5 291 aa6.74□□□□□ -1.33
SNHG1-215ENST00000540904 GCSAMLQ5JQS6 135 aa6.74□□□□□ -1.33
SNHG1-215ENST00000540904 CASC10Q5T4H9 136 aa6.74□□□□□ -1.33
SNHG1-215ENST00000540904 EBLN2Q6P2I7 272 aa6.74□□□□□ -1.33
SNHG1-215ENST00000540904 BPIFA4PQ86YQ2 179 aa6.74□□□□□ -1.33
SNHG1-215ENST00000540904 ZNF738Q8NE65 137 aa6.74□□□□□ -1.33
SNHG1-215ENST00000540904 OR4B1Q8NGF8 309 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms