RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 DNAH1Q9P2D7 4330 aa12.48□□□□□ -0.41
UBC-208ENST00000540700 HUWE1Q7Z6Z7 4374 aaKnown RBP12.48□□□□□ -0.41
UBC-208ENST00000540700 A0A0D9SG52 128 aa12.47□□□□□ -0.41
UBC-208ENST00000540700 TAAR5O14804 337 aa12.47□□□□□ -0.41
UBC-208ENST00000540700 TSPAN4O14817 238 aa12.47□□□□□ -0.41
UBC-208ENST00000540700 MRPS12O15235 138 aaKnown RBP12.47□□□□□ -0.41
UBC-208ENST00000540700 LCN12Q6JVE5 192 aa12.47□□□□□ -0.41
UBC-208ENST00000540700 Q6ZRG5 221 aa12.47□□□□□ -0.41
UBC-208ENST00000540700 GBGT1Q8N5D6 347 aa12.47□□□□□ -0.41
UBC-208ENST00000540700 FAM24BQ8N5W8 94 aa12.47□□□□□ -0.41
UBC-208ENST00000540700 ZNF709Q8N972 641 aa12.47□□□□□ -0.41
UBC-208ENST00000540700 PPP1R14BQ96C90 147 aa12.47□□□□□ -0.41
UBC-208ENST00000540700 DNAJC4Q9NNZ3 241 aa12.47□□□□□ -0.41
UBC-208ENST00000540700 PLA2G2EQ9NZK7 142 aa12.47□□□□□ -0.41
UBC-208ENST00000540700 TIMM9Q9Y5J7 89 aa12.47□□□□□ -0.41
UBC-208ENST00000540700 TRAV25A0A0B4J276 109 aa12.46□□□□□ -0.41
UBC-208ENST00000540700 C17orf112F2Z3M2 114 aa12.46□□□□□ -0.41
UBC-208ENST00000540700 GUCA2BQ16661 112 aa12.46□□□□□ -0.41
UBC-208ENST00000540700 C10orf113Q5VZT2 155 aa12.46□□□□□ -0.41
UBC-208ENST00000540700 MS4A6AQ9H2W1 248 aa12.46□□□□□ -0.41
UBC-208ENST00000540700 TMEM231Q9H6L2 316 aa12.46□□□□□ -0.41
UBC-208ENST00000540700 SEPSECSQ9HD40 501 aaKnown RBP12.46□□□□□ -0.41
UBC-208ENST00000540700 ZMAT5Q9UDW3 170 aaKnown RBP12.46□□□□□ -0.41
UBC-208ENST00000540700 ELOA3CA0A087WX78 387 aaPredicted RBP12.45□□□□□ -0.42
UBC-208ENST00000540700 CD7P09564 240 aa12.45□□□□□ -0.42
UBC-208ENST00000540700 TFPI2P48307 235 aa12.45□□□□□ -0.42
UBC-208ENST00000540700 RAB2AP61019 212 aa12.45□□□□□ -0.42
UBC-208ENST00000540700 C1orf194Q5T5A4 169 aa12.45□□□□□ -0.42
UBC-208ENST00000540700 SIGLEC15Q6ZMC9 328 aa12.45□□□□□ -0.42
UBC-208ENST00000540700 RBPMS2Q6ZRY4 209 aaKnown RBP12.45□□□□□ -0.42
UBC-208ENST00000540700 MIR17HGQ75NE6 70 aa12.45□□□□□ -0.42
UBC-208ENST00000540700 Q8N1Y9 231 aa12.45□□□□□ -0.42
UBC-208ENST00000540700 OR1L4Q8NGR5 311 aa12.45□□□□□ -0.42
UBC-208ENST00000540700 OR2G3Q8NGZ4 309 aa12.45□□□□□ -0.42
UBC-208ENST00000540700 NARS2Q96I59 477 aaKnown RBP12.45□□□□□ -0.42
UBC-208ENST00000540700 PSMG3Q9BT73 122 aaPredicted RBP12.45□□□□□ -0.42
UBC-208ENST00000540700 C19orf73Q9NVV2 129 aa12.45□□□□□ -0.42
UBC-208ENST00000540700 BORCS7-ASMTA0A0B4J1R7 106 aa12.44□□□□□ -0.42
UBC-208ENST00000540700 KANTRA0A1W2PQU2 76 aa12.44□□□□□ -0.42
UBC-208ENST00000540700 JTBO76095 146 aa12.44□□□□□ -0.42
UBC-208ENST00000540700 BMI1P35226 326 aa12.44□□□□□ -0.42
UBC-208ENST00000540700 WFDC3Q8IUB2 231 aa12.44□□□□□ -0.42
UBC-208ENST00000540700 OR8I2Q8N0Y5 310 aa12.44□□□□□ -0.42
UBC-208ENST00000540700 DCANP1Q8TF63 244 aa12.44□□□□□ -0.42
UBC-208ENST00000540700 GATAD1Q8WUU5 269 aa12.44□□□□□ -0.42
UBC-208ENST00000540700 GRAMD2BQ96HH9 432 aa12.44□□□□□ -0.42
UBC-208ENST00000540700 FAM167A-AS1Q96KT0 104 aa12.44□□□□□ -0.42
UBC-208ENST00000540700 PFDN5Q99471 154 aa12.44□□□□□ -0.42
UBC-208ENST00000540700 SPAG8Q99932 426 aaPredicted RBP12.44□□□□□ -0.42
UBC-208ENST00000540700 ZNF471Q9BX82 626 aaPredicted RBP12.44□□□□□ -0.42
UBC-208ENST00000540700 WFDC10AQ9H1F0 79 aa12.44□□□□□ -0.42
UBC-208ENST00000540700 KCNIP2Q9NS61 270 aa12.44□□□□□ -0.42
UBC-208ENST00000540700 BOLA1Q9Y3E2 137 aa12.44□□□□□ -0.42
UBC-208ENST00000540700 LCE6AA0A183 80 aa12.43□□□□□ -0.42
UBC-208ENST00000540700 SOCS3O14543 225 aa12.43□□□□□ -0.42
UBC-208ENST00000540700 SNRPCP09234 159 aaKnown RBP12.43□□□□□ -0.42
UBC-208ENST00000540700 RPL11P62913 178 aaKnown RBP12.43□□□□□ -0.42
UBC-208ENST00000540700 FAM78BQ5VT40 261 aa12.43□□□□□ -0.42
UBC-208ENST00000540700 STXBP6Q8NFX7 210 aa12.43□□□□□ -0.42
UBC-208ENST00000540700 SLC25A2Q9BXI2 301 aa12.43□□□□□ -0.42
UBC-208ENST00000540700 BOLA2-SMG1P6H3BVE0 249 aa12.42□□□□□ -0.42
UBC-208ENST00000540700 K7EQG2 157 aa12.42□□□□□ -0.42
UBC-208ENST00000540700 PFDN1O60925 122 aa12.42□□□□□ -0.42
UBC-208ENST00000540700 SPP1P10451 314 aa12.42□□□□□ -0.42
UBC-208ENST00000540700 ODF3L2Q3SX64 289 aa12.42□□□□□ -0.42
UBC-208ENST00000540700 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.42□□□□□ -0.42
UBC-208ENST00000540700 SSX7Q7RTT5 188 aa12.42□□□□□ -0.42
UBC-208ENST00000540700 ZNF503Q96F45 646 aa12.42□□□□□ -0.42
UBC-208ENST00000540700 HELTA6NFD8 242 aa12.41□□□□□ -0.42
UBC-208ENST00000540700 M6PRP20645 277 aa12.41□□□□□ -0.42
UBC-208ENST00000540700 CD81P60033 236 aa12.41□□□□□ -0.42
UBC-208ENST00000540700 RPP25LQ8N5L8 163 aaKnown RBP12.41□□□□□ -0.42
UBC-208ENST00000540700 STOML3Q8TAV4 291 aa12.41□□□□□ -0.42
UBC-208ENST00000540700 GNPNAT1Q96EK6 184 aaPredicted RBP12.41□□□□□ -0.42
UBC-208ENST00000540700 NRN1Q9NPD7 142 aa12.41□□□□□ -0.42
UBC-208ENST00000540700 UBQLN2Q9UHD9 624 aa12.41□□□□□ -0.42
UBC-208ENST00000540700 PFDN2Q9UHV9 154 aa12.41□□□□□ -0.42
UBC-208ENST00000540700 FUT9Q9Y231 359 aa12.41□□□□□ -0.42
UBC-208ENST00000540700 H3BQ15 152 aa12.4□□□□□ -0.42
UBC-208ENST00000540700 H3BTX0 84 aa12.4□□□□□ -0.42
UBC-208ENST00000540700 CD5P06127 495 aa12.4□□□□□ -0.42
UBC-208ENST00000540700 IGLC2P0DOY2 106 aa12.4□□□□□ -0.42
UBC-208ENST00000540700 PYYP10082 97 aa12.4□□□□□ -0.42
UBC-208ENST00000540700 SERF2P84101 59 aa12.4□□□□□ -0.42
UBC-208ENST00000540700 ZNF726P1Q15940 193 aa12.4□□□□□ -0.42
UBC-208ENST00000540700 ZNF124Q15973 351 aa12.4□□□□□ -0.42
UBC-208ENST00000540700 ACOT6Q3I5F7 207 aaPredicted RBP12.4□□□□□ -0.42
UBC-208ENST00000540700 FAM122CQ6P4D5 195 aa12.4□□□□□ -0.42
UBC-208ENST00000540700 OR10G4Q8NGN3 311 aa12.4□□□□□ -0.42
UBC-208ENST00000540700 OR10G9Q8NGN4 311 aa12.4□□□□□ -0.42
UBC-208ENST00000540700 OR10G7Q8NGN6 311 aa12.4□□□□□ -0.42
UBC-208ENST00000540700 CITED4Q96RK1 184 aa12.4□□□□□ -0.42
UBC-208ENST00000540700 RPRMQ9NS64 109 aa12.4□□□□□ -0.42
UBC-208ENST00000540700 LYSTQ99698 3801 aa12.4□□□□□ -0.42
UBC-208ENST00000540700 A0A087X0K7 114 aa12.39□□□□□ -0.43
UBC-208ENST00000540700 TRAV2A0A0B4J234 112 aa12.39□□□□□ -0.43
UBC-208ENST00000540700 TRAV8-2A0A0B4J237 113 aa12.39□□□□□ -0.43
UBC-208ENST00000540700 RPL7P18124 248 aaKnown RBP12.39□□□□□ -0.43
UBC-208ENST00000540700 GALR1P47211 349 aa12.39□□□□□ -0.43
UBC-208ENST00000540700 IGFL4Q6B9Z1 124 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms