RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	SPRN	Q5BIV9	151 aa		4.55	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	BLNK	Q8WV28	456 aa		4.55	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	PLXNB1	O43157	2135 aa		4.55	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	CD5L	O43866	347 aa		4.55	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	SAP30	O75446	220 aa		4.55	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	REG1A	P05451	166 aa		4.55	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	PRTN3	P24158	256 aa		4.55	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	BVES-AS1	Q5T3Y7	98 aa		4.55	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	DUX4L9	Q6RFH8	374 aa	Predicted RBP	4.55	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	S100A7A	Q86SG5	101 aa		4.55	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	PNKD	Q8N490	385 aa		4.55	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	PGLYRP4	Q96LB8	373 aa		4.55	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	MRPL27	Q9P0M9	148 aa	Known RBP	4.55	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	HIVEP3	Q5T1R4	2406 aa		4.54	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	CFAP47	Q6ZTR5	3102 aa		4.54	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	TRAV8-6	A0A0B4J262	113 aa		4.54	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	KBTBD11-OT1	A0A1B0GTJ5	212 aa		4.54	□□□□□ -1.68
RAPGEF4-215	ENST00000540783		A0A1W2PRD5	423 aa		4.54	□□□□□ -1.68
RAPGEF4-215	ENST00000540783		A0A1W2PRF3	423 aa		4.54	□□□□□ -1.68
RAPGEF4-215	ENST00000540783		A0A1W2PRM7	423 aa		4.54	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	LY6H	O94772	140 aa		4.54	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	IGKV1-16	P04430	117 aa		4.54	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	SAA2	P0DJI9	122 aa	Predicted RBP	4.54	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	C8orf88	P0DMB2	117 aa		4.54	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	PSG9	Q00887	426 aa		4.54	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	CT45A1	Q5HYN5	189 aa		4.54	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	HIST2H2BC	Q6DN03	193 aa		4.54	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	CT45A3	Q8NHU0	189 aa		4.54	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	SLC25A33	Q9BSK2	321 aa		4.54	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	IGKV1D-17	A0A075B6S4	117 aa		4.54	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	IGHV4-61	A0A0C4DH41	118 aa		4.54	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	NCBP2L	A6PVI3	153 aa	Known RBP	4.54	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	SRRM4	A7MD48	611 aa	Known RBP	4.54	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	TAS2R45	P59539	299 aa		4.54	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	COX19	Q49B96	90 aa		4.54	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	KHDC1L	Q5JSQ8	128 aa		4.54	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	SLC25A34	Q6PIV7	304 aa		4.54	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	OR4S2	Q8NH73	311 aa		4.54	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	NRGN	Q92686	78 aa		4.54	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	ASCL2	Q99929	193 aa		4.54	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	TMEM133	Q9H2Q1	129 aa		4.54	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	ITPR3	Q14573	2671 aa		4.54	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	DYSF	O75923	2080 aa		4.54	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	SMG1	Q96Q15	3661 aa	Known RBP	4.54	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	TRAV40	A0A0B4J280	105 aa		4.54	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	SYS1-DBNDD2	H3BUS1	97 aa		4.54	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	NDUFS7	O75251	213 aa		4.54	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	LEPROTL1	O95214	131 aa		4.54	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	SUB1	P53999	127 aa	Known RBP eCLIP	4.54	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	LOXL3	P58215	753 aa		4.54	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	LINC00322	Q6ZN03	302 aa	Predicted RBP	4.54	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	4.54	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	GAFA1	Q96PS6	74 aa		4.54	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	SLC25A2	Q9BXI2	301 aa		4.54	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	PCSK5	Q92824	1860 aa		4.53	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	IGHV1-24	A0A0C4DH33	117 aa		4.53	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	GAGE12B	A1L429	117 aa		4.53	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	FAM120AOS	Q5T036	256 aa		4.53	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	GRAMD2B	Q96HH9	432 aa		4.53	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	FAM167A-AS1	Q96KT0	104 aa		4.53	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	MEGF9	Q9H1U4	602 aa		4.53	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	FNDC4	Q9H6D8	234 aa	Predicted RBP	4.53	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	IGHV3-21	A0A0B4J1V1	117 aa		4.53	□□□□□ -1.68
RAPGEF4-215	ENST00000540783		A0A1W2PRE2	83 aa		4.53	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	PEX7	O00628	323 aa		4.53	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	OXLD1	Q5BKU9	147 aa		4.53	□□□□□ -1.68
RAPGEF4-215	ENST00000540783		Q71RC1	249 aa	Predicted RBP	4.53	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	SMIM15	Q7Z3B0	74 aa		4.53	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	TEX45	Q8NA69	505 aa		4.53	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	PAXX	Q9BUH6	204 aa		4.53	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	GSX1	Q9H4S2	264 aa	Predicted RBP	4.53	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	TMEM14B	Q9NUH8	114 aa		4.53	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	YLPM1	P49750	1951 aa	Known RBP	4.53	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	TEP1	Q99973	2627 aa	Known RBP	4.53	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	HSBP1L1	C9JCN9	74 aa		4.53	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	NPFF	O15130	113 aa		4.53	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	APELA	P0DMC3	54 aa		4.53	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	REG1B	P48304	166 aa		4.53	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	UBE2E1	P51965	193 aa		4.53	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	TMEM116	Q8NCL8	245 aa		4.53	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	DDB2	Q92466	427 aa		4.53	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	CORO2A	Q92828	525 aa		4.53	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	PRSS22	Q9GZN4	317 aa		4.53	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	COMMD5	Q9GZQ3	224 aa		4.53	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	BSN	Q9UPA5	3926 aa		4.52	□□□□□ -1.69
RAPGEF4-215	ENST00000540783	TEX50	A0A1B0GTY4	177 aa		4.52	□□□□□ -1.69
RAPGEF4-215	ENST00000540783	FAM90A9P	A6NNJ1	464 aa		4.52	□□□□□ -1.69
RAPGEF4-215	ENST00000540783		E7EUB6	86 aa		4.52	□□□□□ -1.69
RAPGEF4-215	ENST00000540783	COX7A2P2	O60397	106 aa		4.52	□□□□□ -1.69
RAPGEF4-215	ENST00000540783	SLC25A5	P05141	298 aa	Known RBP	4.52	□□□□□ -1.69
RAPGEF4-215	ENST00000540783	TMEM11	P17152	192 aa		4.52	□□□□□ -1.69
RAPGEF4-215	ENST00000540783	ORM2	P19652	201 aa		4.52	□□□□□ -1.69
RAPGEF4-215	ENST00000540783	RHOG	P84095	191 aa		4.52	□□□□□ -1.69
RAPGEF4-215	ENST00000540783	C10orf55	Q5SWW7	151 aa		4.52	□□□□□ -1.69
RAPGEF4-215	ENST00000540783	ZNF329	Q86UD4	541 aa		4.52	□□□□□ -1.69
RAPGEF4-215	ENST00000540783	DEFB125	Q8N687	156 aa		4.52	□□□□□ -1.69
RAPGEF4-215	ENST00000540783	NPIPB3	Q92617	1050 aa		4.52	□□□□□ -1.69
RAPGEF4-215	ENST00000540783	FOXA2	Q9Y261	457 aa	Predicted RBP	4.52	□□□□□ -1.69
RAPGEF4-215	ENST00000540783	MTOR	P42345	2549 aa		4.52	□□□□□ -1.69
RAPGEF4-215	ENST00000540783	PLCE1	Q9P212	2302 aa		4.52	□□□□□ -1.69

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