RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 ZNF705AQ6ZN79 300 aaPredicted RBP11.59□□□□□ -0.55
CDCA3-207ENST00000538862 Q8N976 141 aa11.59□□□□□ -0.55
CDCA3-207ENST00000538862 OR4B1Q8NGF8 309 aa11.59□□□□□ -0.55
CDCA3-207ENST00000538862 GPR82Q96P67 336 aa11.59□□□□□ -0.55
CDCA3-207ENST00000538862 INSIG2Q9Y5U4 225 aa11.59□□□□□ -0.55
CDCA3-207ENST00000538862 PLXNB1O43157 2135 aa11.59□□□□□ -0.55
CDCA3-207ENST00000538862 IGHV1-3A0A0C4DH29 117 aa11.58□□□□□ -0.55
CDCA3-207ENST00000538862 RBP4P02753 201 aa11.58□□□□□ -0.55
CDCA3-207ENST00000538862 KRTDAPP60985 99 aa11.58□□□□□ -0.55
CDCA3-207ENST00000538862 GNG5P63218 68 aa11.58□□□□□ -0.55
CDCA3-207ENST00000538862 RUSC1-AS1Q66K80 236 aa11.58□□□□□ -0.55
CDCA3-207ENST00000538862 C19orf35Q6ZS72 473 aa11.58□□□□□ -0.55
CDCA3-207ENST00000538862 C5orf17Q8NAS9 161 aa11.58□□□□□ -0.55
CDCA3-207ENST00000538862 ATG101Q9BSB4 218 aa11.58□□□□□ -0.55
CDCA3-207ENST00000538862 MLST8Q9BVC4 326 aa11.58□□□□□ -0.55
CDCA3-207ENST00000538862 F11RQ9Y624 299 aaKnown RBP11.58□□□□□ -0.55
CDCA3-207ENST00000538862 DIRC3C9JPN6 131 aa11.58□□□□□ -0.56
CDCA3-207ENST00000538862 BUB1B-PAK6H3BSN5 160 aa11.58□□□□□ -0.56
CDCA3-207ENST00000538862 OR2J3O76001 311 aa11.58□□□□□ -0.56
CDCA3-207ENST00000538862 RPLP1P05386 114 aaKnown RBP11.58□□□□□ -0.56
CDCA3-207ENST00000538862 CD3EP07766 207 aa11.58□□□□□ -0.56
CDCA3-207ENST00000538862 PPP1R27Q86WC6 154 aa11.58□□□□□ -0.56
CDCA3-207ENST00000538862 C18orf32Q8TCD1 76 aa11.58□□□□□ -0.56
CDCA3-207ENST00000538862 BLNKQ8WV28 456 aa11.58□□□□□ -0.56
CDCA3-207ENST00000538862 FMC1Q96HJ9 113 aa11.58□□□□□ -0.56
CDCA3-207ENST00000538862 RNF5Q99942 180 aa11.58□□□□□ -0.56
CDCA3-207ENST00000538862 CLEC7AQ9BXN2 247 aa11.58□□□□□ -0.56
CDCA3-207ENST00000538862 PAM16Q9Y3D7 125 aa11.58□□□□□ -0.56
CDCA3-207ENST00000538862 RNF114Q9Y508 228 aa11.58□□□□□ -0.56
CDCA3-207ENST00000538862 TEP1Q99973 2627 aaKnown RBP11.58□□□□□ -0.56
CDCA3-207ENST00000538862 HIGD1CA8MV81 97 aa11.57□□□□□ -0.56
CDCA3-207ENST00000538862 TOMM40O96008 361 aa11.57□□□□□ -0.56
CDCA3-207ENST00000538862 GP9P14770 177 aa11.57□□□□□ -0.56
CDCA3-207ENST00000538862 PMCHP20382 165 aa11.57□□□□□ -0.56
CDCA3-207ENST00000538862 CNTFRP26992 372 aa11.57□□□□□ -0.56
CDCA3-207ENST00000538862 KLF5Q13887 457 aaPredicted RBP11.57□□□□□ -0.56
CDCA3-207ENST00000538862 CT83Q5H943 113 aa11.57□□□□□ -0.56
CDCA3-207ENST00000538862 ZNF841Q6ZN19 808 aa11.57□□□□□ -0.56
CDCA3-207ENST00000538862 VPS13CQ709C8 3753 aa11.57□□□□□ -0.56
CDCA3-207ENST00000538862 TEX22C9J3V5 150 aa11.56□□□□□ -0.56
CDCA3-207ENST00000538862 PPBPP02775 128 aa11.56□□□□□ -0.56
CDCA3-207ENST00000538862 PRR27Q6MZM9 219 aa11.56□□□□□ -0.56
CDCA3-207ENST00000538862 NIT1Q86X76 327 aa11.56□□□□□ -0.56
CDCA3-207ENST00000538862 TMEM190Q8WZ59 177 aa11.56□□□□□ -0.56
CDCA3-207ENST00000538862 PRSS22Q9GZN4 317 aa11.56□□□□□ -0.56
CDCA3-207ENST00000538862 MALRD1Q5VYJ5 2156 aa11.56□□□□□ -0.56
CDCA3-207ENST00000538862 LTAP01374 205 aa11.56□□□□□ -0.56
CDCA3-207ENST00000538862 GDF5OSQ5U4N7 250 aa11.56□□□□□ -0.56
CDCA3-207ENST00000538862 SRSF8Q9BRL6 282 aaKnown RBP11.56□□□□□ -0.56
CDCA3-207ENST00000538862 TMEM14CQ9P0S9 112 aa11.56□□□□□ -0.56
CDCA3-207ENST00000538862 ZNF492Q9P255 531 aa11.56□□□□□ -0.56
CDCA3-207ENST00000538862 HIGD1AQ9Y241 93 aa11.56□□□□□ -0.56
CDCA3-207ENST00000538862 PRRC2AP48634 2157 aaKnown RBP11.55□□□□□ -0.56
CDCA3-207ENST00000538862 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.55□□□□□ -0.56
CDCA3-207ENST00000538862 A0A1B0GXF2 115 aa11.55□□□□□ -0.56
CDCA3-207ENST00000538862 Q9H3A6 140 aa11.55□□□□□ -0.56
CDCA3-207ENST00000538862 SOX21Q9Y651 276 aaPredicted RBP11.55□□□□□ -0.56
CDCA3-207ENST00000538862 F8P00451 2351 aa11.55□□□□□ -0.56
CDCA3-207ENST00000538862 A8MWL6 223 aa11.54□□□□□ -0.56
CDCA3-207ENST00000538862 TCRAP04437 139 aa11.54□□□□□ -0.56
CDCA3-207ENST00000538862 C3orf79P0CE67 100 aa11.54□□□□□ -0.56
CDCA3-207ENST00000538862 CTRLP40313 264 aa11.54□□□□□ -0.56
CDCA3-207ENST00000538862 ASPHD1Q5U4P2 390 aa11.54□□□□□ -0.56
CDCA3-207ENST00000538862 RPEQ96AT9 228 aa11.54□□□□□ -0.56
CDCA3-207ENST00000538862 BORCS7Q96B45 105 aa11.54□□□□□ -0.56
CDCA3-207ENST00000538862 ALKBH7Q9BT30 221 aaPredicted RBP11.54□□□□□ -0.56
CDCA3-207ENST00000538862 GFRA4Q9GZZ7 299 aa11.54□□□□□ -0.56
CDCA3-207ENST00000538862 RPP21Q9H633 154 aaKnown RBP11.54□□□□□ -0.56
CDCA3-207ENST00000538862 ITPR3Q14573 2671 aa11.54□□□□□ -0.56
CDCA3-207ENST00000538862 PPIAL4CA0A0B4J2A2 164 aa11.54□□□□□ -0.56
CDCA3-207ENST00000538862 C19orf71A6NCJ1 209 aa11.54□□□□□ -0.56
CDCA3-207ENST00000538862 LY6LH3BQJ8 138 aa11.54□□□□□ -0.56
CDCA3-207ENST00000538862 IGLC1P0CG04 106 aa11.54□□□□□ -0.56
CDCA3-207ENST00000538862 PPIAL4GP0DN37 164 aa11.54□□□□□ -0.56
CDCA3-207ENST00000538862 MMDQ15546 238 aa11.54□□□□□ -0.56
CDCA3-207ENST00000538862 DMRTA1Q5VZB9 504 aa11.54□□□□□ -0.56
CDCA3-207ENST00000538862 SRSF12Q8WXF0 261 aaKnown RBP11.54□□□□□ -0.56
CDCA3-207ENST00000538862 OTORQ9NRC9 128 aa11.54□□□□□ -0.56
CDCA3-207ENST00000538862 HIVEP1P15822 2718 aa11.54□□□□□ -0.56
CDCA3-207ENST00000538862 IGHV3-21A0A0B4J1V1 117 aa11.53□□□□□ -0.56
CDCA3-207ENST00000538862 VWC2LB2RUY7 222 aa11.53□□□□□ -0.56
CDCA3-207ENST00000538862 I3L2K1 104 aa11.53□□□□□ -0.56
CDCA3-207ENST00000538862 K7EP13 123 aa11.53□□□□□ -0.56
CDCA3-207ENST00000538862 APELAP0DMC3 54 aa11.53□□□□□ -0.56
CDCA3-207ENST00000538862 PSG1P11464 419 aa11.53□□□□□ -0.56
CDCA3-207ENST00000538862 FAM162BQ5T6X4 162 aa11.53□□□□□ -0.56
CDCA3-207ENST00000538862 FAM19A2Q8N3H0 131 aa11.53□□□□□ -0.56
CDCA3-207ENST00000538862 FBXL15Q9H469 300 aa11.53□□□□□ -0.56
CDCA3-207ENST00000538862 FAM231BA6NCW3 169 aa11.52□□□□□ -0.56
CDCA3-207ENST00000538862 P01737 135 aa11.52□□□□□ -0.56
CDCA3-207ENST00000538862 HBBP68871 147 aa11.52□□□□□ -0.56
CDCA3-207ENST00000538862 MUC15Q8N387 334 aa11.52□□□□□ -0.56
CDCA3-207ENST00000538862 SGK494Q96LW2 274 aa11.52□□□□□ -0.56
CDCA3-207ENST00000538862 SLC25A39Q9BZJ4 359 aaPredicted RBP11.52□□□□□ -0.56
CDCA3-207ENST00000538862 RPH3ALQ9UNE2 315 aa11.52□□□□□ -0.56
CDCA3-207ENST00000538862 ZNF469Q96JG9 3925 aaPredicted RBP11.52□□□□□ -0.56
CDCA3-207ENST00000538862 HSBP1O75506 76 aa11.52□□□□□ -0.57
CDCA3-207ENST00000538862 NTF3P20783 257 aa11.52□□□□□ -0.57
CDCA3-207ENST00000538862 CAMPP49913 170 aa11.52□□□□□ -0.57
CDCA3-207ENST00000538862 DLX1P56177 255 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms