RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 NCR2O95944 276 aa16.14■□□□□ 0.17
TMEM260-203ENST00000539559 CRYGCP07315 174 aa16.14■□□□□ 0.17
TMEM260-203ENST00000539559 PPIAL4FP0DN26 164 aa16.14■□□□□ 0.17
TMEM260-203ENST00000539559 TRGV9Q99603 122 aa16.14■□□□□ 0.17
TMEM260-203ENST00000539559 MAP1LC3CQ9BXW4 147 aa16.14■□□□□ 0.17
TMEM260-203ENST00000539559 ACACAQ13085 2346 aa16.14■□□□□ 0.17
TMEM260-203ENST00000539559 HSBP1L1C9JCN9 74 aa16.14■□□□□ 0.17
TMEM260-203ENST00000539559 FAM106CPP0CH98 169 aa16.14■□□□□ 0.17
TMEM260-203ENST00000539559 TNFRSF1AP19438 455 aa16.14■□□□□ 0.17
TMEM260-203ENST00000539559 RPL27AP46776 148 aaKnown RBP16.14■□□□□ 0.17
TMEM260-203ENST00000539559 FAM106AQ4KMX7 169 aa16.14■□□□□ 0.17
TMEM260-203ENST00000539559 AMMECR1LQ6DCA0 310 aa16.14■□□□□ 0.17
TMEM260-203ENST00000539559 SRSF12Q8WXF0 261 aaKnown RBP16.14■□□□□ 0.17
TMEM260-203ENST00000539559 SCRT2Q9NQ03 307 aa16.14■□□□□ 0.17
TMEM260-203ENST00000539559 MSRB2Q9Y3D2 182 aa16.14■□□□□ 0.17
TMEM260-203ENST00000539559 ZGRF1Q86YA3 2104 aa16.14■□□□□ 0.17
TMEM260-203ENST00000539559 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.13■□□□□ 0.17
TMEM260-203ENST00000539559 NDUFB3O43676 98 aa16.13■□□□□ 0.17
TMEM260-203ENST00000539559 IGLV2-11P01706 119 aa16.13■□□□□ 0.17
TMEM260-203ENST00000539559 APOHP02749 345 aaPredicted RBP16.13■□□□□ 0.17
TMEM260-203ENST00000539559 ETFRF1Q6IPR1 90 aa16.13■□□□□ 0.17
TMEM260-203ENST00000539559 ZNF492Q9P255 531 aa16.13■□□□□ 0.17
TMEM260-203ENST00000539559 SH3BGRL2Q9UJC5 107 aa16.13■□□□□ 0.17
TMEM260-203ENST00000539559 PIEZO2Q9H5I5 2752 aa16.13■□□□□ 0.17
TMEM260-203ENST00000539559 C8orf46Q8TAG6 207 aa16.13■□□□□ 0.17
TMEM260-203ENST00000539559 IGFBPL1Q8WX77 278 aa16.13■□□□□ 0.17
TMEM260-203ENST00000539559 A0A1W2PRD5 423 aa16.12■□□□□ 0.17
TMEM260-203ENST00000539559 A0A1W2PRF3 423 aa16.12■□□□□ 0.17
TMEM260-203ENST00000539559 A0A1W2PRM7 423 aa16.12■□□□□ 0.17
TMEM260-203ENST00000539559 PRRG2O14669 202 aa16.12■□□□□ 0.17
TMEM260-203ENST00000539559 LIPFP07098 398 aa16.12■□□□□ 0.17
TMEM260-203ENST00000539559 LOXP28300 417 aaPredicted RBP16.12■□□□□ 0.17
TMEM260-203ENST00000539559 FXYD7P58549 80 aa16.12■□□□□ 0.17
TMEM260-203ENST00000539559 LDLRAD2Q5SZI1 272 aa16.12■□□□□ 0.17
TMEM260-203ENST00000539559 HIGD1AQ9Y241 93 aa16.12■□□□□ 0.17
TMEM260-203ENST00000539559 TMEM178BH3BS89 294 aa16.12■□□□□ 0.17
TMEM260-203ENST00000539559 OVOL3O00110 214 aa16.12■□□□□ 0.17
TMEM260-203ENST00000539559 RBP4P02753 201 aa16.12■□□□□ 0.17
TMEM260-203ENST00000539559 CT83Q5H943 113 aa16.12■□□□□ 0.17
TMEM260-203ENST00000539559 Q8NA96 180 aa16.12■□□□□ 0.17
TMEM260-203ENST00000539559 TMEM116Q8NCL8 245 aa16.12■□□□□ 0.17
TMEM260-203ENST00000539559 NDFIP1Q9BT67 221 aa16.12■□□□□ 0.17
TMEM260-203ENST00000539559 S4R3C0 116 aa16.12■□□□□ 0.17
TMEM260-203ENST00000539559 TRAV30A0A087WSZ9 112 aa16.11■□□□□ 0.17
TMEM260-203ENST00000539559 FAM162BQ5T6X4 162 aa16.11■□□□□ 0.17
TMEM260-203ENST00000539559 NEU4Q8WWR8 484 aaPredicted RBP16.11■□□□□ 0.17
TMEM260-203ENST00000539559 SLC25A39Q9BZJ4 359 aaPredicted RBP16.11■□□□□ 0.17
TMEM260-203ENST00000539559 BSPH1Q075Z2 132 aa16.11■□□□□ 0.17
TMEM260-203ENST00000539559 SMIM12Q96EX1 92 aa16.11■□□□□ 0.17
TMEM260-203ENST00000539559 CEP295Q9C0D2 2601 aa16.1■□□□□ 0.17
TMEM260-203ENST00000539559 CDKN1BP46527 198 aa16.1■□□□□ 0.17
TMEM260-203ENST00000539559 ARF6P62330 175 aa16.1■□□□□ 0.17
TMEM260-203ENST00000539559 LOXL1Q08397 574 aaPredicted RBP16.1■□□□□ 0.17
TMEM260-203ENST00000539559 DEFB125Q8N687 156 aa16.1■□□□□ 0.17
TMEM260-203ENST00000539559 FBXL15Q9H469 300 aa16.1■□□□□ 0.17
TMEM260-203ENST00000539559 C1RLQ9NZP8 487 aa16.1■□□□□ 0.17
TMEM260-203ENST00000539559 LOC389332A0A1B0GUA5 103 aa16.1■□□□□ 0.17
TMEM260-203ENST00000539559 NPIPB6E9PJ23 425 aa16.1■□□□□ 0.17
TMEM260-203ENST00000539559 OR5AL1P0C617 328 aa16.1■□□□□ 0.17
TMEM260-203ENST00000539559 C3orf36Q3SXR2 165 aa16.1■□□□□ 0.17
TMEM260-203ENST00000539559 SOX21Q9Y651 276 aaPredicted RBP16.1■□□□□ 0.17
TMEM260-203ENST00000539559 TMSB15BA0A087X1C1 80 aa16.09■□□□□ 0.17
TMEM260-203ENST00000539559 IGHV1-8P0DP01 117 aa16.09■□□□□ 0.17
TMEM260-203ENST00000539559 GFRA4Q9GZZ7 299 aa16.09■□□□□ 0.17
TMEM260-203ENST00000539559 LRBAP50851 2863 aa16.09■□□□□ 0.17
TMEM260-203ENST00000539559 TRAV8-6A0A0B4J262 113 aa16.09■□□□□ 0.17
TMEM260-203ENST00000539559 HAX1O00165 279 aa16.09■□□□□ 0.17
TMEM260-203ENST00000539559 TMEM108Q6UXF1 575 aa16.09■□□□□ 0.17
TMEM260-203ENST00000539559 GFRALQ6UXV0 394 aa16.09■□□□□ 0.17
TMEM260-203ENST00000539559 IGLC1P0CG04 106 aa16.08■□□□□ 0.16
TMEM260-203ENST00000539559 DLX6P56179 175 aa16.08■□□□□ 0.16
TMEM260-203ENST00000539559 PSG9Q00887 426 aa16.08■□□□□ 0.16
TMEM260-203ENST00000539559 OTORQ9NRC9 128 aa16.08■□□□□ 0.16
TMEM260-203ENST00000539559 SIGLEC9Q9Y336 463 aa16.08■□□□□ 0.16
TMEM260-203ENST00000539559 BSNQ9UPA5 3926 aa16.08■□□□□ 0.16
TMEM260-203ENST00000539559 A0A1B0GUT8 65 aa16.08■□□□□ 0.16
TMEM260-203ENST00000539559 M0R3E3 92 aa16.08■□□□□ 0.16
TMEM260-203ENST00000539559 PET117Q6UWS5 81 aa16.08■□□□□ 0.16
TMEM260-203ENST00000539559 HLA-DRB1P01911 266 aa16.07■□□□□ 0.16
TMEM260-203ENST00000539559 UQCRFS1P47985 274 aa16.07■□□□□ 0.16
TMEM260-203ENST00000539559 BCL6BQ8N143 479 aaPredicted RBP16.07■□□□□ 0.16
TMEM260-203ENST00000539559 OR8A1Q8NGG7 326 aa16.07■□□□□ 0.16
TMEM260-203ENST00000539559 AP5S1Q9NUS5 200 aa16.07■□□□□ 0.16
TMEM260-203ENST00000539559 DCHS2Q6V1P9 2916 aa16.07■□□□□ 0.16
TMEM260-203ENST00000539559 MC5RP33032 325 aa16.07■□□□□ 0.16
TMEM260-203ENST00000539559 CRIP1P50238 77 aa16.07■□□□□ 0.16
TMEM260-203ENST00000539559 LINC00311Q8N616 119 aa16.07■□□□□ 0.16
TMEM260-203ENST00000539559 TMEM133Q9H2Q1 129 aa16.07■□□□□ 0.16
TMEM260-203ENST00000539559 CST9LQ9H4G1 147 aa16.07■□□□□ 0.16
TMEM260-203ENST00000539559 HSPB8Q9UJY1 196 aa16.07■□□□□ 0.16
TMEM260-203ENST00000539559 TEX22C9J3V5 150 aa16.06■□□□□ 0.16
TMEM260-203ENST00000539559 IFI27P40305 119 aaPredicted RBP16.06■□□□□ 0.16
TMEM260-203ENST00000539559 LGALS7P47929 136 aa16.06■□□□□ 0.16
TMEM260-203ENST00000539559 RHOGP84095 191 aa16.06■□□□□ 0.16
TMEM260-203ENST00000539559 NUP37Q8NFH4 326 aa16.06■□□□□ 0.16
TMEM260-203ENST00000539559 PRSS3P2Q8NHM4 247 aa16.06■□□□□ 0.16
TMEM260-203ENST00000539559 NAA38Q9BRA0 125 aaKnown RBP16.06■□□□□ 0.16
TMEM260-203ENST00000539559 F11RQ9Y624 299 aaKnown RBP16.06■□□□□ 0.16
TMEM260-203ENST00000539559 A0A0G2JNJ9 132 aa16.06■□□□□ 0.16
TMEM260-203ENST00000539559 SERTM2A0A1B0GWG4 89 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms