RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 TRBV9A0A0B4J1U6 114 aa11.22□□□□□ -0.61
INO80E-203ENST00000540562 WFDC3Q8IUB2 231 aa11.22□□□□□ -0.61
INO80E-203ENST00000540562 SCNM1Q9BWG6 230 aa11.22□□□□□ -0.61
INO80E-203ENST00000540562 SLC25A39Q9BZJ4 359 aaPredicted RBP11.22□□□□□ -0.61
INO80E-203ENST00000540562 RPP21Q9H633 154 aaKnown RBP11.22□□□□□ -0.61
INO80E-203ENST00000540562 GOLT1BQ9Y3E0 138 aa11.22□□□□□ -0.61
INO80E-203ENST00000540562 IGHV3-49A0A0A0MS15 119 aa11.22□□□□□ -0.61
INO80E-203ENST00000540562 BUB1B-PAK6H3BSN5 160 aa11.22□□□□□ -0.61
INO80E-203ENST00000540562 CCL21O00585 134 aa11.22□□□□□ -0.61
INO80E-203ENST00000540562 PRRX1P54821 245 aa11.22□□□□□ -0.61
INO80E-203ENST00000540562 DLX6P56179 175 aa11.22□□□□□ -0.61
INO80E-203ENST00000540562 LBHQ53QV2 105 aaPredicted RBP11.22□□□□□ -0.61
INO80E-203ENST00000540562 OR10J3Q5JRS4 329 aa11.22□□□□□ -0.61
INO80E-203ENST00000540562 ZC2HC1AQ96GY0 325 aa11.22□□□□□ -0.61
INO80E-203ENST00000540562 C20orf144Q9BQM9 153 aa11.22□□□□□ -0.61
INO80E-203ENST00000540562 C19orf24Q9BVV8 132 aa11.22□□□□□ -0.61
INO80E-203ENST00000540562 NDUFS7O75251 213 aa11.21□□□□□ -0.61
INO80E-203ENST00000540562 OR4B1Q8NGF8 309 aa11.21□□□□□ -0.61
INO80E-203ENST00000540562 TRAV9-1A0A075B6T8 112 aa11.21□□□□□ -0.62
INO80E-203ENST00000540562 FNDC10F2Z333 226 aa11.21□□□□□ -0.62
INO80E-203ENST00000540562 CACNA1AO00555 2505 aa11.21□□□□□ -0.62
INO80E-203ENST00000540562 POLQO75417 2590 aa11.21□□□□□ -0.62
INO80E-203ENST00000540562 IGLC2P0DOY2 106 aa11.21□□□□□ -0.62
INO80E-203ENST00000540562 IGLC3P0DOY3 106 aa11.21□□□□□ -0.62
INO80E-203ENST00000540562 GP9P14770 177 aa11.21□□□□□ -0.62
INO80E-203ENST00000540562 MC5RP33032 325 aa11.21□□□□□ -0.62
INO80E-203ENST00000540562 RBM14Q96PK6 669 aaKnown RBP11.21□□□□□ -0.62
INO80E-203ENST00000540562 SIAH2O43255 324 aa11.2□□□□□ -0.62
INO80E-203ENST00000540562 IGLL1P15814 213 aa11.2□□□□□ -0.62
INO80E-203ENST00000540562 HBBP68871 147 aa11.2□□□□□ -0.62
INO80E-203ENST00000540562 Q8TAT8 98 aa11.2□□□□□ -0.62
INO80E-203ENST00000540562 URB1-AS1Q96HZ7 61 aa11.2□□□□□ -0.62
INO80E-203ENST00000540562 C8orf49Q96NF6 230 aa11.2□□□□□ -0.62
INO80E-203ENST00000540562 ARMS2P0C7Q2 107 aa11.2□□□□□ -0.62
INO80E-203ENST00000540562 CA7P43166 264 aa11.2□□□□□ -0.62
INO80E-203ENST00000540562 NCOR1P1Q9H4R4 102 aa11.2□□□□□ -0.62
INO80E-203ENST00000540562 TEX22C9J3V5 150 aa11.2□□□□□ -0.62
INO80E-203ENST00000540562 IGLC1P0CG04 106 aa11.2□□□□□ -0.62
INO80E-203ENST00000540562 HTR1DP28221 377 aa11.2□□□□□ -0.62
INO80E-203ENST00000540562 ESDP10768 282 aa11.19□□□□□ -0.62
INO80E-203ENST00000540562 HLA-DMBP28068 263 aa11.19□□□□□ -0.62
INO80E-203ENST00000540562 ZNF672Q499Z4 452 aaPredicted RBP11.19□□□□□ -0.62
INO80E-203ENST00000540562 C5orf17Q8NAS9 161 aa11.19□□□□□ -0.62
INO80E-203ENST00000540562 F11RQ9Y624 299 aaKnown RBP11.19□□□□□ -0.62
INO80E-203ENST00000540562 DLEU1O43261 78 aa11.19□□□□□ -0.62
INO80E-203ENST00000540562 IGKV1-17P01599 117 aa11.19□□□□□ -0.62
INO80E-203ENST00000540562 APOBEC3AP31941 199 aaPredicted RBP11.19□□□□□ -0.62
INO80E-203ENST00000540562 LGALS7P47929 136 aa11.19□□□□□ -0.62
INO80E-203ENST00000540562 THAP8Q8NA92 274 aa11.19□□□□□ -0.62
INO80E-203ENST00000540562 LAMTOR2Q9Y2Q5 125 aa11.19□□□□□ -0.62
INO80E-203ENST00000540562 FAM106CPP0CH98 169 aa11.18□□□□□ -0.62
INO80E-203ENST00000540562 FAM106AQ4KMX7 169 aa11.18□□□□□ -0.62
INO80E-203ENST00000540562 TEX45Q8NA69 505 aa11.18□□□□□ -0.62
INO80E-203ENST00000540562 C7orf69Q9H7B7 122 aa11.18□□□□□ -0.62
INO80E-203ENST00000540562 UQCR10Q9UDW1 63 aa11.18□□□□□ -0.62
INO80E-203ENST00000540562 USP9YO00507 2555 aaPredicted RBP11.18□□□□□ -0.62
INO80E-203ENST00000540562 OR2T8A6NH00 312 aa11.18□□□□□ -0.62
INO80E-203ENST00000540562 ETFRF1Q6IPR1 90 aa11.18□□□□□ -0.62
INO80E-203ENST00000540562 TMEM75Q8N9X5 138 aa11.18□□□□□ -0.62
INO80E-203ENST00000540562 C8orf46Q8TAG6 207 aa11.18□□□□□ -0.62
INO80E-203ENST00000540562 CELSR2Q9HCU4 2923 aa11.18□□□□□ -0.62
INO80E-203ENST00000540562 UTP20O75691 2785 aaKnown RBP11.18□□□□□ -0.62
INO80E-203ENST00000540562 IGKV2-40A0A087WW87 121 aaPredicted RBP11.17□□□□□ -0.62
INO80E-203ENST00000540562 OR4C46A6NHA9 309 aa11.17□□□□□ -0.62
INO80E-203ENST00000540562 A8MWL6 223 aa11.17□□□□□ -0.62
INO80E-203ENST00000540562 IGKV2D-40P01614 121 aaPredicted RBP11.17□□□□□ -0.62
INO80E-203ENST00000540562 TMEM116Q8NCL8 245 aa11.17□□□□□ -0.62
INO80E-203ENST00000540562 ZFYVE26Q68DK2 2539 aa11.17□□□□□ -0.62
INO80E-203ENST00000540562 IGHV1-24A0A0C4DH33 117 aa11.17□□□□□ -0.62
INO80E-203ENST00000540562 GNG7O60262 68 aa11.17□□□□□ -0.62
INO80E-203ENST00000540562 IGLV1-47P01700 117 aa11.17□□□□□ -0.62
INO80E-203ENST00000540562 BTF3P20290 206 aaKnown RBP11.17□□□□□ -0.62
INO80E-203ENST00000540562 PPIFP30405 207 aaKnown RBP11.17□□□□□ -0.62
INO80E-203ENST00000540562 CTRLP40313 264 aa11.17□□□□□ -0.62
INO80E-203ENST00000540562 Q86TA4 180 aa11.17□□□□□ -0.62
INO80E-203ENST00000540562 TMUB1Q9BVT8 246 aa11.17□□□□□ -0.62
INO80E-203ENST00000540562 CHODLQ9H9P2 273 aa11.17□□□□□ -0.62
INO80E-203ENST00000540562 IGHV3OR16-10A0A075B7F0 116 aa11.17□□□□□ -0.62
INO80E-203ENST00000540562 SMKR1H3BMG3 65 aa11.17□□□□□ -0.62
INO80E-203ENST00000540562 OR2J3O76001 311 aa11.17□□□□□ -0.62
INO80E-203ENST00000540562 LEPROTL1O95214 131 aa11.17□□□□□ -0.62
INO80E-203ENST00000540562 MYCNOSP40205 109 aa11.17□□□□□ -0.62
INO80E-203ENST00000540562 NGBQ9NPG2 151 aa11.17□□□□□ -0.62
INO80E-203ENST00000540562 NOTCH3Q9UM47 2321 aa11.16□□□□□ -0.62
INO80E-203ENST00000540562 ZNF207O43670 478 aaKnown RBP11.16□□□□□ -0.62
INO80E-203ENST00000540562 COL5A1-AS1Q5SY13 56 aa11.16□□□□□ -0.62
INO80E-203ENST00000540562 ASCL5Q7RTU5 278 aa11.16□□□□□ -0.62
INO80E-203ENST00000540562 TMEM213A2RRL7 107 aa11.16□□□□□ -0.62
INO80E-203ENST00000540562 TSPOP30536 169 aa11.16□□□□□ -0.62
INO80E-203ENST00000540562 OR8B3Q8NGG8 313 aa11.16□□□□□ -0.62
INO80E-203ENST00000540562 TRGV9Q99603 122 aa11.16□□□□□ -0.62
INO80E-203ENST00000540562 SORL1Q92673 2214 aa11.16□□□□□ -0.62
INO80E-203ENST00000540562 TNFRSF13BO14836 293 aaPredicted RBP11.15□□□□□ -0.62
INO80E-203ENST00000540562 FOXE3Q13461 319 aa11.15□□□□□ -0.62
INO80E-203ENST00000540562 OR4A5Q8NH83 315 aa11.15□□□□□ -0.62
INO80E-203ENST00000540562 C2orf70A6NJV1 201 aa11.15□□□□□ -0.62
INO80E-203ENST00000540562 NDUFB8O95169 186 aa11.15□□□□□ -0.62
INO80E-203ENST00000540562 DYNAPQ8N1N2 210 aa11.15□□□□□ -0.62
INO80E-203ENST00000540562 OR8A1Q8NGG7 326 aa11.15□□□□□ -0.62
INO80E-203ENST00000540562 ZNF596Q8TC21 504 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms