RNA–Protein interactions for RNA: ENST00000540304.5

CLIP1-212, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5

Gene CLIP1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-212ENST00000540304 B4DEV8 164 aa7.68□□□□□ -1.18
CLIP1-212ENST00000540304 TEX22C9J3V5 150 aa7.68□□□□□ -1.18
CLIP1-212ENST00000540304 TAX1BP3O14907 124 aa7.68□□□□□ -1.18
CLIP1-212ENST00000540304 PRB1P04280 392 aa7.68□□□□□ -1.18
CLIP1-212ENST00000540304 LGALS4P56470 323 aa7.68□□□□□ -1.18
CLIP1-212ENST00000540304 CYP2G1PQ6ZSU1 146 aa7.68□□□□□ -1.18
CLIP1-212ENST00000540304 NPBQ8NG41 125 aa7.68□□□□□ -1.18
CLIP1-212ENST00000540304 SRSF12Q8WXF0 261 aaKnown RBP7.68□□□□□ -1.18
CLIP1-212ENST00000540304 TMEM37Q8WXS4 190 aa7.68□□□□□ -1.18
CLIP1-212ENST00000540304 DERL1Q9BUN8 251 aa7.68□□□□□ -1.18
CLIP1-212ENST00000540304 C19orf24Q9BVV8 132 aa7.68□□□□□ -1.18
CLIP1-212ENST00000540304 TSSC4Q9Y5U2 329 aaPredicted RBP7.68□□□□□ -1.18
CLIP1-212ENST00000540304 C11orf94C9JXX5 98 aa7.68□□□□□ -1.18
CLIP1-212ENST00000540304 NUPR1O60356 82 aa7.68□□□□□ -1.18
CLIP1-212ENST00000540304 FOXH1O75593 365 aa7.68□□□□□ -1.18
CLIP1-212ENST00000540304 NDUFA3O95167 84 aa7.68□□□□□ -1.18
CLIP1-212ENST00000540304 IGLC2P0DOY2 106 aa7.68□□□□□ -1.18
CLIP1-212ENST00000540304 IGLC3P0DOY3 106 aa7.68□□□□□ -1.18
CLIP1-212ENST00000540304 CTRLP40313 264 aa7.68□□□□□ -1.18
CLIP1-212ENST00000540304 SPATA45Q537H7 98 aa7.68□□□□□ -1.18
CLIP1-212ENST00000540304 FAM78BQ5VT40 261 aa7.68□□□□□ -1.18
CLIP1-212ENST00000540304 Q6ZWC4 215 aa7.68□□□□□ -1.18
CLIP1-212ENST00000540304 BBC3Q96PG8 261 aaPredicted RBP7.68□□□□□ -1.18
CLIP1-212ENST00000540304 SMIM7Q9BQ49 75 aa7.68□□□□□ -1.18
CLIP1-212ENST00000540304 SRSF8Q9BRL6 282 aaKnown RBP7.68□□□□□ -1.18
CLIP1-212ENST00000540304 LRRK2Q5S007 2527 aa7.68□□□□□ -1.18
CLIP1-212ENST00000540304 TRBV24-1A0A075B6N3 115 aa7.67□□□□□ -1.18
CLIP1-212ENST00000540304 FCN1O00602 326 aa7.67□□□□□ -1.18
CLIP1-212ENST00000540304 GATA2P23769 480 aaPredicted RBP7.67□□□□□ -1.18
CLIP1-212ENST00000540304 GCHFRP30047 84 aa7.67□□□□□ -1.18
CLIP1-212ENST00000540304 MFAP2P55001 183 aa7.67□□□□□ -1.18
CLIP1-212ENST00000540304 CST9LP1Q5W188 147 aa7.67□□□□□ -1.18
CLIP1-212ENST00000540304 TMEM256Q8N2U0 113 aa7.67□□□□□ -1.18
CLIP1-212ENST00000540304 THAP8Q8NA92 274 aa7.67□□□□□ -1.18
CLIP1-212ENST00000540304 OR2T10Q8NGZ9 312 aa7.67□□□□□ -1.18
CLIP1-212ENST00000540304 BLNKQ8WV28 456 aa7.67□□□□□ -1.18
CLIP1-212ENST00000540304 NPIPB3Q92617 1050 aa7.67□□□□□ -1.18
CLIP1-212ENST00000540304 TXNDC17Q9BRA2 123 aa7.67□□□□□ -1.18
CLIP1-212ENST00000540304 SRD5A3Q9H8P0 318 aa7.67□□□□□ -1.18
CLIP1-212ENST00000540304 SDF2L1Q9HCN8 221 aa7.67□□□□□ -1.18
CLIP1-212ENST00000540304 NAT8Q9UHE5 227 aa7.67□□□□□ -1.18
CLIP1-212ENST00000540304 F11RQ9Y624 299 aaKnown RBP7.67□□□□□ -1.18
CLIP1-212ENST00000540304 DOPEY1Q5JWR5 2465 aa7.67□□□□□ -1.18
CLIP1-212ENST00000540304 CD24P25063 80 aa7.67□□□□□ -1.18
CLIP1-212ENST00000540304 RND2P52198 227 aa7.67□□□□□ -1.18
CLIP1-212ENST00000540304 HES1Q14469 280 aa7.67□□□□□ -1.18
CLIP1-212ENST00000540304 MIR17HGQ75NE6 70 aa7.67□□□□□ -1.18
CLIP1-212ENST00000540304 DYNAPQ8N1N2 210 aa7.67□□□□□ -1.18
CLIP1-212ENST00000540304 PIMREGQ9BSJ6 248 aa7.67□□□□□ -1.18
CLIP1-212ENST00000540304 PARLQ9H300 379 aa7.67□□□□□ -1.18
CLIP1-212ENST00000540304 ABCA2Q9BZC7 2435 aa7.67□□□□□ -1.18
CLIP1-212ENST00000540304 POLQO75417 2590 aa7.67□□□□□ -1.18
CLIP1-212ENST00000540304 TCRBV4S1A1TA0A5B7 111 aa7.66□□□□□ -1.18
CLIP1-212ENST00000540304 TSPOP30536 169 aa7.66□□□□□ -1.18
CLIP1-212ENST00000540304 ATP5G3P48201 142 aa7.66□□□□□ -1.18
CLIP1-212ENST00000540304 UBE2E1P51965 193 aa7.66□□□□□ -1.18
CLIP1-212ENST00000540304 PSG9Q00887 426 aa7.66□□□□□ -1.18
CLIP1-212ENST00000540304 FAM168AQ92567 244 aa7.66□□□□□ -1.18
CLIP1-212ENST00000540304 TPPP3Q9BW30 176 aa7.66□□□□□ -1.18
CLIP1-212ENST00000540304 KRTAP3-3Q9BYR6 98 aa7.66□□□□□ -1.18
CLIP1-212ENST00000540304 KRTAP3-2Q9BYR7 98 aa7.66□□□□□ -1.18
CLIP1-212ENST00000540304 MRPL36Q9P0J6 103 aaKnown RBP7.66□□□□□ -1.18
CLIP1-212ENST00000540304 IGKV1D-37A0A075B6S9 117 aa7.66□□□□□ -1.18
CLIP1-212ENST00000540304 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.66□□□□□ -1.18
CLIP1-212ENST00000540304 IGLC1P0CG04 106 aa7.66□□□□□ -1.18
CLIP1-212ENST00000540304 RNF183Q96D59 192 aa7.66□□□□□ -1.18
CLIP1-212ENST00000540304 SLC25A33Q9BSK2 321 aa7.66□□□□□ -1.18
CLIP1-212ENST00000540304 MRPL32Q9BYC8 188 aaKnown RBP7.66□□□□□ -1.18
CLIP1-212ENST00000540304 TECRQ9NZ01 308 aaKnown RBP7.66□□□□□ -1.18
CLIP1-212ENST00000540304 PSMB11A5LHX3 300 aa7.65□□□□□ -1.18
CLIP1-212ENST00000540304 TAS2R45P59539 299 aa7.65□□□□□ -1.18
CLIP1-212ENST00000540304 EBI3Q14213 229 aa7.65□□□□□ -1.18
CLIP1-212ENST00000540304 ZNF843Q8N446 348 aa7.65□□□□□ -1.18
CLIP1-212ENST00000540304 OR4B1Q8NGF8 309 aa7.65□□□□□ -1.18
CLIP1-212ENST00000540304 IGHV3-21A0A0B4J1V1 117 aa7.65□□□□□ -1.18
CLIP1-212ENST00000540304 B5MCH6 92 aa7.65□□□□□ -1.18
CLIP1-212ENST00000540304 ZNF90Q03938 601 aa7.65□□□□□ -1.18
CLIP1-212ENST00000540304 FXYD3Q14802 87 aa7.65□□□□□ -1.18
CLIP1-212ENST00000540304 C5orf47Q569G3 176 aa7.65□□□□□ -1.18
CLIP1-212ENST00000540304 RUSC1-AS1Q66K80 236 aa7.65□□□□□ -1.18
CLIP1-212ENST00000540304 PQLC2Q6ZP29 291 aa7.65□□□□□ -1.18
CLIP1-212ENST00000540304 Q8N6K4 173 aa7.65□□□□□ -1.18
CLIP1-212ENST00000540304 TMEM116Q8NCL8 245 aa7.65□□□□□ -1.18
CLIP1-212ENST00000540304 OR1L4Q8NGR5 311 aa7.65□□□□□ -1.18
CLIP1-212ENST00000540304 C10orf105Q8TEF2 133 aa7.65□□□□□ -1.18
CLIP1-212ENST00000540304 TMEM167BQ9NRX6 74 aa7.65□□□□□ -1.18
CLIP1-212ENST00000540304 TRAV8-6A0A0B4J262 113 aa7.65□□□□□ -1.19
CLIP1-212ENST00000540304 CLDN34H7C241 214 aa7.65□□□□□ -1.19
CLIP1-212ENST00000540304 NPPCP23582 126 aa7.65□□□□□ -1.19
CLIP1-212ENST00000540304 NEGR1Q7Z3B1 354 aa7.65□□□□□ -1.19
CLIP1-212ENST00000540304 OR51G1Q8NGK1 321 aa7.65□□□□□ -1.19
CLIP1-212ENST00000540304 TRGV9Q99603 122 aa7.65□□□□□ -1.19
CLIP1-212ENST00000540304 TNFRSF19Q9NS68 423 aa7.65□□□□□ -1.19
CLIP1-212ENST00000540304 TMEM242Q9NWH2 141 aa7.65□□□□□ -1.19
CLIP1-212ENST00000540304 YTHDF2Q9Y5A9 579 aaKnown RBP7.65□□□□□ -1.19
CLIP1-212ENST00000540304 ARL2-SNX15V9GYD0 113 aa7.65□□□□□ -1.19
CLIP1-212ENST00000540304 VWC2LB2RUY7 222 aa7.64□□□□□ -1.19
CLIP1-212ENST00000540304 COX7A2P2O60397 106 aa7.64□□□□□ -1.19
CLIP1-212ENST00000540304 C8orf88P0DMB2 117 aa7.64□□□□□ -1.19
CLIP1-212ENST00000540304 HSD52Q0P140 79 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms